Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8l12
(718 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M89907-1|AAA80560.1| 769|Homo sapiens transcription activator p... 126 8e-29
M88163-1|AAA80559.1| 976|Homo sapiens transcription activator p... 126 8e-29
BC117447-1|AAI17448.1| 1054|Homo sapiens SWI/SNF related, matrix... 126 8e-29
AL138745-3|CAI42614.1| 1005|Homo sapiens SWI/SNF related, matrix... 126 8e-29
AL138745-2|CAI42612.1| 1042|Homo sapiens SWI/SNF related, matrix... 126 8e-29
AL138745-1|CAI42613.1| 1054|Homo sapiens SWI/SNF related, matrix... 126 8e-29
AL022577-3|CAI42684.1| 1005|Homo sapiens SWI/SNF related, matrix... 126 8e-29
AL022577-2|CAI42682.1| 1042|Homo sapiens SWI/SNF related, matrix... 126 8e-29
AL022577-1|CAI42683.1| 1054|Homo sapiens SWI/SNF related, matrix... 126 8e-29
BC023144-1|AAH23144.1| 1052|Homo sapiens SWI/SNF related, matrix... 122 1e-27
AC104685-2|AAY40965.1| 207|Homo sapiens unknown protein. 122 1e-27
AB010882-1|BAA25173.1| 1052|Homo sapiens hSNF2H protein. 122 1e-27
BC146785-1|AAI46786.1| 1556|Homo sapiens INOC1 protein protein. 43 0.001
AB033085-1|BAA86573.1| 1561|Homo sapiens KIAA1259 protein protein. 43 0.001
D26155-1|BAA05142.1| 1572|Homo sapiens transcriptional activator... 42 0.002
AL359076-4|CAI12968.1| 1572|Homo sapiens SWI/SNF related, matrix... 42 0.002
AL359076-3|CAI12967.1| 1590|Homo sapiens SWI/SNF related, matrix... 42 0.002
AL138755-9|CAI14600.1| 1572|Homo sapiens SWI/SNF related, matrix... 42 0.002
AL138755-8|CAI14599.1| 1590|Homo sapiens SWI/SNF related, matrix... 42 0.002
X72889-1|CAA51407.1| 1586|Homo sapiens HBRM protein. 41 0.004
U29175-1|AAB40977.1| 1647|Homo sapiens transcriptional activator... 41 0.004
D26156-1|BAA05143.1| 1647|Homo sapiens transcriptional activator... 41 0.004
BC150298-1|AAI50299.1| 1647|Homo sapiens SWI/SNF related, matrix... 41 0.004
AF254822-2|AAG24789.1| 1647|Homo sapiens SMARCA4 isoform 1 protein. 41 0.004
AF254822-1|AAG24790.1| 1679|Homo sapiens SMARCA4 isoform 2 protein. 41 0.004
AB209313-1|BAD92550.1| 1164|Homo sapiens SWI/SNF-related matrix-... 41 0.004
BX538033-1|CAD97978.1| 822|Homo sapiens hypothetical protein pr... 40 0.009
AL138759-1|CAD13191.1| 838|Homo sapiens helicase, lymphoid-spec... 40 0.009
AF155827-1|AAF82262.1| 838|Homo sapiens proliferation-associate... 40 0.009
AB113249-1|BAD24805.1| 782|Homo sapiens lymphoid specific helic... 40 0.009
AB113248-1|BAD24804.1| 809|Homo sapiens lymphoid specific helic... 40 0.009
AB102723-1|BAD10851.1| 884|Homo sapiens lymphoid specific helic... 40 0.009
AB102722-1|BAD10850.1| 315|Homo sapiens lymphoid specific helic... 40 0.009
AB102721-1|BAD10849.1| 740|Homo sapiens lymphoid specific helic... 40 0.009
AB102720-1|BAD10848.1| 345|Homo sapiens lymphoid specific helic... 40 0.009
AB102719-1|BAD10847.1| 708|Homo sapiens lymphoid specific helic... 40 0.009
AB102718-1|BAD10846.1| 806|Homo sapiens lymphoid specific helic... 40 0.009
AK128030-1|BAC87237.1| 2427|Homo sapiens protein ( Homo sapiens ... 35 0.25
AF143946-1|AAD39760.1| 2971|Homo sapiens transcriptional activat... 35 0.25
AB002307-1|BAA20768.2| 3053|Homo sapiens KIAA0309 protein. 35 0.25
BC150291-1|AAI50292.1| 1731|Homo sapiens Unknown (protein for IM... 33 0.77
AY044869-1|AAK97789.1| 3124|Homo sapiens p400 SWI2/SNF2-related ... 33 0.77
AB040931-1|BAA96022.1| 1731|Homo sapiens KIAA1498 protein protein. 33 0.77
AK000368-1|BAA91116.1| 251|Homo sapiens protein ( Homo sapiens ... 32 1.8
AB037837-1|BAA92654.1| 1967|Homo sapiens KIAA1416 protein protein. 32 1.8
X91103-1|CAA62558.1| 338|Homo sapiens hr44 protein. 31 3.1
AY034072-1|AAK56405.1| 2713|Homo sapiens chromodomain helicase D... 31 3.1
AL121674-2|CAI21744.1| 2715|Homo sapiens chromodomain helicase D... 31 3.1
AL031669-3|CAI22255.1| 2715|Homo sapiens chromodomain helicase D... 31 3.1
AL031667-8|CAI42983.1| 524|Homo sapiens chromodomain helicase D... 31 3.1
AL031667-2|CAI42977.1| 2715|Homo sapiens chromodomain helicase D... 31 3.1
AF525085-1|AAN59903.1| 488|Homo sapiens RIGB protein. 31 3.1
BT007050-1|AAP35699.1| 501|Homo sapiens chromodomain helicase D... 31 5.4
BC020810-1|AAH20810.1| 501|Homo sapiens chromodomain helicase D... 31 5.4
BC007347-1|AAH07347.1| 501|Homo sapiens chromodomain helicase D... 31 5.4
AF006514-1|AAB87382.1| 1739|Homo sapiens CHD2 protein. 31 5.4
AB046784-1|BAB13390.3| 2432|Homo sapiens KIAA1564 protein protein. 31 5.4
U91543-1|AAC39923.1| 2000|Homo sapiens zinc-finger helicase prot... 30 7.2
DQ333316-1|ABD24032.1| 2881|Homo sapiens PRIC320 isoform 1 protein. 30 7.2
AY647157-1|AAT66509.1| 2881|Homo sapiens KISH2 protein. 30 7.2
AY243500-1|AAQ24287.1| 2897|Homo sapiens chromatin remodeling fa... 30 7.2
AF006515-1|AAB87383.1| 1944|Homo sapiens CHD3 protein. 30 7.2
AB002306-1|BAA20767.3| 2759|Homo sapiens KIAA0308 protein. 30 7.2
>M89907-1|AAA80560.1| 769|Homo sapiens transcription activator
protein.
