Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8n17
(345 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P08358 Cluster: Protein p26; n=9; Nucleopolyhedrovirus|... 186 9e-47
UniRef50_P11037 Cluster: Protein p26; n=8; Nucleopolyhedrovirus|... 92 3e-18
UniRef50_Q80LR5 Cluster: P26; n=4; Nucleopolyhedrovirus|Rep: P26... 60 8e-09
UniRef50_Q5EFK2 Cluster: P26; n=1; Clanis bilineata nucleopolyhe... 57 9e-08
UniRef50_O55400 Cluster: P26; n=1; Buzura suppressaria NPV|Rep: ... 54 5e-07
UniRef50_Q4KT61 Cluster: P26; n=5; Nucleopolyhedrovirus|Rep: P26... 50 1e-05
UniRef50_Q9IBR1 Cluster: ORF129 p26; n=2; Nucleopolyhedrovirus|R... 47 7e-05
UniRef50_Q77K96 Cluster: P26; n=3; Nucleopolyhedrovirus|Rep: P26... 46 1e-04
UniRef50_Q8B4A2 Cluster: P26; n=1; Bombyx mori NPV|Rep: P26 - Bo... 40 0.009
UniRef50_Q0IL99 Cluster: P26; n=1; Leucania separata nuclear pol... 33 0.98
UniRef50_A0EYS1 Cluster: P26-a; n=1; Ecotropis obliqua NPV|Rep: ... 33 1.3
UniRef50_Q5CKB9 Cluster: Putative uncharacterized protein; n=2; ... 33 1.7
UniRef50_A4JYK0 Cluster: Si:dkey-24p1.1; n=3; Danio rerio|Rep: S... 32 2.3
UniRef50_Q74ZX0 Cluster: Protein CSF1; n=1; Eremothecium gossypi... 32 2.3
UniRef50_UPI00015B6255 Cluster: PREDICTED: similar to GA21569-PA... 32 3.0
UniRef50_Q4Q5G1 Cluster: Putative uncharacterized protein; n=3; ... 32 3.0
UniRef50_Q6H0Z5 Cluster: Putative uncharacterized protein; n=1; ... 31 4.0
UniRef50_Q1PV54 Cluster: Strongly similar to 1-deoxy-D-xylulose ... 31 5.3
UniRef50_Q2NI66 Cluster: Putative uncharacterized protein; n=1; ... 31 5.3
UniRef50_Q5SHY6 Cluster: Serine/threonine protein kinase; n=2; T... 31 6.9
UniRef50_Q05040 Cluster: Factor arrest protein 8; n=2; Saccharom... 31 6.9
UniRef50_UPI0000DB79E6 Cluster: PREDICTED: similar to CG32708-PA... 30 9.2
UniRef50_A6WFU2 Cluster: Integral membrane sensor signal transdu... 30 9.2
UniRef50_A6BI77 Cluster: Putative uncharacterized protein; n=1; ... 30 9.2
UniRef50_Q54TM2 Cluster: Putative uncharacterized protein; n=1; ... 30 9.2
UniRef50_P32053 Cluster: Prophage CP4-57 integrase; n=24; Gammap... 30 9.2
>UniRef50_P08358 Cluster: Protein p26; n=9;
Nucleopolyhedrovirus|Rep: Protein p26 - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 240
Score = 186 bits (453), Expect = 9e-47
Identities = 86/93 (92%), Positives = 90/93 (96%)
Frame = +1
Query: 4 EASRLSGHIKVPNGVRVEKLRPNMSVYGTVQLPYDKIKRHALEQENKTPNALESCVLFYK 183
EAS+LSGH+KV NGVRVEK RPNMSVYGTVQLPYDKIK+HALEQENKTPNALESCVLFYK
Sbjct: 148 EASQLSGHMKVLNGVRVEKWRPNMSVYGTVQLPYDKIKQHALEQENKTPNALESCVLFYK 207
Query: 184 DSEIRITYNRGDYEIMHLRMSGPLIQPNTIYYS 282
DSEIRITYN+GDYEIMHLRM GPLIQPNTIYYS
Sbjct: 208 DSEIRITYNKGDYEIMHLRMPGPLIQPNTIYYS 240
>UniRef50_P11037 Cluster: Protein p26; n=8;
Nucleopolyhedrovirus|Rep: Protein p26 - Orgyia
pseudotsugata multicapsid polyhedrosis virus (OpMNPV)
Length = 230
Score = 91.9 bits (218), Expect = 3e-18
Identities = 39/84 (46%), Positives = 56/84 (66%)
Frame = +1
Query: 7 ASRLSGHIKVPNGVRVEKLRPNMSVYGTVQLPYDKIKRHALEQENKTPNALESCVLFYKD 186
