Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8m19
(418 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 26 0.20
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 24 0.60
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 21 4.2
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 21 5.6
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 21 7.4
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 20 9.7
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 20 9.7
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 20 9.7
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 20 9.7
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 20 9.7
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 20 9.7
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 20 9.7
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 20 9.7
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 20 9.7
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 20 9.7
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 20 9.7
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 20 9.7
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 20 9.7
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 20 9.7
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 20 9.7
>AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase
protein.
Length = 693
Score = 25.8 bits (54), Expect = 0.20
Identities = 11/35 (31%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -3
Query: 158 IDGRSTEHNST-PSFSVNKMGSPGMLVSLVSATTN 57
+D EH +T P ++V ++ PG+ ++ + TTN
Sbjct: 408 VDDVFQEHKNTLPQYTVQQLDFPGIEIADIKLTTN 442
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 24.2 bits (50), Expect = 0.60
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +1
Query: 301 QPDYDMDLSDFSITEVEATQYLTLLLIVE 387
QP D+SD+ + LT+ LIVE
Sbjct: 363 QPSEGEDISDYKFRHITEITILTVQLIVE 391
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.4 bits (43), Expect = 4.2
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -3
Query: 152 GRSTEHNSTPSFSVNKMGSP 93
GRS EH PS + ++ +P
Sbjct: 322 GRSREHRIIPSHYIEQIPAP 341
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 21.0 bits (42), Expect = 5.6
Identities = 6/16 (37%), Positives = 12/16 (75%)
Frame = -1
Query: 211 FQSLLKPRCQTRGLAF 164
F+ L++ +C+ RG+ F
Sbjct: 762 FKDLVQKKCEERGILF 777
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 20.6 bits (41), Expect = 7.4
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = -3
Query: 215 SFSKFTKASVSNSRLSILTIDGRSTEHNSTPSFSVNKMGSP 93
S+ K+ + S SR GRS EH PS + ++ P
Sbjct: 288 SYRKYRETSKERSRDR--RERGRSREHRIIPSHYIEQIPVP 326
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 20.2 bits (40), Expect = 9.7
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -3
Query: 152 GRSTEHNSTPSFSVNKMGSP 93
GRS EH PS + ++ P
Sbjct: 74 GRSREHRIIPSHYIEQIPVP 93
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 20.2 bits (40), Expect = 9.7
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -3
Query: 152 GRSTEHNSTPSFSVNKMGSP 93
GRS EH PS + ++ P
Sbjct: 74 GRSREHRIIPSHYIEQIPVP 93
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 20.2 bits (40), Expect = 9.7
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -3
Query: 152 GRSTEHNSTPSFSVNKMGSP 93
GRS EH PS + ++ P
Sbjct: 74 GRSREHRIIPSHYIEQIPVP 93
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 20.2 bits (40), Expect = 9.7
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -3
Query: 152 GRSTEHNSTPSFSVNKMGSP 93
GRS EH PS + ++ P
Sbjct: 74 GRSREHRIIPSHYIEQIPVP 93
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 20.2 bits (40), Expect = 9.7
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -3
Query: 152 GRSTEHNSTPSFSVNKMGSP 93
GRS EH PS + ++ P
Sbjct: 74 GRSREHRIIPSHYIEQIPVP 93
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 20.2 bits (40), Expect = 9.7
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -3
Query: 152 GRSTEHNSTPSFSVNKMGSP 93
GRS EH PS + ++ P
Sbjct: 74 GRSREHRIIPSHYIEQIPVP 93
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 20.2 bits (40), Expect = 9.7
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -3
Query: 152 GRSTEHNSTPSFSVNKMGSP 93
GRS EH PS + ++ P
Sbjct: 74 GRSREHRIIPSHYIEQIPVP 93
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.2 bits (40), Expect = 9.7
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -3
Query: 152 GRSTEHNSTPSFSVNKMGSP 93
GRS EH PS + ++ P
Sbjct: 323 GRSREHRIIPSHYIEQIPVP 342
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.2 bits (40), Expect = 9.7
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -3
Query: 152 GRSTEHNSTPSFSVNKMGSP 93
GRS EH PS + ++ P
Sbjct: 323 GRSREHRIIPSHYIEQIPVP 342
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.2 bits (40), Expect = 9.7
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -3
Query: 152 GRSTEHNSTPSFSVNKMGSP 93
GRS EH PS + ++ P
Sbjct: 323 GRSREHRIIPSHYIEQIPVP 342
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.2 bits (40), Expect = 9.7
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -3
Query: 152 GRSTEHNSTPSFSVNKMGSP 93
GRS EH PS + ++ P
Sbjct: 323 GRSREHRIIPSHYIEQIPVP 342
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.2 bits (40), Expect = 9.7
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -3
Query: 152 GRSTEHNSTPSFSVNKMGSP 93
GRS EH PS + ++ P
Sbjct: 323 GRSREHRIIPSHYIEQIPVP 342
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.2 bits (40), Expect = 9.7
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -3
Query: 152 GRSTEHNSTPSFSVNKMGSP 93
GRS EH PS + ++ P
Sbjct: 323 GRSREHRIIPSHYIEQIPVP 342
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 20.2 bits (40), Expect = 9.7
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -3
Query: 152 GRSTEHNSTPSFSVNKMGSP 93
GRS EH PS + ++ P
Sbjct: 323 GRSREHRIIPSHYIEQIPVP 342
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 20.2 bits (40), Expect = 9.7
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +2
Query: 140 PSTDRLSLKC*AASLTP 190
PST+ L+ KC TP
Sbjct: 346 PSTETLNTKCNTLERTP 362
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,728
Number of Sequences: 438
Number of extensions: 1795
Number of successful extensions: 20
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10626762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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