Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8n15
         (681 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            23   6.7  
AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    23   6.7  
AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    23   8.9  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    23   8.9  

>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 9/52 (17%), Positives = 26/52 (50%)
 Frame = +3

Query: 525 NPELSIRIKAEXDKRLLHIIDSGVGMTRADLINNLGTIAKSGTADFLSKMQD 680
           NP++++ I +E   + +   ++    +  ++ NN+G +    +  FL+   +
Sbjct: 326 NPKVTVSIISETQAQQIQSTNAAADFSAGEIENNIGNLQYQLSNKFLANFSN 377


>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 9/18 (50%), Positives = 15/18 (83%)
 Frame = -3

Query: 523 ASSTPRSVSDIRRILSNA 470
           A+STP S  ++RR+L++A
Sbjct: 61  ATSTPVSTGEVRRMLADA 78


>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
           symporter protein.
          Length = 1127

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -3

Query: 517 STPRSVSDIRRILSNASEPFEINSR 443
           S   S SD+ + +S A +P +IN++
Sbjct: 873 SQASSTSDLSKTISVAPDPIDINAK 897


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative
           cell-adhesion protein protein.
          Length = 1881

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 13/40 (32%), Positives = 17/40 (42%)
 Frame = -1

Query: 531 PGSLPARRGPSATSDGSCPTHLNRSRSTRGGRSLYFCRAS 412
           P  LP  R  +   DGS P +    R  +GG   +   AS
Sbjct: 755 PSGLPVLRVTAMDGDGSFPNNHVTYRIQQGGDGRFVIGAS 794


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 521,798
Number of Sequences: 2352
Number of extensions: 8968
Number of successful extensions: 19
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68577420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)