Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8m13
(709 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock prote... 29 0.028
EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetyla... 24 1.1
EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetyla... 24 1.1
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 24 1.1
AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 24 1.1
AY008296-1|AAG22858.1| 556|Tribolium castaneum Dorsal protein. 22 5.6
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 7.4
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 7.4
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 7.4
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 7.4
AM295016-1|CAL25731.1| 96|Tribolium castaneum ecdysone recepto... 21 7.4
AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory recept... 21 7.4
AY052394-1|AAL15468.1| 228|Tribolium castaneum tryptophan oxyge... 21 9.8
AY052392-1|AAL15466.1| 388|Tribolium castaneum tryptophan oxyge... 21 9.8
AY052390-1|AAL15464.1| 388|Tribolium castaneum tryptophan oxyge... 21 9.8
AM292368-1|CAL23180.2| 387|Tribolium castaneum gustatory recept... 21 9.8
AM292347-1|CAL23159.2| 387|Tribolium castaneum gustatory recept... 21 9.8
AM292327-1|CAL23139.2| 387|Tribolium castaneum gustatory recept... 21 9.8
>EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock protein
90 protein.
Length = 721
Score = 29.5 bits (63), Expect = 0.028
Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 6/85 (7%)
Frame = +1
Query: 133 DKKEVAPE-EVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESN- 306
D+ E E ++ K S P K V E KE DEA E+ E G+ ++ +
Sbjct: 186 DQTEFLEEHKIKEIVKKHSQFIGYPIKLVVEKERE-KELSDDEAEEEKKEEEGEDKDKDK 244
Query: 307 ----DASENGDATEKKETGVKRKSV 369
D E+ D KKE K+K++
Sbjct: 245 PKIEDVGEDEDEDTKKEDKKKKKTI 269
>EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetylase
2B protein.
Length = 528
Score = 24.2 bits (50), Expect = 1.1
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +1
Query: 238 KENGTDEAPEDSPAENGDAEESNDASENGDATE 336
+E G DEA D EN A+E + GD +
Sbjct: 21 EEEGGDEATADELCENRPADEYFRLTTEGDCRD 53
>EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetylase
2A protein.
Length = 535
Score = 24.2 bits (50), Expect = 1.1
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +1
Query: 238 KENGTDEAPEDSPAENGDAEESNDASENGDATE 336
+E G DEA D EN A+E + GD +
Sbjct: 21 EEEGGDEATADELCENRPADEYFRLTTEGDCRD 53
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 24.2 bits (50), Expect = 1.1
Identities = 10/37 (27%), Positives = 17/37 (45%)
Frame = -1
Query: 370 PQISSSHQSLSFLWHHRSQMHRCFLQHHHFQQANLLG 260
P +++ + + HH + H Q HH QQ + G
Sbjct: 155 PPLTTQSMNNHHMGHHMQEQHPQHHQPHHQQQHMMYG 191
>AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless
protein.
Length = 325
Score = 24.2 bits (50), Expect = 1.1
Identities = 10/37 (27%), Positives = 17/37 (45%)
Frame = -1
Query: 370 PQISSSHQSLSFLWHHRSQMHRCFLQHHHFQQANLLG 260
P +++ + + HH + H Q HH QQ + G
Sbjct: 157 PPLTTQSMNNHHMGHHMQEQHPQHHQPHHQQQHMMYG 193
>AY008296-1|AAG22858.1| 556|Tribolium castaneum Dorsal protein.
Length = 556
Score = 21.8 bits (44), Expect = 5.6
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = -2
Query: 552 CRSGICGCELNSN 514
C+ G+C E+NS+
Sbjct: 140 CKKGVCTMEINSD 152
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 7.4
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2
Query: 57 HVLRTTENNAHCTK 16
H+L +TE N CTK
Sbjct: 1355 HILASTELNLCCTK 1368
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 7.4
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2
Query: 57 HVLRTTENNAHCTK 16
H+L +TE N CTK
Sbjct: 1355 HILASTELNLCCTK 1368
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 21.4 bits (43), Expect = 7.4
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2
Query: 57 HVLRTTENNAHCTK 16
H+L +TE N CTK
Sbjct: 1355 HILASTELNLCCTK 1368
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 21.4 bits (43), Expect = 7.4
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2
Query: 57 HVLRTTENNAHCTK 16
H+L +TE N CTK
Sbjct: 1355 HILASTELNLCCTK 1368
>AM295016-1|CAL25731.1| 96|Tribolium castaneum ecdysone receptor
(isoform B) protein.