A ++SGH + +R SVYG VQLPY+++K HA + +A ESC LFY D
Sbjct: 142 AGQVSGHARQQRRGAGRTVRAGRSVYGPVQLPYEQLKAHAFRKRRPRRDAAESCALFYND 201
Query: 187 SEIRITYNRGDYEIMHLRMSGPLI 258
SE+RIT+N+G++E+MH R+ GPL+
Sbjct: 202 SEVRITFNKGEFELMHWRLPGPLV 225
>UniRef50_Q80LR5 Cluster: P26; n=4; Nucleopolyhedrovirus|Rep: P26 -
Adoxophyes honmai nucleopolyhedrovirus
Length = 268
Score = 60.5 bits (140), Expect = 8e-09
Identities = 34/88 (38%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Frame = +1
Query: 16 LSGHIKVPNGVRVEKLRPNMSVYGTVQLPYDKIKRHALE-QENKT--PNALESCVLFYKD 186
+SG + + V + MSVYG QLPY +KRHA+ NK N S +FY D
Sbjct: 176 VSGQFNFDDQIIVTQFVKGMSVYGKRQLPYMALKRHAINISANKKLYRNMPRSVAVFYND 235
Query: 187 SEIRITYNRGDYEIMHLRMSGPLIQPNT 270
+I I G+YEI +R++GPL+ +T
Sbjct: 236 RDITIALVEGEYEIDRIRLNGPLLAGHT 263
>UniRef50_Q5EFK2 Cluster: P26; n=1; Clanis bilineata
nucleopolyhedrosis virus|Rep: P26 - Clanis bilineata
nucleopolyhedrosis virus
Length = 287
Score = 56.8 bits (131), Expect = 9e-08
Identities = 35/97 (36%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Frame = +1
Query: 7 ASRLSGHIKVPNGVRVEKLRPNMSVYGTVQLPYD--------KIKRHALEQENKT---PN 153
A +SG I + V V++L+P +SVYG QLPY IKR A+ +N +
Sbjct: 189 AGLVSGQINYDDNVTVQQLKPGLSVYGRRQLPYKSNEALGQANIKRFAISTQNNRLAYRD 248
Query: 154 ALESCVLFYKDSEIRITYNRGDYEIMHLRMSGPLIQP 264
+ V F+ I IT N ++EI R GPLI P
Sbjct: 249 MPRNVVFFHDQHNITITINENEFEIARFRFDGPLILP 285
>UniRef50_O55400 Cluster: P26; n=1; Buzura suppressaria NPV|Rep: P26
- Buzura suppressaria nuclear polyhedrosis virus (BsNPV)
Length = 263
Score = 54.4 bits (125), Expect = 5e-07
Identities = 29/79 (36%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
Frame = +1
Query: 40 NGVRVEKLRPNMSVYGTVQLPYDK-IKRHALEQENKTPNALE---SCVLFYKDSEIRITY 207
N V+V +L+P MSVYG QLPY +K+ A+ N + + ++Y +S+I I+
Sbjct: 182 NIVKVTRLQPGMSVYGRNQLPYSLGVKQLAMSAYNNRQMYRDWPRTVFVYYNESDIIISL 241
Query: 208 NRGDYEIMHLRMSGPLIQP 264
G++EI +R GPL++P
Sbjct: 242 VEGEFEISRVRFQGPLVEP 260
>UniRef50_Q4KT61 Cluster: P26; n=5; Nucleopolyhedrovirus|Rep: P26 -
Chrysodeixis chalcites nucleopolyhedrovirus
Length = 299
Score = 49.6 bits (113), Expect = 1e-05
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 7/90 (7%)
Frame = +1
Query: 16 LSGHIKVPNGVRVEKLRPNMSVYGTVQL----PYDKIKRHALEQE-NKTP--NALESCVL 174
+SG I + V V LR MSVYG Q+ PY +K+ AL N+ + + +
Sbjct: 209 VSGQINYDSTVYVSLLRNGMSVYGKRQMAYSSPYMTVKKFALSTTANRLTYRDLPRNIAI 268
Query: 175 FYKDSEIRITYNRGDYEIMHLRMSGPLIQP 264
F+ EI I+ G+YEI +R+ GPLI P
Sbjct: 269 FHNKKEISISLVEGEYEIDRIRLDGPLIVP 298
>UniRef50_Q9IBR1 Cluster: ORF129 p26; n=2; Nucleopolyhedrovirus|Rep:
ORF129 p26 - Spodoptera exigua MNPV
Length = 278
Score = 47.2 bits (107), Expect = 7e-05
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Frame = +1
Query: 7 ASRLSGHIKVPNGVRVEKLRPNMSVYGTVQLPYDKIKRHALE-------QENKTPNALES 165
A +SG + + V V+KL+ +M+VYG QLPY A + +
Sbjct: 171 AGLISGQMMFDDRVIVKKLKADMAVYGRQQLPYSSAHMSAKQFAMAATVNRQLYRDLPRY 230
Query: 166 CVLFYKDSEIRITYNRGDYEIMHLRMSGPLI 258
V+F+ +++I IT G++E+ +R+ GPLI
Sbjct: 231 AVVFHNNTDITITMVEGEFEMYRVRLDGPLI 261
