Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8m05
(704 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z29443-8|CAE45742.1| 455|Caenorhabditis elegans Hypothetical pr... 169 2e-42
Z29443-7|CAA82571.2| 497|Caenorhabditis elegans Hypothetical pr... 169 2e-42
U40483-1|AAA99775.1| 322|Caenorhabditis elegans NEX1 annexin pr... 109 1e-24
U00064-7|AAB52702.1| 322|Caenorhabditis elegans Annexin family ... 109 1e-24
Z32680-3|CAA83598.1| 317|Caenorhabditis elegans Hypothetical pr... 95 4e-20
U88315-15|AAB42365.1| 351|Caenorhabditis elegans Annexin family... 71 1e-12
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 29 3.2
Z82268-4|CAB05199.1| 741|Caenorhabditis elegans Hypothetical pr... 29 3.2
U40799-3|AAA81481.1| 323|Caenorhabditis elegans Hypothetical pr... 28 7.5
AY255668-1|AAQ96605.1| 167|Caenorhabditis elegans MiRP5 protein. 28 7.5
AF098994-1|AAC67472.2| 167|Caenorhabditis elegans Hypothetical ... 28 7.5
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 27 9.9
U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog (hedg... 27 9.9
U21321-3|AAG00052.2| 655|Caenorhabditis elegans Hypothetical pr... 27 9.9
>Z29443-8|CAE45742.1| 455|Caenorhabditis elegans Hypothetical
protein T07C4.9b protein.
Length = 455
Score = 169 bits (411), Expect = 2e-42
Identities = 88/202 (43%), Positives = 120/202 (59%)
Frame = +3
Query: 99 TPTVYXXXXXXXXXXXXTLRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDL 278
TP+V+ LRKAMKG G + +I +LC+R QR EI++ FK YGKDL
Sbjct: 140 TPSVFPVQGFNSNADAEVLRKAMKGLGCNNSKVISILCQRTNWQRQEISKAFKVMYGKDL 199
Query: 279 ISELKSELTGNLENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTI 458
I ELK EL G+ E++I+ALM + AK+LH A+ G+GT E +IEI+ + +N I+ +
Sbjct: 200 IKELKGELHGDFEDLILALMDAPAIYDAKQLHRAMEGLGTKESVLIEIMTSRTNAQIQQV 259
Query: 459 SAFYEQLYGKSLESDLKGDTSGHFKRLCVSLCMANRDENQGIDXXXXXXXXXXXXXXXXX 638
Y+ L+ K LE DL G+TSGHFKRL VSLC RDE+ D
Sbjct: 260 RDAYKMLFKKDLERDLIGETSGHFKRLLVSLCAGGRDESSQTDGLRANQDARRLLQAGEK 319
Query: 639 QWGTDESIFNSILITRSYQQLR 704
+ GTDES FN+IL ++++ QLR
Sbjct: 320 RLGTDESTFNAILASQNFSQLR 341
Score = 73.7 bits (173), Expect = 1e-13
Identities = 39/141 (27%), Positives = 73/141 (51%), Gaps = 3/141 (2%)
Frame = +3
Query: 153 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLEN---V 323
L+ K GTDE +L + Q + E ++ + ++ E +G++ +
Sbjct: 314 LQAGEKRLGTDESTFNAILASQNFSQLRLVFEEYQKASNHSIEKAIEFEFSGDIRDGLLA 373
Query: 324 IVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESD 503
++A++ P ++AK LHD++ G+GT + +I + T + Y + I ++ LY SLE+
Sbjct: 374 VIAVIRNRPAYFAKLLHDSMKGLGTRDNDLIRLCVTRAEYDMGDIRNMFQSLYRTSLENM 433
Query: 504 LKGDTSGHFKRLCVSLCMANR 566
+KGD SG +K ++L NR
Sbjct: 434 IKGDCSGAYKEGLIALVNGNR 454
>Z29443-7|CAA82571.2| 497|Caenorhabditis elegans Hypothetical
protein T07C4.9a protein.