Length = 769
Score = 126 bits (304), Expect = 8e-29
Identities = 61/124 (49%), Positives = 80/124 (64%), Gaps = 3/124 (2%)
Frame = +1
Query: 340 DFESKIETDRSKRFDFLLKQTEIFSHFMT-NTPKSGGSPPKAKAGRPRKIKIDTEPE--G 510
++E K++ DR+KRF+FLLKQTE+F+HF+ + KS SP K GRPR IK D +
Sbjct: 82 EYEEKMKADRAKRFEFLLKQTELFAHFIQPSAQKSPTSPLNMKLGRPR-IKKDEKQSLIS 140
Query: 511 PGDHRHRKTXXXXXXXXXXXTNSKQKTIFRFEASPHYIKNGEMRDYQVRGLNWMISLYEN 690
GD+RHR+T + RFE SP Y+K G +RDYQ+RGLNW+ISLYEN
Sbjct: 141 AGDYRHRRTEQEEDEELLSESRKTSNVCIRFEVSPSYVKGGPLRDYQIRGLNWLISLYEN 200
Query: 691 GING 702
G+NG
Sbjct: 201 GVNG 204
>M88163-1|AAA80559.1| 976|Homo sapiens transcription activator
protein.
Length = 976
Score = 126 bits (304), Expect = 8e-29
Identities = 61/124 (49%), Positives = 80/124 (64%), Gaps = 3/124 (2%)
Frame = +1
Query: 340 DFESKIETDRSKRFDFLLKQTEIFSHFMT-NTPKSGGSPPKAKAGRPRKIKIDTEPE--G 510
++E K++ DR+KRF+FLLKQTE+F+HF+ + KS SP K GRPR IK D +
Sbjct: 4 EYEEKMKADRAKRFEFLLKQTELFAHFIQPSAQKSPTSPLNMKLGRPR-IKKDEKQSLIS 62
Query: 511 PGDHRHRKTXXXXXXXXXXXTNSKQKTIFRFEASPHYIKNGEMRDYQVRGLNWMISLYEN 690
GD+RHR+T + RFE SP Y+K G +RDYQ+RGLNW+ISLYEN
Sbjct: 63 AGDYRHRRTEQEEDEELLSESRKTSNVCIRFEVSPSYVKGGPLRDYQIRGLNWLISLYEN 122
Query: 691 GING 702
G+NG
Sbjct: 123 GVNG 126
>BC117447-1|AAI17448.1| 1054|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1054
Score = 126 bits (304), Expect = 8e-29
Identities = 61/124 (49%), Positives = 80/124 (64%), Gaps = 3/124 (2%)
Frame = +1
Query: 340 DFESKIETDRSKRFDFLLKQTEIFSHFMT-NTPKSGGSPPKAKAGRPRKIKIDTEPE--G 510
++E K++ DR+KRF+FLLKQTE+F+HF+ + KS SP K GRPR IK D +
Sbjct: 82 EYEEKMKADRAKRFEFLLKQTELFAHFIQPSAQKSPTSPLNMKLGRPR-IKKDEKQSLIS 140
Query: 511 PGDHRHRKTXXXXXXXXXXXTNSKQKTIFRFEASPHYIKNGEMRDYQVRGLNWMISLYEN 690
GD+RHR+T + RFE SP Y+K G +RDYQ+RGLNW+ISLYEN
Sbjct: 141 AGDYRHRRTEQEEDEELLSESRKTSNVCIRFEVSPSYVKGGPLRDYQIRGLNWLISLYEN 200
Query: 691 GING 702
G+NG
Sbjct: 201 GVNG 204
>AL138745-3|CAI42614.1| 1005|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1005
Score = 126 bits (304), Expect = 8e-29
Identities = 61/124 (49%), Positives = 80/124 (64%), Gaps = 3/124 (2%)
Frame = +1
Query: 340 DFESKIETDRSKRFDFLLKQTEIFSHFMT-NTPKSGGSPPKAKAGRPRKIKIDTEPE--G 510
++E K++ DR+KRF+FLLKQTE+F+HF+ + KS SP K GRPR IK D +
Sbjct: 61 EYEEKMKADRAKRFEFLLKQTELFAHFIQPSAQKSPTSPLNMKLGRPR-IKKDEKQSLIS 119
Query: 511 PGDHRHRKTXXXXXXXXXXXTNSKQKTIFRFEASPHYIKNGEMRDYQVRGLNWMISLYEN 690
GD+RHR+T + RFE SP Y+K G +RDYQ+RGLNW+ISLYEN
Sbjct: 120 AGDYRHRRTEQEEDEELLSESRKTSNVCIRFEVSPSYVKGGPLRDYQIRGLNWLISLYEN 179
Query: 691 GING 702
G+NG
Sbjct: 180 GVNG 183
>AL138745-2|CAI42612.1| 1042|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1042
Score = 126 bits (304), Expect = 8e-29
Identities = 61/124 (49%), Positives = 80/124 (64%), Gaps = 3/124 (2%)
Frame = +1
Query: 340 DFESKIETDRSKRFDFLLKQTEIFSHFMT-NTPKSGGSPPKAKAGRPRKIKIDTEPE--G 510
