Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8m17
(194 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X72921-1|CAA51425.1| 246|Drosophila melanogaster ribosomal prot... 130 3e-31
L13690-1|AAA28875.1| 246|Drosophila melanogaster ribosomal prot... 130 3e-31
BT024258-1|ABC86320.1| 253|Drosophila melanogaster IP15838p pro... 130 3e-31
AY118971-1|AAM50831.1| 246|Drosophila melanogaster LD47488p pro... 130 3e-31
AE014297-3319|AAF56129.1| 246|Drosophila melanogaster CG6779-PA... 130 3e-31
AE014296-791|AAF47860.1| 180|Drosophila melanogaster CG1295-PA ... 27 3.6
BT001487-1|AAN71242.1| 444|Drosophila melanogaster LD23846p pro... 27 4.8
AE014297-3180|AAF56017.3| 362|Drosophila melanogaster CG5315-PB... 27 4.8
AE014297-3179|AAN13909.1| 444|Drosophila melanogaster CG5315-PC... 27 4.8
AE014297-3178|AAF56016.2| 444|Drosophila melanogaster CG5315-PA... 27 4.8
AY058244-1|AAL13473.1| 796|Drosophila melanogaster GH01087p pro... 26 8.4
AE014297-1919|AAF55113.1| 796|Drosophila melanogaster CG7262-PA... 26 8.4
>X72921-1|CAA51425.1| 246|Drosophila melanogaster ribosomal protein
S3 protein.
Length = 246
Score = 130 bits (313), Expect = 3e-31
Identities = 60/64 (93%), Positives = 62/64 (96%)
Frame = +1
Query: 1 ESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVXTATRHVLLRXGVLGIKVK 180
ESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYV TATRHVLLR GVLGIKVK
Sbjct: 130 ESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGIKVK 189
Query: 181 IMLP 192
+MLP
Sbjct: 190 VMLP 193
>L13690-1|AAA28875.1| 246|Drosophila melanogaster ribosomal protein
S3/AP endonucleaseDNA repair protein protein.
Length = 246
Score = 130 bits (313), Expect = 3e-31
Identities = 60/64 (93%), Positives = 62/64 (96%)
Frame = +1
Query: 1 ESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVXTATRHVLLRXGVLGIKVK 180
ESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYV TATRHVLLR GVLGIKVK
Sbjct: 130 ESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGIKVK 189
Query: 181 IMLP 192
+MLP
Sbjct: 190 VMLP 193
>BT024258-1|ABC86320.1| 253|Drosophila melanogaster IP15838p
protein.
Length = 253
Score = 130 bits (313), Expect = 3e-31
Identities = 60/64 (93%), Positives = 62/64 (96%)
Frame = +1
Query: 1 ESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVXTATRHVLLRXGVLGIKVK 180
ESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYV TATRHVLLR GVLGIKVK
Sbjct: 137 ESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGIKVK 196
Query: 181 IMLP 192
+MLP
Sbjct: 197 VMLP 200
>AY118971-1|AAM50831.1| 246|Drosophila melanogaster LD47488p
protein.
Length = 246
Score = 130 bits (313), Expect = 3e-31
Identities = 60/64 (93%), Positives = 62/64 (96%)
Frame = +1
Query: 1 ESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVXTATRHVLLRXGVLGIKVK 180
ESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYV TATRHVLLR GVLGIKVK
Sbjct: 130 ESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGIKVK 189
Query: 181 IMLP 192
+MLP
Sbjct: 190 VMLP 193
>AE014297-3319|AAF56129.1| 246|Drosophila melanogaster CG6779-PA
protein.
Length = 246
Score = 130 bits (313), Expect = 3e-31
Identities = 60/64 (93%), Positives = 62/64 (96%)
Frame = +1
Query: 1 ESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVXTATRHVLLRXGVLGIKVK 180
ESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYV TATRHVLLR GVLGIKVK
Sbjct: 130 ESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGIKVK 189
Query: 181 IMLP 192
+MLP
Sbjct: 190 VMLP 193
>AE014296-791|AAF47860.1| 180|Drosophila melanogaster CG1295-PA
protein.
Length = 180
Score = 27.1 bits (57), Expect = 3.6
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +3
Query: 96 LWRPLQ*LRXHCYQTC--ASQARSTRNQGQN 182
LW P+ CY+ C AS+ R+T NQ +N
Sbjct: 93 LWEPINRFWAECYEACKAASKQRAT-NQAEN 122
>BT001487-1|AAN71242.1| 444|Drosophila melanogaster LD23846p
protein.
Length = 444
Score = 26.6 bits (56), Expect = 4.8
Identities = 6/20 (30%), Positives = 11/20 (55%)
Frame = +3
Query: 33 IWQAAWSTCQINEVCRWTHD 92
+W+A+W C + +W D
Sbjct: 156 VWEASWKVCHYKNLPKWLQD 175
>AE014297-3180|AAF56017.3| 362|Drosophila melanogaster CG5315-PB,
isoform B protein.
Length = 362
Score = 26.6 bits (56), Expect = 4.8
Identities = 6/20 (30%), Positives = 11/20 (55%)
Frame = +3
Query: 33 IWQAAWSTCQINEVCRWTHD 92
+W+A+W C + +W D
Sbjct: 74 VWEASWKVCHYKNLPKWLQD 93
>AE014297-3179|AAN13909.1| 444|Drosophila melanogaster CG5315-PC,
isoform C protein.
Length = 444
Score = 26.6 bits (56), Expect = 4.8
Identities = 6/20 (30%), Positives = 11/20 (55%)
Frame = +3
Query: 33 IWQAAWSTCQINEVCRWTHD 92
+W+A+W C + +W D
Sbjct: 156 VWEASWKVCHYKNLPKWLQD 175
>AE014297-3178|AAF56016.2| 444|Drosophila melanogaster CG5315-PA,
isoform A protein.
Length = 444
Score = 26.6 bits (56), Expect = 4.8
Identities = 6/20 (30%), Positives = 11/20 (55%)
Frame = +3
Query: 33 IWQAAWSTCQINEVCRWTHD 92
+W+A+W C + +W D
Sbjct: 156 VWEASWKVCHYKNLPKWLQD 175
>AY058244-1|AAL13473.1| 796|Drosophila melanogaster GH01087p
protein.
Length = 796
Score = 25.8 bits (54), Expect = 8.4
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -1
Query: 92 IMSPSTNFIDLAR*PRSLPDTTTSQPRA 9
+++PS NFIDL R P QPR+
Sbjct: 142 LIAPSQNFIDLQRLPEPTIVNPLCQPRS 169
>AE014297-1919|AAF55113.1| 796|Drosophila melanogaster CG7262-PA
protein.
Length = 796
Score = 25.8 bits (54), Expect = 8.4
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -1
Query: 92 IMSPSTNFIDLAR*PRSLPDTTTSQPRA 9
+++PS NFIDL R P QPR+
Sbjct: 142 LIAPSQNFIDLQRLPEPTIVNPLCQPRS 169
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,050,389
Number of Sequences: 53049
Number of extensions: 151305
Number of successful extensions: 369
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 369
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 369
length of database: 24,988,368
effective HSP length: 44
effective length of database: 22,654,212
effective search space used: 453084240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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