>UniRef50_Q77K96 Cluster: P26; n=3; Nucleopolyhedrovirus|Rep: P26 -
Helicoverpa armigera NPV
Length = 267
Score = 46.4 bits (105), Expect = 1e-04
Identities = 35/92 (38%), Positives = 48/92 (52%), Gaps = 11/92 (11%)
Frame = +1
Query: 16 LSGHIKVP--NGVRVEKLRPNMSVYGTVQ---LPYDK---IKRHALEQ-ENKTP--NALE 162
+SG I+ NGV E+L SVYG Q LP ++ IK AL N+ N
Sbjct: 174 VSGQIQFDSNNGVTPERLLTGRSVYGRRQMSYLPNERSVGIKEFALTSVANRATFRNLTR 233
Query: 163 SCVLFYKDSEIRITYNRGDYEIMHLRMSGPLI 258
+ +FY D EI IT + G++EI +R GPL+
Sbjct: 234 NVHIFYNDDEIVITLSEGEFEISRIRFDGPLL 265
>UniRef50_Q8B4A2 Cluster: P26; n=1; Bombyx mori NPV|Rep: P26 -
Bombyx mori nuclear polyhedrosis virus (BmNPV)
Length = 41
Score = 40.3 bits (90), Expect = 0.009
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +3
Query: 3 RSVSAVGTHKGAERRPC 53
RSVSAVGTHKGAERRPC
Sbjct: 25 RSVSAVGTHKGAERRPC 41
>UniRef50_Q0IL99 Cluster: P26; n=1; Leucania separata nuclear
polyhedrosis virus|Rep: P26 - Leucania separata nuclear
polyhedrosis virus (LsNPV)
Length = 256
Score = 33.5 bits (73), Expect = 0.98
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Frame = +1
Query: 16 LSGHIKVPNGVRVEKLRP-NMSVYGTVQLPYDKIKRHALE-QENKTPNALESCVLFYKDS 189
+SG I++ +++ R + SVYG Y IK+ A++ NK+ + E +
Sbjct: 165 VSGQIEIDGEYVIQRQRTADTSVYGRKVATYADIKKFAIDCNVNKSAHRNEPRAFIVTEG 224
Query: 190 E----IRITYNRGDYEIMHLRMSGPLIQPN 267
+ I I +EI +RMSG L+ N
Sbjct: 225 DGNNTITIALVENQFEIFRVRMSGSLVAQN 254
>UniRef50_A0EYS1 Cluster: P26-a; n=1; Ecotropis obliqua NPV|Rep:
P26-a - Ecotropis obliqua NPV
Length = 300
Score = 33.1 bits (72), Expect = 1.3
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 15/96 (15%)
Frame = +1
Query: 16 LSGHIKVPNG---VRVEKLRPNMSVYGTVQLP------YD---KIKR---HALEQENKTP 150
+SG I+ N ++VEK M +YG QLP YD I+R A+
Sbjct: 195 ISGQIQYDNNAGPIKVEKFDSTMHIYGKKQLPVRSIDGYDNVLNIRRFYMSAMANRQMYR 254
Query: 151 NALESCVLFYKDSEIRITYNRGDYEIMHLRMSGPLI 258
+ S +F+ + + I G+++I+ + GPLI
Sbjct: 255 DWPRSISIFHDSNFVSIGLVEGEFQILQIEFEGPLI 290
>UniRef50_Q5CKB9 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium hominis
Length = 388
Score = 32.7 bits (71), Expect = 1.7
Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = +1
Query: 73 MSVYGTVQLPYDK---IKRHALEQENKTPNALESCVLFYKDSEIRITYNRGDYEIMHLRM 243
+ YGT+ +P ++ K +L ++ ES F +SEI++T + +++ H R
Sbjct: 101 LDYYGTLFIPSEQDLSSKIDSLRTQDTIHGNYESNRRFINNSEIKVTKDNNGFDVFHKRK 160
Query: 244 SGPLI 258
+ PL+
Sbjct: 161 NAPLL 165
>UniRef50_A4JYK0 Cluster: Si:dkey-24p1.1; n=3; Danio rerio|Rep:
Si:dkey-24p1.1 - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 1043
Score = 32.3 bits (70), Expect = 2.3
Identities = 14/31 (45%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Frame = +1
Query: 64 RPNM-SVYGTVQLPYDKIKRHALEQENKTPN 153
+PN+ +VY ++LP K KRH+ +Q+ KT N
Sbjct: 894 KPNIQTVYAAIKLPQKKQKRHSPKQQQKTGN 924
>UniRef50_Q74ZX0 Cluster: Protein CSF1; n=1; Eremothecium
gossypii|Rep: Protein CSF1 - Ashbya gossypii (Yeast)
(Eremothecium gossypii)
Length = 2887
Score = 32.3 bits (70), Expect = 2.3
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = -1
Query: 216 PPVVSD-AYF*IFVK*HTRLQRVWRFIFLLERMPFNFIVRQLHSPVNRHVGSQFFNT 49
PPV++ A F H R WR I L + N++ ++ H RH+G+Q F +
Sbjct: 1356 PPVITKPANITRFSNRHIRSAESWRIIMRLRHI-LNYLPQEWHQSFTRHLGTQDFTS 1411
>UniRef50_UPI00015B6255 Cluster: PREDICTED: similar to GA21569-PA;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
GA21569-PA - Nasonia vitripennis
Length = 4465
Score = 31.9 bits (69), Expect = 3.0
Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +1
Query: 40 NGVRVEKL-RPNMSVYGTVQLPYDKIKRHA 126
NG ++ L R N S+YGT YD++KRHA
Sbjct: 4421 NGGKMNSLARSNASIYGTKDDLYDRLKRHA 4450
>UniRef50_Q4Q5G1 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 801
Score = 31.9 bits (69), Expect = 3.0
Identities = 16/64 (25%), Positives = 28/64 (43%)
Frame = +1
Query: 85 GTVQLPYDKIKRHALEQENKTPNALESCVLFYKDSEIRITYNRGDYEIMHLRMSGPLIQP 264
G + YD++K L++ + +ES +L ++ E YNR LR L+
Sbjct: 109 GAIFTLYDELKSEGLKENSSVRPNMESYMLLFRACERSALYNRAFLLYQQLRQQFQLVPE 168
Query: 265 NTIY 276
+Y
Sbjct: 169 TAVY 172
>UniRef50_Q6H0Z5 Cluster: Putative uncharacterized protein; n=1;
Sulfolobus tengchongensis|Rep: Putative uncharacterized
protein - Sulfolobus tengchongensis
Length = 108
Score = 31.5 bits (68), Expect = 4.0
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +1
Query: 139 NKTPNALESCVLFYKDSEIRITYNRGDYEI 228
N P A E C++ +KDSE+ IT+ G+ ++
Sbjct: 61 NVFPYAAEKCLIKFKDSEVEITFKFGEEKL 90
>UniRef50_Q1PV54 Cluster: Strongly similar to 1-deoxy-D-xylulose
5-phosphate synthase; n=1; Candidatus Kuenenia
stuttgartiensis|Rep: Strongly similar to
1-deoxy-D-xylulose 5-phosphate synthase - Candidatus
Kuenenia stuttgartiensis
Length = 644
Score = 31.1 bits (67), Expect = 5.3
Identities = 23/96 (23%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Frame = +1
Query: 28 IKVPNGVRVEKLRPNMSVYGT-VQLPYDKIKRHALEQENKTPNALESCVLFYKDSEIRIT 204
+ + NG+ EKL+P +++Y T +Q YD++ Q+N ++ + D T
Sbjct: 374 VGLANGLSTEKLKPVVAIYSTFLQRAYDQVFHDICLQKNPVVFVMDRSGVVGNDGP---T 430
Query: 205 YNRGDYEIMHLRMSGPLIQPNTIYYS*IRIIIKLFV 312
+N G ++I +LR ++ + S +R ++K+ +
Sbjct: 431 HN-GVFDIAYLRNLPGIVLMSPKDGSELRAMLKIAI 465
>UniRef50_Q2NI66 Cluster: Putative uncharacterized protein; n=1;
Methanosphaera stadtmanae DSM 3091|Rep: Putative
uncharacterized protein - Methanosphaera stadtmanae
(strain DSM 3091)
Length = 439
Score = 31.1 bits (67), Expect = 5.3
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +1
Query: 37 PNGVRVEKLRPNMSVYGTVQLPYDKIKRHALEQ--ENKTPNALESCVL 174
P VE+ +P ++Y T +PY IK ++ E TP+ E V+
Sbjct: 196 PKKANVEQTKPKPNMYSTSDMPYINIKEDIIDNTTEQITPDTSEEIVI 243
>UniRef50_Q5SHY6 Cluster: Serine/threonine protein kinase; n=2;
Thermus thermophilus|Rep: Serine/threonine protein
kinase - Thermus thermophilus (strain HB8 / ATCC 27634 /
DSM 579)
Length = 652
Score = 30.7 bits (66), Expect = 6.9
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -3
Query: 100 AIAQSRKQTCWVAIFQHGRRSAPLCVPTAETLL 2
A+A + WVA+FQHG R P E LL
Sbjct: 416 AVAADPEGGIWVAVFQHGERLVHRLSPQGEVLL 448
>UniRef50_Q05040 Cluster: Factor arrest protein 8; n=2;
