Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8l20
         (686 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    22   4.1  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    22   4.1  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   9.5  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   9.5  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   9.5  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   9.5  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   9.5  

>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 13/51 (25%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
 Frame = -2

Query: 682 LRYVKYKWMPTTELEYDAVNNSFNTLNGPLNGLVI----LTNLPELLHENI 542
           L ++ Y      +L YD VNN F         +++    + +L +LL E +
Sbjct: 182 LHFLTYNLSLGIKLRYDDVNNLFRIEESEEKNIIVSLRQIGSLSQLLSETV 232


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 13/51 (25%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
 Frame = -2

Query: 682 LRYVKYKWMPTTELEYDAVNNSFNTLNGPLNGLVI----LTNLPELLHENI 542
           L ++ Y      +L YD VNN F         +++    + +L +LL E +
Sbjct: 182 LHFLTYNLSLGIKLRYDDVNNLFRIEESEEKNIIVSLRQIGSLSQLLSETV 232


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
 Frame = -1

Query: 521 HDNKRVETSSRPNRAKLKHVKRIERAV*A-VKVNTTIANIRIRRVFGTVDDKQRNIVIIA 345
           HD +R  +     RAK+K VK     V   V   +      + +V+G +   Q NI I  
Sbjct: 266 HDTRRASSRGIIPRAKIKTVKMTLVIVFVFVLCWSPYIVFDLLQVYGHIPKTQTNIAIAT 325

Query: 344 M 342
           +
Sbjct: 326 L 326


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = -2

Query: 595 LNGLVILTNLPELLHENIYECV 530
           +NG +I+ N+     +  Y+CV
Sbjct: 561 INGTLIIENVERASDQATYDCV 582


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/39 (23%), Positives = 20/39 (51%)
 Frame = +3

Query: 246 TNKALTDFLRPLCETDQTRKTYAVPWNCNNIFHCNYYNV 362
           T + + +FL+ +   DQ + ++ +      + H NYY +
Sbjct: 312 TPEEMMEFLKSVFRLDQDQCSHRIVREHLGLKHDNYYEL 350


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/39 (23%), Positives = 20/39 (51%)
 Frame = +3

Query: 246 TNKALTDFLRPLCETDQTRKTYAVPWNCNNIFHCNYYNV 362
           T + + +FL+ +   DQ + ++ +      + H NYY +
Sbjct: 545 TPEEMMEFLKSVFRLDQDQCSHRIVREHLGLKHDNYYEL 583


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/39 (23%), Positives = 20/39 (51%)
 Frame = +3

Query: 246 TNKALTDFLRPLCETDQTRKTYAVPWNCNNIFHCNYYNV 362
           T + + +FL+ +   DQ + ++ +      + H NYY +
Sbjct: 545 TPEEMMEFLKSVFRLDQDQCSHRIVREHLGLKHDNYYEL 583


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,662
Number of Sequences: 336
Number of extensions: 2499
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)