SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8n09
         (673 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    29   0.035
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    29   0.035
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    29   0.035
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    27   0.14 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    26   0.32 
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    24   1.3  
AY052623-1|AAL15471.1|  101|Tribolium castaneum kynurenine 3-mon...    22   4.0  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   5.3  
L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protei...    21   9.2  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   9.2  

>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 29.1 bits (62), Expect = 0.035
 Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
 Frame = -1

Query: 217 PQREPKATPWQALHPYNWSRLKLFLLVLW-ENPSRSMSVFLPLFKFANSMFIVKLATFYF 41
           P+  PK TP    H + W R +  ++ L  ++ S ++++F+P  KF +     +L  FY+
Sbjct: 201 PENGPKMTP---NHLHIWPRGQFMMIALPNKDNSWTVTLFMPFGKFESLRNAAELKDFYY 257

Query: 40  Q 38
           +
Sbjct: 258 K 258


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 29.1 bits (62), Expect = 0.035
 Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
 Frame = -1

Query: 217 PQREPKATPWQALHPYNWSRLKLFLLVLW-ENPSRSMSVFLPLFKFANSMFIVKLATFYF 41
           P+  PK TP    H + W R +  ++ L  ++ S ++++F+P  KF +     +L  FY+
Sbjct: 201 PENGPKMTP---NHLHIWPRGQFMMIALPNKDNSWTVTLFMPFGKFESLRNAAELKDFYY 257

Query: 40  Q 38
           +
Sbjct: 258 K 258


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 29.1 bits (62), Expect = 0.035
 Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
 Frame = -1

Query: 217 PQREPKATPWQALHPYNWSRLKLFLLVLW-ENPSRSMSVFLPLFKFANSMFIVKLATFYF 41
           P+  PK TP    H + W R +  ++ L  ++ S ++++F+P  KF +     +L  FY+
Sbjct: 201 PENGPKMTP---NHLHIWPRGQFMMIALPNKDNSWTVTLFMPFGKFESLRNAAELKDFYY 257

Query: 40  Q 38
           +
Sbjct: 258 K 258


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 27.1 bits (57), Expect = 0.14
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 346 CDECGKLFKNQDEIEYH 396
           CD CGK F+ QD +  H
Sbjct: 110 CDICGKAFRRQDHLRDH 126


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 25.8 bits (54), Expect = 0.32
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 340 LKCDECGKLFKNQDEIEYHAAKTNH 414
           LKC  CG+ F++  E+  H  +T H
Sbjct: 479 LKCMWCGQSFRSLAEMTSHMQQTQH 503


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 6/21 (28%), Positives = 12/21 (57%)
 Frame = +3

Query: 597 QATTSRARDAKNWLNNEGWRK 659
           + +  ++RD  +W  N GW +
Sbjct: 280 ETSWGKSRDESSWFYNSGWER 300


>AY052623-1|AAL15471.1|  101|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 101

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 11/39 (28%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
 Frame = -1

Query: 148 FLLVLWENPSRSMSV--FLPLFKFANSMFIVKLATFYFQ 38
           F+++   N   S +V  F+P  KF +     +L  FY++
Sbjct: 2   FMMIALPNKDNSWTVTLFMPFGKFESLRNAAELKDFYYK 40


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 355 CGKLFKNQDEIEYH 396
           CGK F   DE++ H
Sbjct: 352 CGKRFTRSDELQRH 365


>L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protein
           protein.
          Length = 74

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/21 (33%), Positives = 10/21 (47%)
 Frame = +1

Query: 334 KSLKCDECGKLFKNQDEIEYH 396
           K  +C EC K F     ++ H
Sbjct: 8   KPFECQECHKRFTRDHHLKTH 28


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/21 (33%), Positives = 10/21 (47%)
 Frame = +1

Query: 334 KSLKCDECGKLFKNQDEIEYH 396
           K  +C EC K F     ++ H
Sbjct: 161 KPFECQECHKRFTRDHHLKTH 181


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,226
Number of Sequences: 336
Number of extensions: 2215
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -