Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8l12
(718 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 25 0.71
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 25 0.71
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 25 0.71
L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein pro... 23 2.2
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 23 3.8
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 23 3.8
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 23 3.8
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 22 6.7
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 22 6.7
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 22 6.7
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 22 6.7
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 22 6.7
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 22 6.7
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 22 6.7
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 22 6.7
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 22 6.7
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 25.0 bits (52), Expect = 0.71
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -2
Query: 291 IVANIGNVHGIIRLGHF 241
I+A G+VHG+I GH+
Sbjct: 104 IIAYTGDVHGVIGAGHW 120
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 25.0 bits (52), Expect = 0.71
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +3
Query: 51 FNCEQYLNNSVNRYTLYYKILHAVNL*L*VVQPVY 155
+N + Y NN+ N LYY I++ + + V P+Y
Sbjct: 309 YNYKNY-NNNYNSKKLYYNIINIEQIPVPVPVPIY 342
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 25.0 bits (52), Expect = 0.71
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +3
Query: 51 FNCEQYLNNSVNRYTLYYKILHAVNL*L*VVQPVY 155
+N + Y NN+ N LYY I++ + + V P+Y
Sbjct: 320 YNYKNY-NNNYNSKKLYYNIINIEQIPVPVPVPIY 353
>L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein
protein.
Length = 69
Score = 23.4 bits (48), Expect = 2.2
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -1
Query: 319 MSCHLKSHWNCRQYR 275
++ HLKSH N QYR
Sbjct: 32 LNSHLKSHSNVYQYR 46
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 22.6 bits (46), Expect = 3.8
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +3
Query: 48 IFNCEQYLNNSVNRYTLYYKILHAVNL*L*VVQPVY 155
I N Y NN+ LYY I + + + V P+Y
Sbjct: 90 ISNISNYNNNNNYNKKLYYNINYIEQIPVPVPVPIY 125
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 22.6 bits (46), Expect = 3.8
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +3
Query: 54 NCEQYLNNSVNR-YTLYYKILHAVNL*L*VVQPVY 155
N Y NN+ N LYY I++ + + V P+Y
Sbjct: 337 NYNNYNNNNYNNYKKLYYNIINIEQIPVPVPVPIY 371
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 22.6 bits (46), Expect = 3.8
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +3
Query: 48 IFNCEQYLNNSVNRYTLYYKILHAVNL*L*VVQPVY 155
I N Y NN+ LYY I + + + V P+Y
Sbjct: 328 ISNISNYNNNNNYNKKLYYNINYIEQIPVPVPVPIY 363
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 21.8 bits (44), Expect = 6.7
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = -3
Query: 254 DWAIFIYS*NNIELDDQDCEVRKYIQ 177
D+ IF+ N+I ++D D V +++
Sbjct: 14 DFNIFVADINSINVEDMDFRVDMFVR 39
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 6.7
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 36 VITLIFNCEQYLNNSVNRYTLYYKILHAVNL*L*VVQPVY 155
+I+ + N Y N + N LYY I + + + V PVY
Sbjct: 81 IISSLSNNYNYNNYNNNYKPLYYNINYIEQIPVPVPFPVY 120
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 6.7
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 36 VITLIFNCEQYLNNSVNRYTLYYKILHAVNL*L*VVQPVY 155
+I+ + N Y N + N LYY I + + + V PVY
Sbjct: 81 IISSLSNNYNYNNYNNNYKPLYYNINYIEQIPVPVPFPVY 120
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 6.7
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 36 VITLIFNCEQYLNNSVNRYTLYYKILHAVNL*L*VVQPVY 155
+I+ + N Y N + N LYY I + + + V PVY
Sbjct: 81 IISSLSNNYNYNNYNNNYKPLYYNINYIEQIPVPVPFPVY 120
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 6.7
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 36 VITLIFNCEQYLNNSVNRYTLYYKILHAVNL*L*VVQPVY 155
+I+ + N Y N + N LYY I + + + V PVY
Sbjct: 81 IISSLSNNYNYNNYNNNYKPLYYNINYIEQIPVPVPFPVY 120
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 6.7
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 36 VITLIFNCEQYLNNSVNRYTLYYKILHAVNL*L*VVQPVY 155
+I+ + N Y N + N LYY I + + + V PVY
Sbjct: 314 IISSLSNNYNYNNYNNNYKPLYYNINYIEQIPVPVPFPVY 353
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 6.7
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 36 VITLIFNCEQYLNNSVNRYTLYYKILHAVNL*L*VVQPVY 155
+I+ + N Y N + N LYY I + + + V PVY
Sbjct: 314 IISSLSNNYNYNNYNNNYKPLYYNINYIEQIPVPVPFPVY 353
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 6.7
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 36 VITLIFNCEQYLNNSVNRYTLYYKILHAVNL*L*VVQPVY 155
+I+ + N Y N + N LYY I + + + V PVY
Sbjct: 314 IISSLSNNYNYNNYNNNYKPLYYNINYIEQIPVPVPFPVY 353
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.8 bits (44), Expect = 6.7
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 36 VITLIFNCEQYLNNSVNRYTLYYKILHAVNL*L*VVQPVY 155
+I+ + N Y N + N LYY I + + + V PVY
Sbjct: 303 IISSLSNNYNYNNYNNNYKPLYYNINYIEQIPVPVPFPVY 342
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,549
Number of Sequences: 438
Number of extensions: 4181
Number of successful extensions: 23
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22170330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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