++E K++ DR+KRF+FLLKQTE+F+HF+ + KS SP K GRPR IK D +
Sbjct: 82 EYEEKMKADRAKRFEFLLKQTELFAHFIQPSAQKSPTSPLNMKLGRPR-IKKDEKQSLIS 140
Query: 511 PGDHRHRKTXXXXXXXXXXXTNSKQKTIFRFEASPHYIKNGEMRDYQVRGLNWMISLYEN 690
GD+RHR+T + RFE SP Y+K G +RDYQ+RGLNW+ISLYEN
Sbjct: 141 AGDYRHRRTEQEEDEELLSESRKTSNVCIRFEVSPSYVKGGPLRDYQIRGLNWLISLYEN 200
Query: 691 GING 702
G+NG
Sbjct: 201 GVNG 204
>AL138745-1|CAI42613.1| 1054|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1054
Score = 126 bits (304), Expect = 8e-29
Identities = 61/124 (49%), Positives = 80/124 (64%), Gaps = 3/124 (2%)
Frame = +1
Query: 340 DFESKIETDRSKRFDFLLKQTEIFSHFMT-NTPKSGGSPPKAKAGRPRKIKIDTEPE--G 510
++E K++ DR+KRF+FLLKQTE+F+HF+ + KS SP K GRPR IK D +
Sbjct: 82 EYEEKMKADRAKRFEFLLKQTELFAHFIQPSAQKSPTSPLNMKLGRPR-IKKDEKQSLIS 140
Query: 511 PGDHRHRKTXXXXXXXXXXXTNSKQKTIFRFEASPHYIKNGEMRDYQVRGLNWMISLYEN 690
GD+RHR+T + RFE SP Y+K G +RDYQ+RGLNW+ISLYEN
Sbjct: 141 AGDYRHRRTEQEEDEELLSESRKTSNVCIRFEVSPSYVKGGPLRDYQIRGLNWLISLYEN 200
Query: 691 GING 702
G+NG
Sbjct: 201 GVNG 204
>AL022577-3|CAI42684.1| 1005|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1005
Score = 126 bits (304), Expect = 8e-29
Identities = 61/124 (49%), Positives = 80/124 (64%), Gaps = 3/124 (2%)
Frame = +1
Query: 340 DFESKIETDRSKRFDFLLKQTEIFSHFMT-NTPKSGGSPPKAKAGRPRKIKIDTEPE--G 510
++E K++ DR+KRF+FLLKQTE+F+HF+ + KS SP K GRPR IK D +
Sbjct: 61 EYEEKMKADRAKRFEFLLKQTELFAHFIQPSAQKSPTSPLNMKLGRPR-IKKDEKQSLIS 119
Query: 511 PGDHRHRKTXXXXXXXXXXXTNSKQKTIFRFEASPHYIKNGEMRDYQVRGLNWMISLYEN 690
GD+RHR+T + RFE SP Y+K G +RDYQ+RGLNW+ISLYEN
Sbjct: 120 AGDYRHRRTEQEEDEELLSESRKTSNVCIRFEVSPSYVKGGPLRDYQIRGLNWLISLYEN 179
Query: 691 GING 702
G+NG
Sbjct: 180 GVNG 183
>AL022577-2|CAI42682.1| 1042|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1042
Score = 126 bits (304), Expect = 8e-29
Identities = 61/124 (49%), Positives = 80/124 (64%), Gaps = 3/124 (2%)
Frame = +1
Query: 340 DFESKIETDRSKRFDFLLKQTEIFSHFMT-NTPKSGGSPPKAKAGRPRKIKIDTEPE--G 510
++E K++ DR+KRF+FLLKQTE+F+HF+ + KS SP K GRPR IK D +
Sbjct: 82 EYEEKMKADRAKRFEFLLKQTELFAHFIQPSAQKSPTSPLNMKLGRPR-IKKDEKQSLIS 140
Query: 511 PGDHRHRKTXXXXXXXXXXXTNSKQKTIFRFEASPHYIKNGEMRDYQVRGLNWMISLYEN 690
GD+RHR+T + RFE SP Y+K G +RDYQ+RGLNW+ISLYEN
Sbjct: 141 AGDYRHRRTEQEEDEELLSESRKTSNVCIRFEVSPSYVKGGPLRDYQIRGLNWLISLYEN 200
Query: 691 GING 702
G+NG
Sbjct: 201 GVNG 204
>AL022577-1|CAI42683.1| 1054|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1054
Score = 126 bits (304), Expect = 8e-29
Identities = 61/124 (49%), Positives = 80/124 (64%), Gaps = 3/124 (2%)
Frame = +1
Query: 340 DFESKIETDRSKRFDFLLKQTEIFSHFMT-NTPKSGGSPPKAKAGRPRKIKIDTEPE--G 510
++E K++ DR+KRF+FLLKQTE+F+HF+ + KS SP K GRPR IK D +
Sbjct: 82 EYEEKMKADRAKRFEFLLKQTELFAHFIQPSAQKSPTSPLNMKLGRPR-IKKDEKQSLIS 140
Query: 511 PGDHRHRKTXXXXXXXXXXXTNSKQKTIFRFEASPHYIKNGEMRDYQVRGLNWMISLYEN 690
GD+RHR+T + RFE SP Y+K G +RDYQ+RGLNW+ISLYEN
Sbjct: 141 AGDYRHRRTEQEEDEELLSESRKTSNVCIRFEVSPSYVKGGPLRDYQIRGLNWLISLYEN 200
Query: 691 GING 702
G+NG
Sbjct: 201 GVNG 204
>BC023144-1|AAH23144.1| 1052|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1052
Score = 122 bits (294), Expect = 1e-27
Identities = 62/123 (50%), Positives = 81/123 (65%), Gaps = 3/123 (2%)
Frame = +1
Query: 343 FESKIETDRSKRFDFLLKQTEIFSHFMTNTP-KSGGSPPKAKAGRPRKIKIDTEPE--GP 513
+E K++TDR+ RF++LLKQTE+F+HF+ K+ SP K K GRPR IK D +
Sbjct: 80 YEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRPR-IKKDEKQNLLSV 138
Query: 514 GDHRHRKTXXXXXXXXXXXTNSKQKTIFRFEASPHYIKNGEMRDYQVRGLNWMISLYENG 693
GD+RHR+T ++ RFE SP Y+K G++RDYQVRGLNW+ISLYENG
Sbjct: 139 GDYRHRRTEQEEDEELLTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENG 198
Query: 694 ING 702
ING
Sbjct: 199 ING 201
>AC104685-2|AAY40965.1| 207|Homo sapiens unknown protein.
Length = 207
Score = 122 bits (294), Expect = 1e-27
Identities = 62/123 (50%), Positives = 81/123 (65%), Gaps = 3/123 (2%)
Frame = +1
Query: 343 FESKIETDRSKRFDFLLKQTEIFSHFMTNTP-KSGGSPPKAKAGRPRKIKIDTEPE--GP 513
+E K++TDR+ RF++LLKQTE+F+HF+ K+ SP K K GRPR IK D +
Sbjct: 80 YEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRPR-IKKDEKQNLLSV 138
Query: 514 GDHRHRKTXXXXXXXXXXXTNSKQKTIFRFEASPHYIKNGEMRDYQVRGLNWMISLYENG 693
GD+RHR+T ++ RFE SP Y+K G++RDYQVRGLNW+ISLYENG
Sbjct: 139 GDYRHRRTEQEEDEELLTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENG 198
Query: 694 ING 702
ING
Sbjct: 199 ING 201
>AB010882-1|BAA25173.1| 1052|Homo sapiens hSNF2H protein.
Length = 1052
Score = 122 bits (294), Expect = 1e-27
Identities = 62/123 (50%), Positives = 81/123 (65%), Gaps = 3/123 (2%)
Frame = +1
Query: 343 FESKIETDRSKRFDFLLKQTEIFSHFMTNTP-KSGGSPPKAKAGRPRKIKIDTEPE--GP 513
+E K++TDR+ RF++LLKQTE+F+HF+ K+ SP K K GRPR IK D +
Sbjct: 80 YEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRPR-IKKDEKQNLLSV 138
Query: 514 GDHRHRKTXXXXXXXXXXXTNSKQKTIFRFEASPHYIKNGEMRDYQVRGLNWMISLYENG 693
GD+RHR+T ++ RFE SP Y+K G++RDYQVRGLNW+ISLYENG
Sbjct: 139 GDYRHRRTEQEEDEELLTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENG 198
Query: 694 ING 702
ING
Sbjct: 199 ING 201
>BC146785-1|AAI46786.1| 1556|Homo sapiens INOC1 protein protein.
Length = 1556
Score = 43.2 bits (97), Expect = 0.001
Identities = 15/27 (55%), Positives = 23/27 (85%)
Frame = +1
Query: 622 IKNGEMRDYQVRGLNWMISLYENGING 702
I NG+++ YQ++G+NW+ +LYE GING
Sbjct: 513 IFNGKLKGYQLKGMNWLANLYEQGING 539
>AB033085-1|BAA86573.1| 1561|Homo sapiens KIAA1259 protein protein.
Length = 1561
Score = 43.2 bits (97), Expect = 0.001
Identities = 15/27 (55%), Positives = 23/27 (85%)
Frame = +1
Query: 622 IKNGEMRDYQVRGLNWMISLYENGING 702
I NG+++ YQ++G+NW+ +LYE GING
Sbjct: 518 IFNGKLKGYQLKGMNWLANLYEQGING 544
>D26155-1|BAA05142.1| 1572|Homo sapiens transcriptional activator
hSNF2a protein.
Length = 1572
Score = 42.3 bits (95), Expect = 0.002
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +1
Query: 598 RFEASPHYIKNGEMRDYQVRGLNWMISLYENGING 702
R E + NG ++ YQ++GL WM+SLY N +NG
Sbjct: 711 RVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNG 745
>AL359076-4|CAI12968.1| 1572|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1572
Score = 42.3 bits (95), Expect = 0.002
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +1
Query: 598 RFEASPHYIKNGEMRDYQVRGLNWMISLYENGING 702
R E + NG ++ YQ++GL WM+SLY N +NG
Sbjct: 711 RVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNG 745
>AL359076-3|CAI12967.1| 1590|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1590
Score = 42.3 bits (95), Expect = 0.002
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +1
Query: 598 RFEASPHYIKNGEMRDYQVRGLNWMISLYENGING 702
R E + NG ++ YQ++GL WM+SLY N +NG
Sbjct: 711 RVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNG 745
>AL138755-9|CAI14600.1| 1572|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1572
Score = 42.3 bits (95), Expect = 0.002
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +1
Query: 598 RFEASPHYIKNGEMRDYQVRGLNWMISLYENGING 702
R E + NG ++ YQ++GL WM+SLY N +NG
Sbjct: 711 RVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNG 745
>AL138755-8|CAI14599.1| 1590|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1590
Score = 42.3 bits (95), Expect = 0.002
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +1
Query: 598 RFEASPHYIKNGEMRDYQVRGLNWMISLYENGING 702
R E + NG ++ YQ++GL WM+SLY N +NG
Sbjct: 711 RVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNG 745
>X72889-1|CAA51407.1| 1586|Homo sapiens HBRM protein.
Length = 1586
Score = 41.1 bits (92), Expect = 0.004
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = +1
Query: 628 NGEMRDYQVRGLNWMISLYENGING 702
NG ++ YQ++GL WM+SLY N +NG
Sbjct: 717 NGTLKHYQLQGLEWMVSLYNNNLNG 741
>U29175-1|AAB40977.1| 1647|Homo sapiens transcriptional activator
protein.
Length = 1647
Score = 41.1 bits (92), Expect = 0.004
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = +1
Query: 628 NGEMRDYQVRGLNWMISLYENGING 702
NG ++ YQ++GL W++SLY N +NG
Sbjct: 751 NGVLKQYQIKGLEWLVSLYNNNLNG 775
>D26156-1|BAA05143.1| 1647|Homo sapiens transcriptional activator
hSNF2b protein.
Length = 1647
Score = 41.1 bits (92), Expect = 0.004
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = +1
Query: 628 NGEMRDYQVRGLNWMISLYENGING 702
NG ++ YQ++GL W++SLY N +NG
Sbjct: 751 NGVLKQYQIKGLEWLVSLYNNNLNG 775
>BC150298-1|AAI50299.1| 1647|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1647
Score = 41.1 bits (92), Expect = 0.004
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = +1
Query: 628 NGEMRDYQVRGLNWMISLYENGING 702
NG ++ YQ++GL W++SLY N +NG
Sbjct: 751 NGVLKQYQIKGLEWLVSLYNNNLNG 775
>AF254822-2|AAG24789.1| 1647|Homo sapiens SMARCA4 isoform 1 protein.
Length = 1647
Score = 41.1 bits (92), Expect = 0.004
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = +1
Query: 628 NGEMRDYQVRGLNWMISLYENGING 702
NG ++ YQ++GL W++SLY N +NG
Sbjct: 751 NGVLKQYQIKGLEWLVSLYNNNLNG 775
>AF254822-1|AAG24790.1| 1679|Homo sapiens SMARCA4 isoform 2 protein.
Length = 1679
Score = 41.1 bits (92), Expect = 0.004
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = +1
Query: 628 NGEMRDYQVRGLNWMISLYENGING 702
NG ++ YQ++GL W++SLY N +NG
Sbjct: 751 NGVLKQYQIKGLEWLVSLYNNNLNG 775
>AB209313-1|BAD92550.1| 1164|Homo sapiens SWI/SNF-related
matrix-associated actin-dependent regulator of chromatin
a4 var protein.
Length = 1164
Score = 41.1 bits (92), Expect = 0.004
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = +1
Query: 628 NGEMRDYQVRGLNWMISLYENGING 702
NG ++ YQ++GL W++SLY N +NG
Sbjct: 708 NGVLKQYQIKGLEWLVSLYNNNLNG 732
>BX538033-1|CAD97978.1| 822|Homo sapiens hypothetical protein
protein.
Length = 822
Score = 39.9 bits (89), Expect = 0.009
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +1
Query: 613 PHYIKNGEMRDYQVRGLNWMISLYENGING 702
P + G MR YQV G+ W+ L+ENGING
Sbjct: 199 PKHFTGGVMRWYQVEGMEWLRMLWENGING 228
>AL138759-1|CAD13191.1| 838|Homo sapiens helicase,
lymphoid-specific protein.
Length = 838
Score = 39.9 bits (89), Expect = 0.009
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +1
Query: 613 PHYIKNGEMRDYQVRGLNWMISLYENGING 702
P + G MR YQV G+ W+ L+ENGING
Sbjct: 215 PKHFTGGVMRWYQVEGMEWLRMLWENGING 244
>AF155827-1|AAF82262.1| 838|Homo sapiens proliferation-associated
SNF2-like protein protein.