Length = 497
Score = 169 bits (411), Expect = 2e-42
Identities = 88/202 (43%), Positives = 120/202 (59%)
Frame = +3
Query: 99 TPTVYXXXXXXXXXXXXTLRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDL 278
TP+V+ LRKAMKG G + +I +LC+R QR EI++ FK YGKDL
Sbjct: 182 TPSVFPVQGFNSNADAEVLRKAMKGLGCNNSKVISILCQRTNWQRQEISKAFKVMYGKDL 241
Query: 279 ISELKSELTGNLENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTI 458
I ELK EL G+ E++I+ALM + AK+LH A+ G+GT E +IEI+ + +N I+ +
Sbjct: 242 IKELKGELHGDFEDLILALMDAPAIYDAKQLHRAMEGLGTKESVLIEIMTSRTNAQIQQV 301
Query: 459 SAFYEQLYGKSLESDLKGDTSGHFKRLCVSLCMANRDENQGIDXXXXXXXXXXXXXXXXX 638
Y+ L+ K LE DL G+TSGHFKRL VSLC RDE+ D
Sbjct: 302 RDAYKMLFKKDLERDLIGETSGHFKRLLVSLCAGGRDESSQTDGLRANQDARRLLQAGEK 361
Query: 639 QWGTDESIFNSILITRSYQQLR 704
+ GTDES FN+IL ++++ QLR
Sbjct: 362 RLGTDESTFNAILASQNFSQLR 383
Score = 73.7 bits (173), Expect = 1e-13
Identities = 39/141 (27%), Positives = 73/141 (51%), Gaps = 3/141 (2%)
Frame = +3
Query: 153 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLEN---V 323
L+ K GTDE +L + Q + E ++ + ++ E +G++ +
Sbjct: 356 LQAGEKRLGTDESTFNAILASQNFSQLRLVFEEYQKASNHSIEKAIEFEFSGDIRDGLLA 415
Query: 324 IVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESD 503
++A++ P ++AK LHD++ G+GT + +I + T + Y + I ++ LY SLE+
Sbjct: 416 VIAVIRNRPAYFAKLLHDSMKGLGTRDNDLIRLCVTRAEYDMGDIRNMFQSLYRTSLENM 475
Query: 504 LKGDTSGHFKRLCVSLCMANR 566
+KGD SG +K ++L NR
Sbjct: 476 IKGDCSGAYKEGLIALVNGNR 496
>U40483-1|AAA99775.1| 322|Caenorhabditis elegans NEX1 annexin
protein.
Length = 322
Score = 109 bits (263), Expect = 1e-24
Identities = 56/130 (43%), Positives = 84/130 (64%), Gaps = 1/130 (0%)
Frame = +3
Query: 183 DEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVALM-TPLPHFY 359
++ A+++V+ QR ++ E +K YGKD+I L + +G+LE I ALM TPL +
Sbjct: 31 EKDAVVNVITSISNAQRQQLREPYKLKYGKDIIQALDKKFSGDLEKAIFALMETPLD-YD 89
Query: 360 AKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKRL 539
K+L A+ G+GTDE +IEILC+ + +R I YE+ YGK+LE+D+ GDTSG F+ L
Sbjct: 90 VKQLKAAMKGLGTDEAVLIEILCSRTVDQLRAIRVTYEKEYGKALEADIAGDTSGEFRDL 149
Query: 540 CVSLCMANRD 569
VSL ++D
Sbjct: 150 LVSLVTGSKD 159
Score = 68.9 bits (161), Expect = 3e-12
Identities = 43/155 (27%), Positives = 80/155 (51%), Gaps = 13/155 (8%)
Frame = +3
Query: 153 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVA 332
L+ AMKG GTDE +I++LC R + Q I T++ YGK L +++ + +G +++V+
Sbjct: 93 LKAAMKGLGTDEAVLIEILCSRTVDQLRAIRVTYEKEYGKALEADIAGDTSGEFRDLLVS 152
Query: 333 LMTPLPHFY-----AKELHDAVSGIG--------TDEEAIIEILCTLSNYGIRTISAFYE 473
L+T A+ DAV D + IL T + Y +R + A+++
Sbjct: 153 LVTGSKDGSHDTNDAQAKDDAVRLFADGKAKLAKKDGTHFLHILATQNQYQLRKVFAYFQ 212
Query: 474 QLYGKSLESDLKGDTSGHFKRLCVSLCMANRDENQ 578
+L G S+E ++ + SG ++ +++ A D+ +
Sbjct: 213 ELAGGSIEKSIEKEFSGDLQKSYLTIVRAASDKQK 247
Score = 66.1 bits (154), Expect = 2e-11
Identities = 35/130 (26%), Positives = 67/130 (51%), Gaps = 3/130 (2%)
Frame = +3
Query: 183 DEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLEN---VIVALMTPLPH 353
D + +L + Q ++ F+ G + ++ E +G+L+ IV +
Sbjct: 188 DGTHFLHILATQNQYQLRKVFAYFQELAGGSIEKSIEKEFSGDLQKSYLTIVRAASDKQK 247
Query: 354 FYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFK 533
F+A++LH ++ G+GT + +I ++ T S + I A +++LY KSL +KGDTSG ++
Sbjct: 248 FFAQQLHASMKGLGTRDNDLIRVIVTRSEVDLELIKAEFQELYSKSLADTVKGDTSGAYR 307
Query: 534 RLCVSLCMAN 563
+S+ N
Sbjct: 308 DALLSIINGN 317
Score = 33.1 bits (72), Expect = 0.20
Identities = 17/62 (27%), Positives = 31/62 (50%)
Frame = +3
Query: 153 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVA 332
L +MKG GT + +I V+ R V I F+ Y K L +K + +G + +++
Sbjct: 253 LHASMKGLGTRDNDLIRVIVTRSEVDLELIKAEFQELYSKSLADTVKGDTSGAYRDALLS 312
Query: 333 LM 338
++
Sbjct: 313 II 314
>U00064-7|AAB52702.1| 322|Caenorhabditis elegans Annexin family
protein 1 protein.
Length = 322
Score = 109 bits (263), Expect = 1e-24
Identities = 56/130 (43%), Positives = 84/130 (64%), Gaps = 1/130 (0%)
Frame = +3
Query: 183 DEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVALM-TPLPHFY 359
++ A+++V+ QR ++ E +K YGKD+I L + +G+LE I ALM TPL +
Sbjct: 31 EKDAVVNVITSISNAQRQQLREPYKLKYGKDIIQALDKKFSGDLEKAIFALMETPLD-YD 89
Query: 360 AKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKRL 539
K+L A+ G+GTDE +IEILC+ + +R I YE+ YGK+LE+D+ GDTSG F+ L
Sbjct: 90 VKQLKAAMKGLGTDEAVLIEILCSRTVDQLRAIRVTYEKEYGKALEADIAGDTSGEFRDL 149
Query: 540 CVSLCMANRD 569
VSL ++D
Sbjct: 150 LVSLVTGSKD 159
Score = 68.9 bits (161), Expect = 3e-12
Identities = 43/155 (27%), Positives = 80/155 (51%), Gaps = 13/155 (8%)
Frame = +3
Query: 153 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVA 332
L+ AMKG GTDE +I++LC R + Q I T++ YGK L +++ + +G +++V+
Sbjct: 93 LKAAMKGLGTDEAVLIEILCSRTVDQLRAIRVTYEKEYGKALEADIAGDTSGEFRDLLVS 152
Query: 333 LMTPLPHFY-----AKELHDAVSGIG--------TDEEAIIEILCTLSNYGIRTISAFYE 473
L+T A+ DAV D + IL T + Y +R + A+++
Sbjct: 153 LVTGSKDGSHDTNDAQAKDDAVRLFADGKAKLAKKDGTHFLHILATQNQYQLRKVFAYFQ 212
Query: 474 QLYGKSLESDLKGDTSGHFKRLCVSLCMANRDENQ 578
+L G S+E ++ + SG ++ +++ A D+ +
Sbjct: 213 ELAGGSIEKSIEKEFSGDLQKSYLTIVRAASDKQK 247
Score = 66.1 bits (154), Expect = 2e-11
Identities = 35/130 (26%), Positives = 67/130 (51%), Gaps = 3/130 (2%)
Frame = +3
Query: 183 DEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLEN---VIVALMTPLPH 353
D + +L + Q ++ F+ G + ++ E +G+L+ IV +
Sbjct: 188 DGTHFLHILATQNQYQLRKVFAYFQELAGGSIEKSIEKEFSGDLQKSYLTIVRAASDKQK 247
Query: 354 FYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFK 533
F+A++LH ++ G+GT + +I ++ T S + I A +++LY KSL +KGDTSG ++
Sbjct: 248 FFAQQLHASMKGLGTRDNDLIRVIVTRSEVDLELIKAEFQELYSKSLADTVKGDTSGAYR 307
Query: 534 RLCVSLCMAN 563
+S+ N
Sbjct: 308 DALLSIINGN 317
Score = 33.1 bits (72), Expect = 0.20
Identities = 17/62 (27%), Positives = 31/62 (50%)
Frame = +3
Query: 153 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVA 332
L +MKG GT + +I V+ R V I F+ Y K L +K + +G + +++
Sbjct: 253 LHASMKGLGTRDNDLIRVIVTRSEVDLELIKAEFQELYSKSLADTVKGDTSGAYRDALLS 312
Query: 333 LM 338
++
Sbjct: 313 II 314
>Z32680-3|CAA83598.1| 317|Caenorhabditis elegans Hypothetical
protein C28A5.3 protein.
