Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8l12
         (718 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          23   1.9  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          22   4.3  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           22   4.3  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    22   5.7  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   7.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   7.6  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/41 (26%), Positives = 18/41 (43%)
 Frame = +1

Query: 412 SHFMTNTPKSGGSPPKAKAGRPRKIKIDTEPEGPGDHRHRK 534
           +H        G   P+  A  P+K ++  E E   DH+ +K
Sbjct: 191 AHLRKGRGAIGAYGPEKSASIPKKKEVKEEIEDEPDHKWKK 231


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -1

Query: 301 SHWNCRQYRQRPW 263
           S WNC QY   P+
Sbjct: 50  SDWNCPQYNAPPY 62


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -1

Query: 301 SHWNCRQYRQRPW 263
           S WNC QY   P+
Sbjct: 41  SDWNCPQYNAPPY 53


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = -1

Query: 625 LCNVEMLQI*ILSFVLNLFLPEVLHLLLAQFFYVCD 518
           LCN+  +   I  F   LF+     + + QF+Y  D
Sbjct: 221 LCNLCQVANSIYGFQNFLFVLSTFSICITQFYYCYD 256


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +2

Query: 128 ITLSCSTSVQLLVSGLFEYIF 190
           +  +CS+ +QL  +GL   I+
Sbjct: 933 VCATCSSDIQLFFAGLISAIY 953


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +2

Query: 128 ITLSCSTSVQLLVSGLFEYIF 190
           +  +CS+ +QL  +GL   I+
Sbjct: 933 VCATCSSDIQLFFAGLISAIY 953


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,455
Number of Sequences: 336
Number of extensions: 3927
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)