Length = 838
Score = 39.9 bits (89), Expect = 0.009
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +1
Query: 613 PHYIKNGEMRDYQVRGLNWMISLYENGING 702
P + G MR YQV G+ W+ L+ENGING
Sbjct: 215 PKHFTGGVMRWYQVEGMEWLRMLWENGING 244
>AB113249-1|BAD24805.1| 782|Homo sapiens lymphoid specific helicase
variant10 protein.
Length = 782
Score = 39.9 bits (89), Expect = 0.009
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +1
Query: 613 PHYIKNGEMRDYQVRGLNWMISLYENGING 702
P + G MR YQV G+ W+ L+ENGING
Sbjct: 215 PKHFTGGVMRWYQVEGMEWLRMLWENGING 244
>AB113248-1|BAD24804.1| 809|Homo sapiens lymphoid specific helicase
variant9 protein.
Length = 809
Score = 39.9 bits (89), Expect = 0.009
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +1
Query: 613 PHYIKNGEMRDYQVRGLNWMISLYENGING 702
P + G MR YQV G+ W+ L+ENGING
Sbjct: 215 PKHFTGGVMRWYQVEGMEWLRMLWENGING 244
>AB102723-1|BAD10851.1| 884|Homo sapiens lymphoid specific helicase
variant8 protein.
Length = 884
Score = 39.9 bits (89), Expect = 0.009
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +1
Query: 613 PHYIKNGEMRDYQVRGLNWMISLYENGING 702
P + G MR YQV G+ W+ L+ENGING
Sbjct: 215 PKHFTGGVMRWYQVEGMEWLRMLWENGING 244
>AB102722-1|BAD10850.1| 315|Homo sapiens lymphoid specific helicase
variant7 protein.
Length = 315
Score = 39.9 bits (89), Expect = 0.009
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +1
Query: 613 PHYIKNGEMRDYQVRGLNWMISLYENGING 702
P + G MR YQV G+ W+ L+ENGING
Sbjct: 215 PKHFTGGVMRWYQVEGMEWLRMLWENGING 244
>AB102721-1|BAD10849.1| 740|Homo sapiens lymphoid specific helicase
variant6 protein.
Length = 740
Score = 39.9 bits (89), Expect = 0.009
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +1
Query: 613 PHYIKNGEMRDYQVRGLNWMISLYENGING 702
P + G MR YQV G+ W+ L+ENGING
Sbjct: 215 PKHFTGGVMRWYQVEGMEWLRMLWENGING 244
>AB102720-1|BAD10848.1| 345|Homo sapiens lymphoid specific helicase
variant5 protein.
Length = 345
Score = 39.9 bits (89), Expect = 0.009
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +1
Query: 613 PHYIKNGEMRDYQVRGLNWMISLYENGING 702
P + G MR YQV G+ W+ L+ENGING
Sbjct: 215 PKHFTGGVMRWYQVEGMEWLRMLWENGING 244
>AB102719-1|BAD10847.1| 708|Homo sapiens lymphoid specific helicase
variant4 protein.
Length = 708
Score = 39.9 bits (89), Expect = 0.009
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +1
Query: 613 PHYIKNGEMRDYQVRGLNWMISLYENGING 702
P + G MR YQV G+ W+ L+ENGING
Sbjct: 215 PKHFTGGVMRWYQVEGMEWLRMLWENGING 244
>AB102718-1|BAD10846.1| 806|Homo sapiens lymphoid specific helicase
variant3 protein.
Length = 806
Score = 39.9 bits (89), Expect = 0.009
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +1
Query: 613 PHYIKNGEMRDYQVRGLNWMISLYENGING 702
P + G MR YQV G+ W+ L+ENGING
Sbjct: 215 PKHFTGGVMRWYQVEGMEWLRMLWENGING 244
>AK128030-1|BAC87237.1| 2427|Homo sapiens protein ( Homo sapiens
cDNA FLJ46149 fis, clone TESTI4000621, moderately
similar to Homo sapiens Snf2-related CBP activator
protein (SRCAP). ).
Length = 2427
Score = 35.1 bits (77), Expect = 0.25
Identities = 11/24 (45%), Positives = 20/24 (83%)
Frame = +1
Query: 631 GEMRDYQVRGLNWMISLYENGING 702
G++R+YQ GL+W++++YE +NG
Sbjct: 616 GQLREYQHIGLDWLVTMYEKKLNG 639
>AF143946-1|AAD39760.1| 2971|Homo sapiens transcriptional activator
SRCAP protein.
Length = 2971
Score = 35.1 bits (77), Expect = 0.25
Identities = 11/24 (45%), Positives = 20/24 (83%)
Frame = +1
Query: 631 GEMRDYQVRGLNWMISLYENGING 702
G++R+YQ GL+W++++YE +NG
Sbjct: 419 GQLREYQHIGLDWLVTMYEKKLNG 442
>AB002307-1|BAA20768.2| 3053|Homo sapiens KIAA0309 protein.
Length = 3053
Score = 35.1 bits (77), Expect = 0.25
Identities = 11/24 (45%), Positives = 20/24 (83%)
Frame = +1
Query: 631 GEMRDYQVRGLNWMISLYENGING 702
G++R+YQ GL+W++++YE +NG
Sbjct: 597 GQLREYQHIGLDWLVTMYEKKLNG 620
>BC150291-1|AAI50292.1| 1731|Homo sapiens Unknown (protein for
IMAGE:8860133) protein.
