Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8m19
         (418 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    23   1.2  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   2.1  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   4.8  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   6.4  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          20   8.4  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    20   8.4  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    20   8.4  

>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 150 SVDGAQQHPLVFXKQNG 100
           +VDG Q+HPL     NG
Sbjct: 146 NVDGCQKHPLCNDDPNG 162


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 22.2 bits (45), Expect = 2.1
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = -2

Query: 129 HPLVFXKQNGFSGNACVISFSDHKL 55
           HP V     G+SG+ C   F+   +
Sbjct: 119 HPQVLLSPGGYSGSLCDQGFAQQPM 143


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 6/19 (31%), Positives = 11/19 (57%)
 Frame = -1

Query: 316 YRNLVVYLTRNHRCASCFC 260
           YR    + + ++ C +CFC
Sbjct: 680 YRQEAQWTSSDNPCTTCFC 698


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -3

Query: 386 STISNRVRY*VASTSVMLKSLKSI 315
           S ISNR+R+ +A+    + S  S+
Sbjct: 81  SPISNRIRHEMATPMATMNSYGSV 104


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -1

Query: 211 FQSLLKPRCQTRGLAF 164
           ++ L+  RC+ RG+ F
Sbjct: 756 YKDLVAKRCEERGILF 771


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 52  MEFVVAETNDTSIPG 96
           +E +V ETN TS+ G
Sbjct: 216 LETLVQETNRTSVEG 230


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 52  MEFVVAETNDTSIPG 96
           +E +V ETN TS+ G
Sbjct: 216 LETLVQETNRTSVEG 230


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,399
Number of Sequences: 336
Number of extensions: 1476
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9174063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)