Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8l11
(694 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z99286-2|CAH60793.1| 310|Caenorhabditis elegans Hypothetical pr... 31 0.59
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr... 27 0.74
Z81557-1|CAB04535.1| 343|Caenorhabditis elegans Hypothetical pr... 31 0.78
Z83228-9|CAB05737.2| 539|Caenorhabditis elegans Hypothetical pr... 29 2.4
U67079-1|AAB40716.1| 539|Caenorhabditis elegans C2-HC type zinc... 29 2.4
Z92789-5|CAB07217.1| 397|Caenorhabditis elegans Hypothetical pr... 29 3.2
AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical... 29 3.2
U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical pr... 28 7.3
AF067948-4|AAO25983.1| 756|Caenorhabditis elegans Egl-27 relate... 27 9.6
AF067948-3|AAO25984.1| 870|Caenorhabditis elegans Egl-27 relate... 27 9.6
AF067948-2|AAD34654.1| 870|Caenorhabditis elegans Egl-27 relate... 27 9.6
AF067948-1|AAD34653.1| 1022|Caenorhabditis elegans Egl-27 relate... 27 9.6
AF043692-2|AAB97531.1| 253|Caenorhabditis elegans Hypothetical ... 27 9.6
>Z99286-2|CAH60793.1| 310|Caenorhabditis elegans Hypothetical
protein Y7A9C.8 protein.
Length = 310
Score = 31.5 bits (68), Expect = 0.59
Identities = 21/61 (34%), Positives = 28/61 (45%)
Frame = -3
Query: 692 THCSCCRYYINICYANFSGFFCITYVTITVHFIFLIRSQWIYLVCTRVRHFRHIKLFQPF 513
TH S Y+ IC A F + T T HFI + + +LV +HI LFQ F
Sbjct: 86 THFSEIAVYLVICLAFFI-ILALYQFTETFHFIIFLLAAQRFLVFYFPSTEKHIALFQKF 144
Query: 512 L 510
+
Sbjct: 145 M 145
>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical protein
F36F2.3a protein.
Length = 1128
Score = 26.6 bits (56), Expect(2) = 0.74
Identities = 15/71 (21%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = +3
Query: 426 KKNERKHRXXXXXXXXXXXXDAIAL-AEEKERLKQLNVSEVSYPSTDEINPLTSDEKNEM 602
+K +KH+ D L E+KE+ K+ + ++ P + D+++++
Sbjct: 794 RKKHKKHKKEKKSKKEKRDEDEDDLDTEKKEKKKERKYQDDKDEDSNRKEPRSLDDEDKV 853
Query: 603 NCDSNIGNTKE 635
D N + KE
Sbjct: 854 ELDKNFADKKE 864
Score = 23.0 bits (47), Expect(2) = 0.74
Identities = 7/17 (41%), Positives = 15/17 (88%)
Frame = +3
Query: 399 KELRRIKETKKNERKHR 449
K++++ K++KKN++ HR
Sbjct: 765 KKMKKHKKSKKNKKHHR 781
>Z81557-1|CAB04535.1| 343|Caenorhabditis elegans Hypothetical
protein F59A1.3 protein.
Length = 343
Score = 31.1 bits (67), Expect = 0.78
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = -3
Query: 668 YINICYANFSGFFCITYVTITVHFIFLIRSQWIYL 564
Y+ +C N S F YVTI + + ++W+ L
Sbjct: 113 YLAVCKPNMSKLFSFPYVTILILIFVFVSAEWLVL 147
>Z83228-9|CAB05737.2| 539|Caenorhabditis elegans Hypothetical
protein F52F12.6 protein.
Length = 539
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/65 (23%), Positives = 31/65 (47%)
Frame = +3
Query: 486 DAIALAEEKERLKQLNVSEVSYPSTDEINPLTSDEKNEMNCDSNIGNTKETAEVSITDIN 665
D + +AEE E + S PS+ + ++E M CD+ N ++ E + T +
Sbjct: 63 DIVRVAEEAEAAA---ATCSSIPSSSDTKENETEEDQNMTCDTTTNNAQKPTEQTATSAD 119
Query: 666 IIPAT 680
++ ++
Sbjct: 120 VVTSS 124
>U67079-1|AAB40716.1| 539|Caenorhabditis elegans C2-HC type zinc
finger proteinC.e-MyT1 protein.
Length = 539
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/65 (23%), Positives = 31/65 (47%)
Frame = +3
Query: 486 DAIALAEEKERLKQLNVSEVSYPSTDEINPLTSDEKNEMNCDSNIGNTKETAEVSITDIN 665
D + +AEE E + S PS+ + ++E M CD+ N ++ E + T +
Sbjct: 63 DIVRVAEEAEAAA---ATCSSIPSSSDTKENETEEDQNMTCDTTTNNAQKPTEQTATSAD 119
Query: 666 IIPAT 680
++ ++
Sbjct: 120 VVTSS 124
>Z92789-5|CAB07217.1| 397|Caenorhabditis elegans Hypothetical
protein H02I12.3 protein.