Length = 1731
Score = 33.5 bits (73), Expect = 0.77
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 631 GEMRDYQVRGLNWMISLYENGING 702
G +RDYQ GL+W+ LY +NG
Sbjct: 1053 GALRDYQKIGLDWLAKLYRKNLNG 1076
>AY044869-1|AAK97789.1| 3124|Homo sapiens p400 SWI2/SNF2-related
protein protein.
Length = 3124
Score = 33.5 bits (73), Expect = 0.77
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 631 GEMRDYQVRGLNWMISLYENGING 702
G +RDYQ GL+W+ LY +NG
Sbjct: 1053 GALRDYQKIGLDWLAKLYRKNLNG 1076
>AB040931-1|BAA96022.1| 1731|Homo sapiens KIAA1498 protein protein.
Length = 1731
Score = 33.5 bits (73), Expect = 0.77
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 631 GEMRDYQVRGLNWMISLYENGING 702
G +RDYQ GL+W+ LY +NG
Sbjct: 1054 GALRDYQKIGLDWLAKLYRKNLNG 1077
>AK000368-1|BAA91116.1| 251|Homo sapiens protein ( Homo sapiens
cDNA FLJ20361 fis, clone HEP16789. ).
Length = 251
Score = 32.3 bits (70), Expect = 1.8
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +1
Query: 604 EASPHYIKNGEMRDYQVRGLNWMISLYEN 690
E+S Y N ++R+YQ+ G+NW++ + N
Sbjct: 70 ESSREYKNNNKLREYQLEGVNWLLFNWYN 98
>AB037837-1|BAA92654.1| 1967|Homo sapiens KIAA1416 protein protein.
Length = 1967
Score = 32.3 bits (70), Expect = 1.8
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +1
Query: 604 EASPHYIKNGEMRDYQVRGLNWMISLYEN 690
E+S Y N ++R+YQ+ G+NW++ + N
Sbjct: 195 ESSREYKNNNKLREYQLEGVNWLLFNWYN 223
>X91103-1|CAA62558.1| 338|Homo sapiens hr44 protein.
Length = 338
Score = 31.5 bits (68), Expect = 3.1
Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = +1
Query: 481 KIKIDTEPEGPGDHRHRKTXXXXXXXXXXXTNSKQKTIFRFEASPHYI-KNG-EMRDYQV 654
K+ DT P GP D +T +K ++ ++ H++ +NG ++ DY V
Sbjct: 63 KLDHDTAPVGPNDPHEPETPINPNDPNGPKWPAKDSYTKQYTSTVHFVDENGNKLHDYNV 122
Query: 655 RGLNWMISLYENGING 702
+ NW +L + G
Sbjct: 123 QTSNWTRTLIVDKATG 138
>AY034072-1|AAK56405.1| 2713|Homo sapiens chromodomain helicase DNA
binding protein 5 protein.
Length = 2713
Score = 31.5 bits (68), Expect = 3.1
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +1
Query: 598 RFEASPHYIKNGEMRDYQVRGLNWMISLYENGIN 699
+ E S Y + ++R+YQ+ G+NW++ + N N
Sbjct: 446 KLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKN 479
>AL121674-2|CAI21744.1| 2715|Homo sapiens chromodomain helicase DNA
binding protein 6 protein.
Length = 2715
Score = 31.5 bits (68), Expect = 3.1
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +1
Query: 598 RFEASPHYIKNGEMRDYQVRGLNWMISLYENGIN 699
+ E S Y + ++R+YQ+ G+NW++ + N N
Sbjct: 448 KLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKN 481
>AL031669-3|CAI22255.1| 2715|Homo sapiens chromodomain helicase DNA
binding protein 6 protein.
Length = 2715
Score = 31.5 bits (68), Expect = 3.1
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +1
Query: 598 RFEASPHYIKNGEMRDYQVRGLNWMISLYENGIN 699
+ E S Y + ++R+YQ+ G+NW++ + N N
Sbjct: 448 KLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKN 481
>AL031667-8|CAI42983.1| 524|Homo sapiens chromodomain helicase DNA
binding protein 6 protein.
Length = 524
Score = 31.5 bits (68), Expect = 3.1
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +1
Query: 598 RFEASPHYIKNGEMRDYQVRGLNWMISLYENGIN 699
+ E S Y + ++R+YQ+ G+NW++ + N N
Sbjct: 150 KLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKN 183
>AL031667-2|CAI42977.1| 2715|Homo sapiens chromodomain helicase DNA
binding protein 6 protein.
Length = 2715
Score = 31.5 bits (68), Expect = 3.1
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +1
Query: 598 RFEASPHYIKNGEMRDYQVRGLNWMISLYENGIN 699
+ E S Y + ++R+YQ+ G+NW++ + N N
Sbjct: 448 KLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKN 481
>AF525085-1|AAN59903.1| 488|Homo sapiens RIGB protein.
Length = 488
Score = 31.5 bits (68), Expect = 3.1
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +1
Query: 598 RFEASPHYIKNGEMRDYQVRGLNWMISLYENGIN 699
+ E S Y + ++R+YQ+ G+NW++ + N N
Sbjct: 114 KLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKN 147
>BT007050-1|AAP35699.1| 501|Homo sapiens chromodomain helicase DNA
binding protein 2 protein.
