Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8m09
         (871 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P41709 Cluster: Uncharacterized 9.4 kDa protein in PE38...   130   4e-29
UniRef50_A6M2H9 Cluster: Diguanylate cyclase; n=2; Clostridium|R...    34   4.1  
UniRef50_Q64WD5 Cluster: Putative capsular polysaccharide polyme...    34   5.4  
UniRef50_Q237T3 Cluster: ABC transporter family protein; n=1; Te...    33   9.4  
UniRef50_Q59KG1 Cluster: Potential M1 family aminopeptidase; n=2...    33   9.4  
UniRef50_Q09103 Cluster: Eye-specific diacylglycerol kinase; n=7...    33   9.4  

>UniRef50_P41709 Cluster: Uncharacterized 9.4 kDa protein in PE38
           3'region; n=5; Nucleopolyhedrovirus|Rep: Uncharacterized
           9.4 kDa protein in PE38 3'region - Autographa
           californica nuclear polyhedrosis virus (AcMNPV)
          Length = 81

 Score =  130 bits (314), Expect = 4e-29
 Identities = 64/78 (82%), Positives = 67/78 (85%), Gaps = 5/78 (6%)
 Frame = +1

Query: 16  MDSSNCIKIDVKYHMPLHYQCDINADKNVVNAYDAIDVDPNKKFIINHNHE--QVDETNK 189
           MDSSNCIKIDVKY MPLHYQCD NADK+VVNAYD IDVDPNK+FIINHNHE  QV+ETNK
Sbjct: 1   MDSSNCIKIDVKYDMPLHYQCDNNADKDVVNAYDTIDVDPNKRFIINHNHEQQQVNETNK 60

Query: 190 QEVVDKT---DATTYNSC 234
           Q VVDKT   D  TYNSC
Sbjct: 61  Q-VVDKTFINDTATYNSC 77


>UniRef50_A6M2H9 Cluster: Diguanylate cyclase; n=2; Clostridium|Rep:
           Diguanylate cyclase - Clostridium beijerinckii NCIMB
           8052
          Length = 356

 Score = 34.3 bits (75), Expect = 4.1
 Identities = 19/67 (28%), Positives = 34/67 (50%)
 Frame = -2

Query: 252 HLNFYDARIVCCCVSFIDDFLFVCFIDLFVIMINYKFFVGVNIDSVIRIYNVFICVNVTL 73
           H    D RI+   ++ I       FI +F+I++    F G+N  S+I   N+FI + +  
Sbjct: 60  HNTIIDFRIIPVIITSIYGGFISTFISVFIIILFRLTFFGINYSSLITSGNLFILLIIFT 119

Query: 72  IM*RHMV 52
           I+ R+ +
Sbjct: 120 IISRYKI 126


>UniRef50_Q64WD5 Cluster: Putative capsular polysaccharide
           polymerase; n=1; Bacteroides fragilis|Rep: Putative
           capsular polysaccharide polymerase - Bacteroides
           fragilis
          Length = 345

 Score = 33.9 bits (74), Expect = 5.4
 Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
 Frame = -2

Query: 255 YHLNFYDARIVCCCVSFIDD-FLFVCFIDLFVIMINYKFFVGVNIDSVIRIYNV 97
           Y L ++   I C   S   + F  +C   LF I   ++++VGV+  + ++IYN+
Sbjct: 4   YFLIYFFLLIFCSLGSVTKNRFFLICVFILFSIFSGFRYYVGVDYVNYVKIYNL 57


>UniRef50_Q237T3 Cluster: ABC transporter family protein; n=1;
            Tetrahymena thermophila SB210|Rep: ABC transporter family
            protein - Tetrahymena thermophila SB210
          Length = 1428

 Score = 33.1 bits (72), Expect = 9.4
 Identities = 14/37 (37%), Positives = 26/37 (70%)
 Frame = -2

Query: 210  SFIDDFLFVCFIDLFVIMINYKFFVGVNIDSVIRIYN 100
            SF D FLF+  + LF+++++  F+V V++ S  R++N
Sbjct: 891  SFKDTFLFLTMLQLFLMILSSVFYVLVSLLSCYRLFN 927


>UniRef50_Q59KG1 Cluster: Potential M1 family aminopeptidase; n=2;
           Candida albicans|Rep: Potential M1 family aminopeptidase
           - Candida albicans (Yeast)
          Length = 459

 Score = 33.1 bits (72), Expect = 9.4
 Identities = 18/49 (36%), Positives = 25/49 (51%)
 Frame = +1

Query: 67  HYQCDINADKNVVNAYDAIDVDPNKKFIINHNHEQVDETNKQEVVDKTD 213
           HY+ DIN  K   N    I +D N    I+H ++Q  E  KQE  +K +
Sbjct: 20  HYKLDINHQKPNFNGVAIITIDKNHHQQISHKYKQ-SEKEKQEKEEKEE 67


>UniRef50_Q09103 Cluster: Eye-specific diacylglycerol kinase; n=7;
           Eumetazoa|Rep: Eye-specific diacylglycerol kinase -
           Drosophila melanogaster (Fruit fly)
          Length = 1457

 Score = 33.1 bits (72), Expect = 9.4
 Identities = 14/45 (31%), Positives = 26/45 (57%)
 Frame = +1

Query: 82  INADKNVVNAYDAIDVDPNKKFIINHNHEQVDETNKQEVVDKTDA 216
           + A +  ++  +AI V+P    + N +HE+VD +N +  VD  D+
Sbjct: 406 VRARRRSISRQEAIFVEPTGNSLENVSHEEVDNSNTKSSVDTADS 450


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 640,047,241
Number of Sequences: 1657284
Number of extensions: 10957018
Number of successful extensions: 20552
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 18687
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20517
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 77472727479
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)