Length = 397
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +1
Query: 271 KNTKNLQVLSYRTP**NAQSELKMLWTTLNI 363
KN+K SY T N S+LK++WTTL I
Sbjct: 265 KNSKTPASRSYSTRSTNVYSKLKLVWTTLLI 295
>AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical
protein W03F11.4 protein.
Length = 1406
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 324 PIRAQNVVDNVKYCSSFESNVLI 392
P +D +KYC SF++NVL+
Sbjct: 1177 PAEPHTALDIIKYCESFKTNVLV 1199
>U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical
protein ZK354.3 protein.
Length = 312
Score = 27.9 bits (59), Expect = 7.3
Identities = 20/83 (24%), Positives = 30/83 (36%)
Frame = +3
Query: 399 KELRRIKETKKNERKHRXXXXXXXXXXXXDAIALAEEKERLKQLNVSEVSYPSTDEINPL 578
KE + +E KK E K EEK++L E D+ +
Sbjct: 70 KEEEKKEEEKKEEEKKADDEKKKTEEKDDKKSKKTEEKDKLSVKKTQETKSERKDKKDER 129
Query: 579 TSDEKNEMNCDSNIGNTKETAEV 647
D+K E N + + K+ EV
Sbjct: 130 KEDDKKEENKEKSKDEEKKKDEV 152
>AF067948-4|AAO25983.1| 756|Caenorhabditis elegans Egl-27 related
protein 1, isoform c protein.
Length = 756
Score = 27.5 bits (58), Expect = 9.6
Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Frame = +3
Query: 525 QLNVSEVSYPSTDEINPLTS-DEKNEMNCDSNIGNTKETAEVSITDI 662
Q S PS + T+ D+K E N N KETAE T +
Sbjct: 148 QGRTSSTEEPSASDAPAATAKDKKEEKEAKENAKNLKETAEAEATKL 194
>AF067948-3|AAO25984.1| 870|Caenorhabditis elegans Egl-27 related
protein 1, isoform d protein.
Length = 870
Score = 27.5 bits (58), Expect = 9.6
Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Frame = +3
Query: 525 QLNVSEVSYPSTDEINPLTS-DEKNEMNCDSNIGNTKETAEVSITDI 662
Q S PS + T+ D+K E N N KETAE T +
Sbjct: 148 QGRTSSTEEPSASDAPAATAKDKKEEKEAKENAKNLKETAEAEATKL 194
>AF067948-2|AAD34654.1| 870|Caenorhabditis elegans Egl-27 related
protein 1, isoform b protein.
Length = 870
Score = 27.5 bits (58), Expect = 9.6
Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Frame = +3
Query: 525 QLNVSEVSYPSTDEINPLTS-DEKNEMNCDSNIGNTKETAEVSITDI 662
Q S PS + T+ D+K E N N KETAE T +
Sbjct: 148 QGRTSSTEEPSASDAPAATAKDKKEEKEAKENAKNLKETAEAEATKL 194
>AF067948-1|AAD34653.1| 1022|Caenorhabditis elegans Egl-27 related
protein 1, isoform a protein.
Length = 1022
Score = 27.5 bits (58), Expect = 9.6
Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Frame = +3
Query: 525 QLNVSEVSYPSTDEINPLTS-DEKNEMNCDSNIGNTKETAEVSITDI 662
Q S PS + T+ D+K E N N KETAE T +
Sbjct: 148 QGRTSSTEEPSASDAPAATAKDKKEEKEAKENAKNLKETAEAEATKL 194
>AF043692-2|AAB97531.1| 253|Caenorhabditis elegans Hypothetical
protein C17F3.3 protein.
Length = 253
Score = 27.5 bits (58), Expect = 9.6
Identities = 28/126 (22%), Positives = 49/126 (38%), Gaps = 1/126 (0%)
Frame = +3
Query: 273 KYKKPPSIELPYTLIECPIR-AQNVVDNVKYCSSFESNVLIKVKELRRIKETKKNERKHR 449
K KK + P ++ + P++ A + + + + + V KV+E KE KK E K
Sbjct: 24 KGKKKNTSAAPVSIRKPPMKPACSTIQPTDFPPASAAPVAPKVEEK---KEEKKEEEKKA 80
Query: 450 XXXXXXXXXXXXDAIALAEEKERLKQLNVSEVSYPSTDEINPLTSDEKNEMNCDSNIGNT 629
EEK+++ E D+ + DEK E + + +
Sbjct: 81 DDEKKKTEEKDDKKSKKTEEKDKISVKKTQETKSERKDKKDEKKEDEKKEESKEKSKDEE 140
Query: 630 KETAEV 647
K+ EV
Sbjct: 141 KKKDEV 146
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,788,282
Number of Sequences: 27780
Number of extensions: 270041
Number of successful extensions: 825
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 825
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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