Length = 317
Score = 95.1 bits (226), Expect = 4e-20
Identities = 52/140 (37%), Positives = 78/140 (55%)
Frame = +3
Query: 153 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVA 332
L KA++ ++ I+++L QR I +KT YGKDL E+K +G+ E+ +VA
Sbjct: 21 LEKALRN--KEKLKILEILVSVNNTQRQMIRTPYKTRYGKDLEDEIKKAFSGDFEDFLVA 78
Query: 333 LMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKG 512
L+ EL+ +V G+GT+E+ +IEIL T +N I Y Y KSLE +
Sbjct: 79 LLQTPTKLDVTELNRSVKGLGTNEKNLIEILTTRTNEEIEAAKNTYFMTYSKSLEDAISA 138
Query: 513 DTSGHFKRLCVSLCMANRDE 572
DTSG F+RL + + A R+E
Sbjct: 139 DTSGDFRRLLIVILQAKREE 158
Score = 49.6 bits (113), Expect = 2e-06
Identities = 25/102 (24%), Positives = 54/102 (52%), Gaps = 3/102 (2%)
Frame = +3
Query: 237 EIAETFKTNYGKDLISELKSELTGNLENVIVALMTPL---PHFYAKELHDAVSGIGTDEE 407
++ E + GK+ + EL+G+ +N++++L+ P ++A +H A G+GT ++
Sbjct: 203 KVIEEVERQSGKEFQKLIDKELSGDFKNLVLSLIETSRNKPRYFANSIHLATKGMGTRDK 262
Query: 408 AIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFK 533
+I IL + S + I ++ L+GK L +K + ++
Sbjct: 263 DLIRILVSRSENDLVIIEHEFQTLFGKPLTQLIKEECKAEYR 304
Score = 32.7 bits (71), Expect = 0.26
Identities = 19/67 (28%), Positives = 31/67 (46%)
Frame = +3
Query: 150 TLRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIV 329
++ A KG GT +K +I +L R + I F+T +GK L +K E + +
Sbjct: 249 SIHLATKGMGTRDKDLIRILVSRSENDLVIIEHEFQTLFGKPLTQLIKEECKAEYRDGLT 308
Query: 330 ALMTPLP 350
L+ P
Sbjct: 309 MLVKGNP 315
>U88315-15|AAB42365.1| 351|Caenorhabditis elegans Annexin family
protein 4 protein.
Length = 351
Score = 70.5 bits (165), Expect = 1e-12
Identities = 42/145 (28%), Positives = 71/145 (48%)
Frame = +3
Query: 150 TLRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIV 329
TLR ++ G T ++ II+ + QR +I ++ Y + L+ +L+ E G +
Sbjct: 33 TLRSSLHGLETKDQTIINTVLYHNNFQRQKILGAYEDMYSRKLLEDLEEECGGFFFEMCQ 92
Query: 330 ALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLK 509
AL P P++ A+ ++ ++S D IEI CT S +R + Y+ Y KSL+ DL
Sbjct: 93 ALFKPAPNYDAQCVYKSLSNRHGDRSVAIEIACTRSPRQMRALRDTYQIDYRKSLDKDLT 152
Query: 510 GDTSGHFKRLCVSLCMANRDENQGI 584
G ++ L NR+E G+
Sbjct: 153 VKVEGVVGKMMHLLLCNNREEGLGV 177
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/41 (26%), Positives = 23/41 (56%)
Frame = +1
Query: 574 TRASMKAQPKPMPKHLPPLVKVNGEPTNQSSTPSLSLAPIS 696
++ + +A PKP P+ PP+ + +PT + P+ P++
Sbjct: 392 SQQATQAPPKPAPQQAPPVQQNPPKPTPSPAPPAQKAQPVT 432
>Z82268-4|CAB05199.1| 741|Caenorhabditis elegans Hypothetical
protein F52B11.3 protein.
Length = 741
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +3
Query: 390 IGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKRLCVSLCMAN 563
+G D I + LS+ R +AF E+ G S+E ++ G C+SLC N
Sbjct: 286 VGKDYYEPICVAADLSSSTCRQQAAF-ERFIGSSIEGEVVASAQGVTISDCISLCFQN 342
>U40799-3|AAA81481.1| 323|Caenorhabditis elegans Hypothetical
protein F42C5.5 protein.
Length = 323
Score = 27.9 bits (59), Expect = 7.5
Identities = 21/78 (26%), Positives = 36/78 (46%)
Frame = +3
Query: 243 AETFKTNYGKDLISELKSELTGNLENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEI 422
A TF+T YG LIS+ ++ T N +++ + + + L + G +E E
Sbjct: 80 ANTFRTPYGNFLISQAPNDST-NADHLHLMWIYNVQTVVCLVLPEEAGGYFVPKEG--ET 136
Query: 423 LCTLSNYGIRTISAFYEQ 476
+ Y I+TI F E+
Sbjct: 137 FTSFQKYQIKTIGIFDEK 154
>AY255668-1|AAQ96605.1| 167|Caenorhabditis elegans MiRP5 protein.
Length = 167
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/61 (26%), Positives = 28/61 (45%)
Frame = +1
Query: 508 KATRRDTSRDCACRCAWPTGTKTRASMKAQPKPMPKHLPPLVKVNGEPTNQSSTPSLSLA 687
K ++ T + R ++ + K + P+P P + +PT +S+TPS S A
Sbjct: 55 KQPKKKTKKSTKSRSKSLKSKQSAVTPKKRASPIPPQ--PAPPSSPKPTEESATPSSSFA 112
Query: 688 P 690
P
Sbjct: 113 P 113
>AF098994-1|AAC67472.2| 167|Caenorhabditis elegans Hypothetical
protein T06A4.2 protein.
Length = 167
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/61 (26%), Positives = 28/61 (45%)
Frame = +1
Query: 508 KATRRDTSRDCACRCAWPTGTKTRASMKAQPKPMPKHLPPLVKVNGEPTNQSSTPSLSLA 687
K ++ T + R ++ + K + P+P P + +PT +S+TPS S A
Sbjct: 55 KQPKKKTKKSTKSRSKSLKSKQSAVTPKKRASPIPPQ--PAPPSSPKPTEESATPSSSFA 112
Query: 688 P 690
P
Sbjct: 113 P 113
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 27.5 bits (58), Expect = 9.9
Identities = 21/110 (19%), Positives = 36/110 (32%)
Frame = +1
Query: 343 PCPTSTLRSSTMLSQELEPTKKPSSRSCARFPTMVSVPYPLFTNNCTARAWNRT*KATRR 522
P T+T+ ++T + T + + PT + P + T T T+
Sbjct: 210 PTTTTTVPTTTTTTPTTTTTTTTTPTTTTTTPTTTTTPATTTSETTTTTPTTTTQTTTKP 269
Query: 523 DTSRDCACRCAWPTGTKTRASMKAQPKPMPKHLPPLVKVNGEPTNQSSTP 672
T+ T T T + A+ K PT ++TP
Sbjct: 270 TTTTTTPTTTPTTTTTPTTTTTTAKTTKSTTTTTKTTKTTSTPTTTTTTP 319
>U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 6 protein.
Length = 559
Score = 27.5 bits (58), Expect = 9.9
Identities = 27/102 (26%), Positives = 42/102 (41%), Gaps = 2/102 (1%)
Frame = +1
Query: 370 STMLSQELEPT-KKPSSR-SCARFPTMVSVPYPLFTNNCTARAWNRT*KATRRDTSRDCA 543
ST + +EPT ++P++R + + T + P TARA +R T
Sbjct: 256 STTTQRYIEPTTQRPTTRRATTKRITTTTTAAPTTPRLTTARATTPLATTSRPTTPSPTT 315
Query: 544 CRCAWPTGTKTRASMKAQPKPMPKHLPPLVKVNGEPTNQSST 669
R P T A+ +A P P PP + + P Q+ T
Sbjct: 316 PRATTPLATTPLATTRAPLPPSP---PP--RTSKRPVTQAPT 352
>U21321-3|AAG00052.2| 655|Caenorhabditis elegans Hypothetical
protein ZK177.4 protein.
Length = 655
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +3
Query: 255 KTNYGKDLISELKSELTGNLENVIVAL 335
KT++G+D +S+ + TG+LE + AL
Sbjct: 437 KTSFGRDSVSQPPMKSTGSLEQQLAAL 463
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,541,525
Number of Sequences: 27780
Number of extensions: 294493
Number of successful extensions: 968
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 955
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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