Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8l11
         (694 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.59 
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       21   7.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.2  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    21   7.2  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   7.2  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   9.6  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   9.6  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   9.6  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.0 bits (52), Expect = 0.59
 Identities = 11/47 (23%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
 Frame = -3

Query: 632 FCITYVTITVHFIFLIRSQWIY---LVCTRVRHFRHIKLFQPFLFLC 501
           FC  ++  T+H +FL+   + Y   ++   + +F    +  P  F C
Sbjct: 268 FCCAFIIFTMHLLFLLCIYYFYCALIILLCIYYFCRAFIIFPTHFYC 314



 Score = 22.2 bits (45), Expect = 4.1
 Identities = 10/37 (27%), Positives = 16/37 (43%), Gaps = 2/37 (5%)
 Frame = -3

Query: 689 HCSCCRYYINICYANFSG--FFCITYVTITVHFIFLI 585
           H   C YY    +       +F   ++  TVH +FL+
Sbjct: 95  HFLLCTYYFYYAFIILLCVYYFYYAFIIFTVHLLFLL 131



 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -3

Query: 635 FFCITYVTITVHFIFLI 585
           F+C  ++  TVH +FL+
Sbjct: 149 FYC-AFIIFTVHLLFLL 164



 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/33 (24%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
 Frame = -3

Query: 677 CRYYINICYANFSG--FFCITYVTITVHFIFLI 585
           C Y+    +  F+    FC  ++   +H +FL+
Sbjct: 165 CIYHFFCAFIIFTMHLLFCCAFIFFNMHLLFLL 197


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +3

Query: 372 FESNVLIKVKELRRIKETKKNERKHR 449
           F++  +   KELR +KE  +  R+ R
Sbjct: 54  FQNRRMKLKKELRAVKEINEQARRER 79


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -3

Query: 365 TIFNVVHNILSSD 327
           T+FNVVH  L+S+
Sbjct: 531 TVFNVVHCYLASE 543


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +3

Query: 372 FESNVLIKVKELRRIKETKKNERKHR 449
           F++  +   KELR +KE  +  R+ R
Sbjct: 205 FQNRRMKLKKELRAVKEINEQARRER 230


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +3

Query: 372 FESNVLIKVKELRRIKETKKNERKHR 449
           F++  +   KELR +KE  +  R+ R
Sbjct: 264 FQNRRMKLKKELRAVKEINEQARRER 289


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 protein.
          Length = 980

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 11/44 (25%), Positives = 20/44 (45%)
 Frame = +3

Query: 495  ALAEEKERLKQLNVSEVSYPSTDEINPLTSDEKNEMNCDSNIGN 626
            A+ +E E  K     +  Y ++      T+ + NE+ CD   G+
Sbjct: 878  AMRQELEGYKVKLEYDGPYETSISSGQYTTKDPNEVTCDEEEGH 921


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +3

Query: 240 FMDGVPVKISEKYKKPPSIELPYTLI 317
           FM  VP K+   YK    +E+ + +I
Sbjct: 62  FMHIVPTKLISFYKSTAILEIAFEVI 87


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 268 RKNTKNLQVLSYRTP**NAQSELKM 342
           R+   N+QVL+Y+       +E+KM
Sbjct: 270 RREIANVQVLAYKIEAKRRDNEIKM 294


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,644
Number of Sequences: 336
Number of extensions: 3028
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)