Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8n16
         (633 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    23   2.1  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   8.6  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   8.6  

>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -2

Query: 143 RTSESDKIDRASREPLDLGESEEKASYVVSYKQKKF 36
           R  E D+I+  SR+P+ +        Y V YK  +F
Sbjct: 300 RFFEIDRINAESRKPIRILFDVSSEIYNVEYKNVEF 335


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/40 (20%), Positives = 23/40 (57%)
 Frame = +2

Query: 386 DLRVNQTPTLAMLHTLFLREHNRIADILSELNPLWSDEKL 505
           ++  N++      HTLF+ +     ++ ++L+P+++  K+
Sbjct: 100 NIATNESADPLAFHTLFISKDAVWRNLRTKLSPVFTSGKM 139


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -2

Query: 632 CCKGSTEICGNIERSSH 582
           C   STE+ GNI R  H
Sbjct: 272 CQNVSTEVIGNILRLMH 288


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,682
Number of Sequences: 336
Number of extensions: 2871
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)