BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8m17
(194 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY745205-1|AAU93472.1| 91|Anopheles gambiae cytochrome P450 pr... 24 0.76
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal... 22 3.1
AY070257-1|AAL59656.1| 217|Anopheles gambiae glutathione S-tran... 21 5.4
AY578808-1|AAT07313.1| 458|Anopheles gambiae saxophone protein. 20 9.4
AY081778-1|AAL91655.1| 507|Anopheles gambiae cytochrome P450 pr... 20 9.4
AJ276486-1|CAB90818.1| 364|Anopheles gambiae serine protease pr... 20 9.4
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 20 9.4
>AY745205-1|AAU93472.1| 91|Anopheles gambiae cytochrome P450
protein.
Length = 91
Score = 23.8 bits (49), Expect = 0.76
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +1
Query: 106 PCNDYVXTATRHVLLRXGVLGIKV 177
P +DYV TRH++ + V+ I +
Sbjct: 10 PSSDYVIPGTRHIVPKDTVVQIPI 33
>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
growth factor receptorprotein.
Length = 1433
Score = 21.8 bits (44), Expect = 3.1
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +3
Query: 93 PLWRPLQ*LRXHCYQTCASQARSTRNQGQNH 185
P+ +PLQ L+ Q Q + + Q Q H
Sbjct: 1292 PIQQPLQTLQHQYQQQLQQQQQQQQQQQQQH 1322
>AY070257-1|AAL59656.1| 217|Anopheles gambiae glutathione
S-transferase e8 protein.
Length = 217
Score = 21.0 bits (42), Expect = 5.4
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +1
Query: 115 DYVXTATRHVLLRXGVLGIKVKIML 189
D V R VLL LG+K +I L
Sbjct: 6 DEVSPPVRGVLLAIAALGVKDRIKL 30
>AY578808-1|AAT07313.1| 458|Anopheles gambiae saxophone protein.
Length = 458
Score = 20.2 bits (40), Expect = 9.4
Identities = 7/19 (36%), Positives = 9/19 (47%)
Frame = +3
Query: 78 RWTHDPLWRPLQ*LRXHCY 134
RWT DP + L C+
Sbjct: 403 RWTSDPFLASMSKLMRECW 421
>AY081778-1|AAL91655.1| 507|Anopheles gambiae cytochrome P450
protein.
Length = 507
Score = 20.2 bits (40), Expect = 9.4
Identities = 8/24 (33%), Positives = 12/24 (50%)
Frame = +1
Query: 106 PCNDYVXTATRHVLLRXGVLGIKV 177
P DY T+HV+ + + I V
Sbjct: 384 PMRDYTVPGTKHVIPKDTFIQIPV 407
>AJ276486-1|CAB90818.1| 364|Anopheles gambiae serine protease
protein.
Length = 364
Score = 20.2 bits (40), Expect = 9.4
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +1
Query: 82 GLMIHSGDPCNDYVXTA 132
G ++SGDPC TA
Sbjct: 22 GQSLNSGDPCQTPSGTA 38
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 20.2 bits (40), Expect = 9.4
Identities = 7/18 (38%), Positives = 8/18 (44%)
Frame = +3
Query: 36 WQAAWSTCQINEVCRWTH 89
W A S + RWTH
Sbjct: 902 WDADASQADASRFVRWTH 919
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,947
Number of Sequences: 2352
Number of extensions: 3108
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 42
effective length of database: 465,195
effective search space used: 10234290
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
- SilkBase 1999-2023 -