Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8m09
         (871 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   5.5  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   7.2  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   9.5  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -3

Query: 758 NHDQEMTSFVFQNLI*EMMSLVFKT 684
           N + ++ +F FQ  I ++MSL+  T
Sbjct: 5   NQNGDVETFAFQAEIAQLMSLIINT 29


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +1

Query: 79  DINADKNVVNAYDAID 126
           DIN  K +V ++DAID
Sbjct: 497 DINTWKMLVKSFDAID 512


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 12/40 (30%), Positives = 17/40 (42%)
 Frame = +1

Query: 37  KIDVKYHMPLHYQCDINADKNVVNAYDAIDVDPNKKFIIN 156
           K DVK  +P  +      D    N Y+   V PN   +I+
Sbjct: 487 KPDVKIFLPFRFHIYTPEDLFAPNTYNRHLVAPNGDHVIS 526


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,271
Number of Sequences: 336
Number of extensions: 3339
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23996456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)