Length = 501
Score = 30.7 bits (66), Expect = 5.4
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
Frame = +1
Query: 580 KQKTIF-RFEASPHYI--KNGEMRDYQVRGLNWM 672
KQ+ F + P Y+ +N E+RDYQ+ GLNW+
Sbjct: 462 KQRPRFVALKKQPAYLGGENLELRDYQLEGLNWL 495
>BC020810-1|AAH20810.1| 501|Homo sapiens chromodomain helicase DNA
binding protein 2 protein.
Length = 501
Score = 30.7 bits (66), Expect = 5.4
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
Frame = +1
Query: 580 KQKTIF-RFEASPHYI--KNGEMRDYQVRGLNWM 672
KQ+ F + P Y+ +N E+RDYQ+ GLNW+
Sbjct: 462 KQRPRFVALKKQPAYLGGENLELRDYQLEGLNWL 495
>BC007347-1|AAH07347.1| 501|Homo sapiens chromodomain helicase DNA
binding protein 2 protein.
Length = 501
Score = 30.7 bits (66), Expect = 5.4
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
Frame = +1
Query: 580 KQKTIF-RFEASPHYI--KNGEMRDYQVRGLNWM 672
KQ+ F + P Y+ +N E+RDYQ+ GLNW+
Sbjct: 462 KQRPRFVALKKQPAYLGGENLELRDYQLEGLNWL 495
>AF006514-1|AAB87382.1| 1739|Homo sapiens CHD2 protein.
Length = 1739
Score = 30.7 bits (66), Expect = 5.4
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
Frame = +1
Query: 580 KQKTIF-RFEASPHYI--KNGEMRDYQVRGLNWM 672
KQ+ F + P Y+ +N E+RDYQ+ GLNW+
Sbjct: 462 KQRPRFVALKKQPAYLGGENLELRDYQLEGLNWL 495
>AB046784-1|BAB13390.3| 2432|Homo sapiens KIAA1564 protein protein.
Length = 2432
Score = 30.7 bits (66), Expect = 5.4
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +1
Query: 598 RFEASPHYIKNGEMRDYQVRGLNWMISLYENGIN 699
+ E S Y ++R+YQ+ G+NW++ + N N
Sbjct: 649 KLELSHEYKNRNQLREYQLEGVNWLLFNWYNRQN 682
>U91543-1|AAC39923.1| 2000|Homo sapiens zinc-finger helicase
protein.
Length = 2000
Score = 30.3 bits (65), Expect = 7.2
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +1
Query: 472 RPRKIKIDTEPEGPGDHRHRKTXXXXXXXXXXXTNSKQKTIFRFEASPHYIK--NGEMRD 645
R R++ + +P P ++ +K TN T+ ++E P +I G +
Sbjct: 682 RHRELIMGEDPAQPRKYKKKKKELQGDGPPSSPTNDP--TV-KYETQPRFITATGGTLHM 738
Query: 646 YQVRGLNWM 672
YQ+ GLNW+
Sbjct: 739 YQLEGLNWL 747
>DQ333316-1|ABD24032.1| 2881|Homo sapiens PRIC320 isoform 1 protein.
Length = 2881
Score = 30.3 bits (65), Expect = 7.2
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +1
Query: 598 RFEASPHYIKNGEMRDYQVRGLNWMISLYENGIN 699
+ + S Y ++R+YQ+ GLNW++ + N N
Sbjct: 847 KIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRN 880
>AY647157-1|AAT66509.1| 2881|Homo sapiens KISH2 protein.
Length = 2881
Score = 30.3 bits (65), Expect = 7.2
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +1
Query: 598 RFEASPHYIKNGEMRDYQVRGLNWMISLYENGIN 699
+ + S Y ++R+YQ+ GLNW++ + N N
Sbjct: 847 KIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRN 880
>AY243500-1|AAQ24287.1| 2897|Homo sapiens chromatin remodeling
factor CHROM1 protein.
Length = 2897
Score = 30.3 bits (65), Expect = 7.2
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +1
Query: 598 RFEASPHYIKNGEMRDYQVRGLNWMISLYENGIN 699
+ + S Y ++R+YQ+ GLNW++ + N N
Sbjct: 847 KIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRN 880
>AF006515-1|AAB87383.1| 1944|Homo sapiens CHD3 protein.
Length = 1944
Score = 30.3 bits (65), Expect = 7.2
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +1
Query: 472 RPRKIKIDTEPEGPGDHRHRKTXXXXXXXXXXXTNSKQKTIFRFEASPHYIK--NGEMRD 645
R R++ + +P P ++ +K TN T+ ++E P +I G +
Sbjct: 682 RHRELIMGEDPAQPRKYKKKKKELQGDGPPSSPTNDP--TV-KYETQPRFITATGGTLHM 738
Query: 646 YQVRGLNWM 672
YQ+ GLNW+
Sbjct: 739 YQLEGLNWL 747
>AB002306-1|BAA20767.3| 2759|Homo sapiens KIAA0308 protein.
Length = 2759
Score = 30.3 bits (65), Expect = 7.2
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +1
Query: 598 RFEASPHYIKNGEMRDYQVRGLNWMISLYENGIN 699
+ + S Y ++R+YQ+ GLNW++ + N N
Sbjct: 724 KIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRN 757
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,081,471
Number of Sequences: 237096
Number of extensions: 2226258
Number of successful extensions: 9336
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 9144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9322
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8399192100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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