Length = 96
Score = 21.4 bits (43), Expect = 7.4
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +1
Query: 145 VAPEEVTSTEPKESPVKKSPAKKVEAAE 228
VAPEE +S S + SPA + + +
Sbjct: 9 VAPEESSSEVTSSSALVMSPANSLASTD 36
>AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory receptor
candidate 51 protein.
Length = 771
Score = 21.4 bits (43), Expect = 7.4
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +2
Query: 5 WTSALVQ*ALFSVVRNTCFEFLFTFQVISFF*STLQ 112
W+S L L S+ + + ++ FQ+ +F S LQ
Sbjct: 551 WSSFLKISVLQSLWASPTCDLMYEFQIFTFLMSLLQ 586
>AY052394-1|AAL15468.1| 228|Tribolium castaneum tryptophan
oxygenase protein.
Length = 228
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -1
Query: 391 LLFLHQEPQISSSHQSLSFL 332
+ F EP+ S HQ L+ L
Sbjct: 116 ITFYRDEPRFSQPHQILTLL 135
>AY052392-1|AAL15466.1| 388|Tribolium castaneum tryptophan
oxygenase protein.
Length = 388
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -1
Query: 391 LLFLHQEPQISSSHQSLSFL 332
+ F EP+ S HQ L+ L
Sbjct: 276 ITFYRDEPRFSQPHQILTLL 295
>AY052390-1|AAL15464.1| 388|Tribolium castaneum tryptophan
oxygenase protein.
Length = 388
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -1
Query: 391 LLFLHQEPQISSSHQSLSFL 332
+ F EP+ S HQ L+ L
Sbjct: 276 ITFYRDEPRFSQPHQILTLL 295
>AM292368-1|CAL23180.2| 387|Tribolium castaneum gustatory receptor
candidate 47 protein.
Length = 387
Score = 21.0 bits (42), Expect = 9.8
Identities = 9/45 (20%), Positives = 19/45 (42%)
Frame = +2
Query: 476 IIYAWFTAMHQCPLEFNSHPHIPLLQMYYTHTDSLIL*RVELFCV 610
+++ + HQ L + LLQ+ + D +++F V
Sbjct: 295 LLFVFCDCSHQASLNIARRVQVTLLQVNLSQVDPATRKEIDIFLV 339
>AM292347-1|CAL23159.2| 387|Tribolium castaneum gustatory receptor
candidate 26 protein.
Length = 387
Score = 21.0 bits (42), Expect = 9.8
Identities = 9/45 (20%), Positives = 19/45 (42%)
Frame = +2
Query: 476 IIYAWFTAMHQCPLEFNSHPHIPLLQMYYTHTDSLIL*RVELFCV 610
+++ + HQ L + LLQ+ + D +++F V
Sbjct: 295 LLFVFCDCSHQASLNIARRVQVTLLQVNLSQVDPATRKEIDIFLV 339
>AM292327-1|CAL23139.2| 387|Tribolium castaneum gustatory receptor
candidate 6 protein.
Length = 387
Score = 21.0 bits (42), Expect = 9.8
Identities = 9/45 (20%), Positives = 19/45 (42%)
Frame = +2
Query: 476 IIYAWFTAMHQCPLEFNSHPHIPLLQMYYTHTDSLIL*RVELFCV 610
+++ + HQ L + LLQ+ + D +++F V
Sbjct: 295 LLFVFCDCSHQASLNIARRVQVTLLQVNLSQVDPATRKEIDIFLV 339
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,559
Number of Sequences: 336
Number of extensions: 2832
Number of successful extensions: 18
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -