Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8m17
         (194 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    20   2.0  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    20   2.0  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    20   2.0  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    20   2.0  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    20   2.0  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    20   2.6  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    20   2.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    20   2.6  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    20   2.6  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    19   3.5  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        19   3.5  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    19   4.6  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     19   6.0  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    19   6.0  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    18   8.0  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    18   8.0  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    18   8.0  

>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 20.2 bits (40), Expect = 2.0
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -2

Query: 34  IQQLHNHGHQI 2
           +Q LH  GH+I
Sbjct: 235 VQDLHRRGHEI 245


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 20.2 bits (40), Expect = 2.0
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -2

Query: 34  IQQLHNHGHQI 2
           +Q LH  GH+I
Sbjct: 242 VQDLHRRGHEI 252


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 20.2 bits (40), Expect = 2.0
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = -2

Query: 103 LQSGS*VHLQTSLIWHVDHAACQIQQLHN 17
           L+ G  + + T   W++DH      + HN
Sbjct: 473 LELGYRIIVSTKDAWYLDHGFWGTTEYHN 501


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 20.2 bits (40), Expect = 2.0
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +2

Query: 2   NLVPVVVKLLYLASC 46
           NL+P+ V +L  A+C
Sbjct: 923 NLLPIAVFILVCATC 937


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 20.2 bits (40), Expect = 2.0
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +2

Query: 2   NLVPVVVKLLYLASC 46
           NL+P+ V +L  A+C
Sbjct: 923 NLLPIAVFILVCATC 937


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 19.8 bits (39), Expect = 2.6
 Identities = 5/11 (45%), Positives = 9/11 (81%)
 Frame = -2

Query: 34  IQQLHNHGHQI 2
           +Q++H  GH+I
Sbjct: 243 VQEMHRKGHEI 253


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 19.8 bits (39), Expect = 2.6
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +3

Query: 63  INEVCRWTHDPLWRPLQ 113
           +N +C+ TH  L++ +Q
Sbjct: 211 VNNICQATHKQLFQLVQ 227


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 19.8 bits (39), Expect = 2.6
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +1

Query: 55   RAKSMKFVDGLM 90
            R K +KF+DG+M
Sbjct: 1180 RKKIVKFLDGIM 1191


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 19.8 bits (39), Expect = 2.6
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -3

Query: 93  DHESIYKLH 67
           DH S+Y LH
Sbjct: 246 DHNSLYSLH 254


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 19.4 bits (38), Expect = 3.5
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -1

Query: 101 PEWIMSPSTNFIDLAR*PRSLP 36
           PEW   PST   D ++  ++ P
Sbjct: 410 PEWARPPSTPSADGSKPVQTTP 431


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 19.4 bits (38), Expect = 3.5
 Identities = 9/27 (33%), Positives = 12/27 (44%)
 Frame = +1

Query: 70  KFVDGLMIHSGDPCNDYVXTATRHVLL 150
           K +  LMI     CN YV      ++L
Sbjct: 236 KAMSDLMIVKLSHCNSYVDGGRNEIIL 262


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 19.0 bits (37), Expect = 4.6
 Identities = 4/15 (26%), Positives = 11/15 (73%)
 Frame = -2

Query: 76  QTSLIWHVDHAACQI 32
           +T++ W+  + AC++
Sbjct: 85  KTTVAWYAGNVACKV 99


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 18.6 bits (36), Expect = 6.0
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = -2

Query: 55  VDHAACQIQQLHNHGH 8
           V+H +     +H HGH
Sbjct: 123 VNHLSSDSTTIHWHGH 138


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 18.6 bits (36), Expect = 6.0
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -1

Query: 110 QGSPEWIMSPSTN 72
           Q + +W+ SPS N
Sbjct: 101 QRTDDWLSSPSGN 113


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 18.2 bits (35), Expect = 8.0
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +1

Query: 1   ESGARGCEVVVSGKLRG 51
           E G+RG     S  LRG
Sbjct: 621 EDGSRGVIAFASRSLRG 637


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 18.2 bits (35), Expect = 8.0
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +1

Query: 67  MKFVDGLMIHSGDP 108
           M+ V+G M+H  +P
Sbjct: 4   MQSVEGAMVHHLEP 17


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 18.2 bits (35), Expect = 8.0
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +1

Query: 67  MKFVDGLMIHSGDP 108
           M+ V+G M+H  +P
Sbjct: 4   MQSVEGAMVHHLEP 17


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,190
Number of Sequences: 336
Number of extensions: 786
Number of successful extensions: 18
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 44
effective length of database: 107,801
effective search space used:  2156020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)