Saccharomyces cerevisiae|Rep: Factor arrest protein 8 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 523
Score = 30.7 bits (66), Expect = 6.9
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +1
Query: 97 LPYDKIKRHALEQENKTPNALESCVLFYKDSEIRITYNRGDYEIMHLRMSGPLI 258
L Y K+ + +E TP++ L DS I ++Y+ GD+E +L P I
Sbjct: 423 LVYSFDKKKVVLKEQLTPSSTLPIQLDLNDSIITVSYSNGDFEFRNLENLKPSI 476
>UniRef50_UPI0000DB79E6 Cluster: PREDICTED: similar to CG32708-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to
CG32708-PA - Apis mellifera
Length = 296
Score = 30.3 bits (65), Expect = 9.2
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +1
Query: 34 VPNGVRVEKLRPNMSVYGTVQLPYDKIKRHALEQENKT 147
+P + + K+R ++YG V Y ++ + LEQ++KT
Sbjct: 30 IPKYMNIAKIRELFTIYGEVGRIYFQLAENGLEQDSKT 67
>UniRef50_A6WFU2 Cluster: Integral membrane sensor signal
transduction histidine kinase precursor; n=1;
Kineococcus radiotolerans SRS30216|Rep: Integral
membrane sensor signal transduction histidine kinase
precursor - Kineococcus radiotolerans SRS30216
Length = 382
Score = 30.3 bits (65), Expect = 9.2
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = -1
Query: 108 IVRQLHSPVNRHVGSQFFNTDAVRHLYVSRQPRR 7
I R+LH V+ HV + +A+R L V RQP R
Sbjct: 185 IARELHDVVSHHVTAMVVQAEAMRFL-VERQPER 217
>UniRef50_A6BI77 Cluster: Putative uncharacterized protein; n=1;
Dorea longicatena DSM 13814|Rep: Putative
uncharacterized protein - Dorea longicatena DSM 13814
Length = 815
Score = 30.3 bits (65), Expect = 9.2
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = +1
Query: 130 EQENKTPNALESCVLFYKDSEIRITYNRG--DYEIMHLRMSGPLIQ-PNTIYYS*IRIII 300
EQ+ K+ ALE+ K +++R+TYN G D E L+ L + P TI +S
Sbjct: 601 EQKTKSNIALETYATDLKQTQVRLTYNDGVADKEPKVLKPKQILFERPQTITFSDKDAPE 660
Query: 301 KLFVY 315
K +VY
Sbjct: 661 KYYVY 665
>UniRef50_Q54TM2 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 790
Score = 30.3 bits (65), Expect = 9.2
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = -2
Query: 248 PDILKCIIS*SPLL*VMRISESL*NSTQDSNAFGVLFSCSSACRL 114
P I C+ S S L +RIS Q SN F ++FS + CRL
Sbjct: 453 PMIYMCVCSYSTLF-KLRISNYYRLVPQQSNTFSIMFSANYLCRL 496
>UniRef50_P32053 Cluster: Prophage CP4-57 integrase; n=24;
Gammaproteobacteria|Rep: Prophage CP4-57 integrase -
Escherichia coli (strain K12)
Length = 413
Score = 30.3 bits (65), Expect = 9.2
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 124 ALEQENKTPNALESCVLFYKDSEIRITYNRGDY 222
AL +E P+ +E+ + +E+R YNR DY
Sbjct: 346 ALNEEGFPPDVIEAALAHVDKNEVRRAYNRSDY 378
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 320,538,094
Number of Sequences: 1657284
Number of extensions: 5830262
Number of successful extensions: 13137
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 12925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13132
length of database: 575,637,011
effective HSP length: 89
effective length of database: 428,138,735
effective search space used: 10703468375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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