Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8l20
(686 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41479 Cluster: Uncharacterized 24.1 kDa protein in LEF... 161 2e-38
UniRef50_P41477 Cluster: Late expression factor 4; n=13; Nucleop... 149 8e-35
UniRef50_O10341 Cluster: Uncharacterized 29.3 kDa protein; n=7; ... 122 1e-26
UniRef50_Q65348 Cluster: Lef-4 protein; n=1; Autographa californ... 97 4e-19
UniRef50_Q0N422 Cluster: LEF-4; n=8; Nucleopolyhedrovirus|Rep: L... 74 4e-12
UniRef50_Q99GW9 Cluster: Lef-4; n=3; Nucleopolyhedrovirus|Rep: L... 72 1e-11
UniRef50_A0EYX2 Cluster: Late expression factor 4; n=2; Nucleopo... 55 1e-06
UniRef50_Q9DHD8 Cluster: LEF-4; n=3; Nucleopolyhedrovirus|Rep: L... 54 2e-06
UniRef50_Q9YMN4 Cluster: Late expression factor 4; n=1; Lymantri... 53 6e-06
UniRef50_Q9VAJ7 Cluster: CG12048-PA; n=3; Sophophora|Rep: CG1204... 37 0.40
UniRef50_Q5TMG8 Cluster: ENSANGP00000026248; n=1; Anopheles gamb... 36 0.70
UniRef50_Q6JK98 Cluster: Late expression factor 4; n=3; Nucleopo... 36 0.93
UniRef50_Q67RJ6 Cluster: Anaerobic dimethyl sulfoxide reductase ... 36 0.93
UniRef50_A5AQX4 Cluster: Putative uncharacterized protein; n=1; ... 33 4.9
UniRef50_Q0K415 Cluster: ABC-type transporter, ATPase component;... 33 6.5
UniRef50_Q86BV0 Cluster: Peritrophin 1; n=2; Noctuidae|Rep: Peri... 33 8.6
>UniRef50_P41479 Cluster: Uncharacterized 24.1 kDa protein in
LEF4-P33 intergenic region; n=4;
Nucleopolyhedrovirus|Rep: Uncharacterized 24.1 kDa
protein in LEF4-P33 intergenic region - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 224
Score = 161 bits (390), Expect = 2e-38
Identities = 64/88 (72%), Positives = 79/88 (89%)
Frame = +3
Query: 207 PLGKPMYFPSNINTNKALTDFLRPLCETDQTRKTYAVPWNCNNIFHCNYYNVPLFVVNCP 386
PLG+PMY+PSNI+TN+AL +FLRPLC TD+TR TYAVPWNCN IFHCNY+++P ++++C
Sbjct: 138 PLGEPMYYPSNIDTNEALINFLRPLCATDRTRATYAVPWNCNGIFHCNYFSIPFYILSC- 196
Query: 387 ENTAYSYVSDGCIDFNSSDCPFYPLNVL 470
N AYS+V+DGCIDFNSSDCP YPLNVL
Sbjct: 197 HNNAYSFVNDGCIDFNSSDCPLYPLNVL 224
>UniRef50_P41477 Cluster: Late expression factor 4; n=13;
Nucleopolyhedrovirus|Rep: Late expression factor 4 -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 464
Score = 149 bits (360), Expect = 8e-35
Identities = 67/71 (94%), Positives = 69/71 (97%)
Frame = -2
Query: 685 ELRYVKYKWMPTTELEYDAVNNSFNTLNGPLNGLVILTNLPELLHENIYECVIADTTINV 506
ELRYVKYKWMPTTELEYDAVN SFNTLNGPLNGL+ILT+LPELLHENIYECVI DTTINV
Sbjct: 394 ELRYVKYKWMPTTELEYDAVNKSFNTLNGPLNGLMILTDLPELLHENIYECVITDTTINV 453
Query: 505 LKHRRDRIVPN 473
LKHRRDRIVPN
Sbjct: 454 LKHRRDRIVPN 464
>UniRef50_O10341 Cluster: Uncharacterized 29.3 kDa protein; n=7;
Nucleopolyhedrovirus|Rep: Uncharacterized 29.3 kDa
protein - Orgyia pseudotsugata multicapsid polyhedrosis
virus (OpMNPV)
Length = 279
Score = 122 bits (293), Expect = 1e-26
Identities = 47/89 (52%), Positives = 65/89 (73%), Gaps = 1/89 (1%)
Frame = +3
Query: 207 PLGKPMYFPSNINTNKALTDFLRPLCET-DQTRKTYAVPWNCNNIFHCNYYNVPLFVVNC 383
PLG PMYFPS++ T L D++RPLC + R+TYAVPW+C + HC+Y+++PL V C
Sbjct: 191 PLGDPMYFPSSVGTTDQLRDYIRPLCNGWPRPRETYAVPWDCQRVMHCSYFSLPLHEVTC 250
Query: 384 PENTAYSYVSDGCIDFNSSDCPFYPLNVL 470
+++AYS+ +DGC+ SDCPFYPLN L
Sbjct: 251 NDDSAYSFTADGCVPHYQSDCPFYPLNTL 279
>UniRef50_Q65348 Cluster: Lef-4 protein; n=1; Autographa californica
nucleopolyhedrovirus|Rep: Lef-4 protein - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 61
Score = 97.1 bits (231), Expect = 4e-19
Identities = 45/48 (93%), Positives = 46/48 (95%)
Frame = +3
Query: 543 MFSCSNSGKLVKITRPFNGPLSVLNELFTASYSNSVVGIHLYLTYLNS 686
MFSCSNSGK VKI RPFNGPLSVLN+LFTASYSNSVVGIHLYLTYLNS
Sbjct: 1 MFSCSNSGKSVKIMRPFNGPLSVLNDLFTASYSNSVVGIHLYLTYLNS 48
>UniRef50_Q0N422 Cluster: LEF-4; n=8; Nucleopolyhedrovirus|Rep:
LEF-4 - Clanis bilineata nucleopolyhedrosis virus
Length = 497
Score = 73.7 bits (173), Expect = 4e-12
Identities = 35/70 (50%), Positives = 46/70 (65%)
Frame = -2
Query: 685 ELRYVKYKWMPTTELEYDAVNNSFNTLNGPLNGLVILTNLPELLHENIYECVIADTTINV 506
+ YVKYK + T ELEY+A N +F NGPLN +I+TN + H IYE V+ D +I V
Sbjct: 412 QFNYVKYKSVKTVELEYNAENQTFYDSNGPLNNRIIMTNDVLMTHLGIYEVVVTDHSIMV 471
Query: 505 LKHRRDRIVP 476
+K R DR+VP
Sbjct: 472 IKPRPDRLVP 481
>UniRef50_Q99GW9 Cluster: Lef-4; n=3; Nucleopolyhedrovirus|Rep:
Lef-4 - Helicoverpa armigera nucleopolyhedrovirus G4
Length = 461
Score = 72.1 bits (169), Expect = 1e-11
Identities = 36/72 (50%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Frame = -2
Query: 685 ELRYVKYKWMPTTELEYDAVNNSFNTLNGPL-NGLVILTNLPELLHENIYECVIADTTIN 509
E YVKYK + T E+EYD+VNN F TLNGP+ N +I+ + ELLH IYE + +
Sbjct: 390 EGHYVKYKHIKTIEVEYDSVNNRFVTLNGPVENKKIIMQSKLELLHGQIYEANMDADNLF 449
Query: 508 VLKHRRDRIVPN 473
++K R+DR+VPN
Sbjct: 450 IMKIRKDRLVPN 461
>UniRef50_A0EYX2 Cluster: Late expression factor 4; n=2;
Nucleopolyhedrovirus|Rep: Late expression factor 4 -
Ecotropis obliqua NPV
Length = 471
Score = 55.2 bits (127), Expect = 1e-06
Identities = 31/70 (44%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Frame = -2
Query: 682 LRYVKYKWMPTTELEYDAVNNSFNTLNGPLNGLVI--LTNLPELLHENIYECVIADTTIN 509
L+YVKYK+ T ELEYD NN F +L L I N +L+ + IYEC I + I
Sbjct: 397 LKYVKYKYKKTIELEYDKKNNKFCSLEKMLCDYTINKRDNNIQLMDKRIYECHIDNNVIT 456
Query: 508 VLKHRRDRIV 479
V++ R+DR V
Sbjct: 457 VIQLRQDRFV 466
>UniRef50_Q9DHD8 Cluster: LEF-4; n=3; Nucleopolyhedrovirus|Rep:
LEF-4 - Spodoptera litura multicapsid
nucleopolyhedrovirus (SpltMNPV)
Length = 475
Score = 54.4 bits (125), Expect = 2e-06
Identities = 28/72 (38%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Frame = -2
Query: 685 ELRYVKYKWMPTTELEYDAVNNSFNTLNGPLNGLVILTNLPELLHE-NIYECVIADTTIN 509
+L+YV YK+ TTE+EY+A + F TL+GP+ +L + +IYE +I I+
Sbjct: 404 DLKYVGYKYPKTTEVEYEARKDRFLTLDGPVIASERYVRDGVVLKDGSIYEALINSQRID 463
Query: 508 VLKHRRDRIVPN 473
++K R DR++PN
Sbjct: 464 IIKARPDRLIPN 475
>UniRef50_Q9YMN4 Cluster: Late expression factor 4; n=1; Lymantria
dispar MNPV|Rep: Late expression factor 4 - Lymantria
dispar multicapsid nuclear polyhedrosis virus (LdMNPV)
Length = 485
Score = 53.2 bits (122), Expect = 6e-06
Identities = 30/69 (43%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Frame = -2
Query: 682 LRYVKYKWMPTTELEYDAVNNSFNTLNGPLNGLVILTNLPELL-HENIYECVIADTTINV 506
LRYVKYK T ELEYD + F +L GPL + +L H +YE V+ D ++V
Sbjct: 408 LRYVKYKSAKTVELEYDETLDRFCSLEGPLTDHETRNDAGCVLRHGAVYETVLRDKCVHV 467
Query: 505 LKHRRDRIV 479
LK R DR++
Sbjct: 468 LKLRPDRLL 476
>UniRef50_Q9VAJ7 Cluster: CG12048-PA; n=3; Sophophora|Rep:
CG12048-PA - Drosophila melanogaster (Fruit fly)
Length = 550
Score = 37.1 bits (82), Expect = 0.40
Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Frame = +3
Query: 234 SNINTNKALTDFLRPLCETDQTRKTYAVPWNCNNIFH-CNYYNVPLFVVNCPENTAYSYV 410
SN NK LTD L L D + + C ++FH C + P VNC E Y +
Sbjct: 177 SNFFGNKTLTDELHMLDHLDLREVYKFIQFRCQDLFHTCRWRGNP---VNCCEVIEYQFT 233
Query: 411 SDG-CIDFNSSDCP 449
G C FN+ P
Sbjct: 234 EAGLCFVFNTEISP 247
>UniRef50_Q5TMG8 Cluster: ENSANGP00000026248; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000026248 - Anopheles gambiae
str. PEST
Length = 160
Score = 36.3 bits (80), Expect = 0.70
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +3
Query: 282 CETDQTRKTYAVPWNCNNIFHCNYYNVPLFVVNCPENTAYSYVSDGCIDFNSSDCP 449
CET + + Y P CN ++C V ++ CP Y+ +D C + S+CP
Sbjct: 30 CETARDGQWYTFPACCNGAYNCLGGGVWDMML-CPAEFVYNSQTDECAPYTGSECP 84
>UniRef50_Q6JK98 Cluster: Late expression factor 4; n=3;
Nucleopolyhedrovirus|Rep: Late expression factor 4 -
Neodiprion sertifer NPV
Length = 477
Score = 35.9 bits (79), Expect = 0.93
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = -2
Query: 670 KYKWMPTTELEYDAVNNSFNTLNGPLNGLVILTNLPELLHENIYECVIADT-TINVLKHR 494
K K T EL+Y N + N + L+ EL NIYEC I++ + ++KHR
Sbjct: 411 KLKSKITYELKYIGNNTFHDNCNKKIRSLIDCDC--EL--NNIYECTISNNIVVEIIKHR 466
Query: 493 RDRIVPN 473
DR PN
Sbjct: 467 TDRYFPN 473
>UniRef50_Q67RJ6 Cluster: Anaerobic dimethyl sulfoxide reductase
subunit B; n=1; Symbiobacterium thermophilum|Rep:
Anaerobic dimethyl sulfoxide reductase subunit B -
Symbiobacterium thermophilum
Length = 185
Score = 35.9 bits (79), Expect = 0.93
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = +3
Query: 309 YAVPWNCNNIFHCNYYNVPLFVVNCPENTAYSYVSDGCIDFNSSDC 446
Y PW N CN+ + P V NCP +Y DG + + C
Sbjct: 46 YPKPWIFNISISCNHCSDPRCVTNCPTGASYKREEDGLVLVDQEAC 91
>UniRef50_A5AQX4 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 130
Score = 33.5 bits (73), Expect = 4.9
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +1
Query: 445 ARSIRLTCFNLA-RFGRDDVSTRLLSCPRSHIRKCFRAATPASWLKSRDRSM 597
A S R CF+ RFGR V RL C R+H + +WLK + +S+
Sbjct: 35 AFSSRSMCFSYRLRFGRGSVEVRLRGCVRAHXSRNPSVRRLEAWLKLQGKSI 86
>UniRef50_Q0K415 Cluster: ABC-type transporter, ATPase component;
n=2; Proteobacteria|Rep: ABC-type transporter, ATPase
component - Ralstonia eutropha (strain ATCC 17699 / H16
/ DSM 428 / Stanier 337)(Cupriavidus necator (strain
ATCC 17699 / H16 / DSM 428 / Stanier337))
Length = 382
Score = 33.1 bits (72), Expect = 6.5
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = -1
Query: 566 AGVAARKHLRMCDRGHDNKRVETSSRPNRAKLKHV 462
+G+ + H R+ D HD +R++ RP KL+H+
Sbjct: 275 SGLISFPHARLADASHDGERLDVYVRPEHIKLEHL 309
>UniRef50_Q86BV0 Cluster: Peritrophin 1; n=2; Noctuidae|Rep:
Peritrophin 1 - Mamestra configurata (bertha armyworm)
Length = 1917
Score = 32.7 bits (71), Expect = 8.6
Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +3
Query: 279 LCETDQTRKTYAVPWNCNNIFHC-NYYNVPLFVVNCPENTAYSYVSDGC 422
+C D + NCN + C N +PL CP NT Y+ VS C
Sbjct: 1589 ICAVDNSEGVLIAHENCNQFYQCVNGRPIPL---KCPVNTLYNPVSQVC 1634
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 519,308,037
Number of Sequences: 1657284
Number of extensions: 9236911
Number of successful extensions: 26730
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 25837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26716
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53719013270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -