Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8l10
(411 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_3897| Best HMM Match : DUF1662 (HMM E-Value=4.4) 32 0.21
SB_51613| Best HMM Match : DUF1662 (HMM E-Value=4.4) 29 2.0
SB_25084| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.0
SB_23572| Best HMM Match : 7tm_1 (HMM E-Value=6.4e-22) 28 2.6
SB_6552| Best HMM Match : Glyco_transf_9 (HMM E-Value=1.9) 28 2.6
SB_1234| Best HMM Match : RVT_1 (HMM E-Value=3.1e-08) 28 2.6
SB_57685| Best HMM Match : Pkinase_Tyr (HMM E-Value=7.9) 28 3.4
SB_19325| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.4
SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.4
SB_14213| Best HMM Match : RVT_1 (HMM E-Value=1.4e-24) 27 4.5
SB_41594| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.0
SB_41225| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
SB_36751| Best HMM Match : Exo_endo_phos (HMM E-Value=2e-12) 27 7.9
SB_31184| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
SB_32094| Best HMM Match : RVT_1 (HMM E-Value=1.9e-12) 27 7.9
SB_26778| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
>SB_3897| Best HMM Match : DUF1662 (HMM E-Value=4.4)
Length = 300
Score = 31.9 bits (69), Expect = 0.21
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Frame = +1
Query: 64 KVKFPYAALSYINVTLCTYTAMLVGYMATFNEFEYLQYW-----FLLSFLMSVALNAPTL 228
+V +PY+ L ++++L T L A EY +YW F + +SV L A
Sbjct: 204 RVLYPYSGLCKLDLSLAEVTRRLPSIKAVLQVPEYSEYWRTAECFAIRKGISVVLQASKE 263
Query: 229 WT 234
WT
Sbjct: 264 WT 265
>SB_51613| Best HMM Match : DUF1662 (HMM E-Value=4.4)
Length = 246
Score = 28.7 bits (61), Expect = 2.0
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +1
Query: 64 KVKFPYAALSYINVTLCTYTAMLVGYMATFNEFEYLQYW 180
+V +PY+ L ++++L T L A EY +YW
Sbjct: 204 RVLYPYSGLCKLDLSLAEVTRRLPSIKAVLQVPEYSEYW 242
>SB_25084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 523
Score = 28.7 bits (61), Expect = 2.0
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -2
Query: 254 ASVVLNA-VHKVGAFSATDIKNDNRNQYCKYSNSLNVAMYPTN 129
A +V+N +HK G S I+ D KY +VA+YPTN
Sbjct: 306 APIVINRELHKGGDRSCMHIELDITGSGIKYDAGDHVAVYPTN 348
>SB_23572| Best HMM Match : 7tm_1 (HMM E-Value=6.4e-22)
Length = 269
Score = 28.3 bits (60), Expect = 2.6
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = +1
Query: 139 YMATFNEFEYLQYWFLLSFLMSVALNAPTLWTAFKTTEAHEV 264
Y F L LS ++SVA N LWT F T H V
Sbjct: 9 YQENLESFILLSVLSTLSGIVSVAGNFLVLWTIFHTKSLHVV 50
>SB_6552| Best HMM Match : Glyco_transf_9 (HMM E-Value=1.9)
Length = 930
Score = 28.3 bits (60), Expect = 2.6
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +2
Query: 152 STNLNIYNTGFCCR 193
S NLN Y+TG CCR
Sbjct: 373 SLNLNCYSTGICCR 386
>SB_1234| Best HMM Match : RVT_1 (HMM E-Value=3.1e-08)
Length = 210
Score = 28.3 bits (60), Expect = 2.6
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +1
Query: 178 WFLLSFLMSVALNAPTLWTAFKTTEAHEVVYEMKLFQAMYFSNVLLNY 321
W + F+ + N+P LW T EVV + +L A N ++ +
Sbjct: 127 WLFVLFINDLECNSPHLWKYVDDTTVSEVVLKGELSSAQGLVNDIIEW 174
>SB_57685| Best HMM Match : Pkinase_Tyr (HMM E-Value=7.9)
Length = 104
Score = 27.9 bits (59), Expect = 3.4
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = -1
Query: 363 KNKICTHLIVRKHHIIQQHVTKVHGLEQLHFVNYFMGFCGFER 235
+ +IC H +++ H+I+ + +V +Q F+ Y G F+R
Sbjct: 60 RKEICIHRMLQDVHVIKFYAQRVENSKQYLFLEYSSGGELFDR 102
>SB_19325| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 356
Score = 27.9 bits (59), Expect = 3.4
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = -1
Query: 363 KNKICTHLIVRKHHIIQQHVTKVHGLEQLHFVNYFMGFCGFER 235
+ +IC H +++ H+I+ + +V +Q F+ Y G F+R
Sbjct: 60 RKEICIHRMLQDVHVIKFYAQRVENSKQYLFLEYSSGGELFDR 102
>SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3261
Score = 27.9 bits (59), Expect = 3.4
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 52 STDTKVKFPYAALSYINVTLCTYTAML 132
STD +V F + +L N+T TY A+L
Sbjct: 2250 STDARVDFKFNSLRPSNITTSTYAALL 2276
>SB_14213| Best HMM Match : RVT_1 (HMM E-Value=1.4e-24)
Length = 811
Score = 27.5 bits (58), Expect = 4.5
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = -1
Query: 363 KNKICTHLIVRKHHIIQQHVTKVHGLEQLHFVNY 262
++K+ T R +I ++ + VHGLE+LH+ Y
Sbjct: 296 RSKLLTETERRYSNIEREMLAVVHGLEKLHYYAY 329
>SB_41594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 284
Score = 27.1 bits (57), Expect = 6.0
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +2
Query: 320 MWCFRTIKWVQILFLLTI*FTVVYFL 397
+W R KW+ ++ +L +TVV+ L
Sbjct: 12 LWTIRNTKWLSVVVVLIAVYTVVFVL 37
>SB_41225| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 42
Score = 26.6 bits (56), Expect = 7.9
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = -1
Query: 354 ICTHLIVRKHHIIQQHVTKVHGLEQLHFVNYFMGFCGFER 235
IC H +++ H+I+ + +V +Q F+ Y G F+R
Sbjct: 1 ICIHRMLQDVHVIKFYAQRVENSKQYLFLEYASGGELFDR 40
>SB_36751| Best HMM Match : Exo_endo_phos (HMM E-Value=2e-12)
Length = 906
Score = 26.6 bits (56), Expect = 7.9
Identities = 16/65 (24%), Positives = 31/65 (47%)
Frame = +1
Query: 166 YLQYWFLLSFLMSVALNAPTLWTAFKTTEAHEVVYEMKLFQAMYFSNVLLNYVVFSDNQM 345
+ WF +L V L+ + + F T+ HE + + + + S V+L+ VV + +
Sbjct: 729 FCHQWFCHGWLSPVVLSRVVVTSGFVTSGCHEWL-SLVVLSPVVLSPVVLSRVVVTSGFV 787
Query: 346 GTNFV 360
+ FV
Sbjct: 788 TSGFV 792
>SB_31184| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 724
Score = 26.6 bits (56), Expect = 7.9
Identities = 12/48 (25%), Positives = 21/48 (43%)
Frame = +1
Query: 178 WFLLSFLMSVALNAPTLWTAFKTTEAHEVVYEMKLFQAMYFSNVLLNY 321
W + F+ + N+P LW T EVV + + A N ++ +
Sbjct: 465 WLFVLFINDLECNSPHLWKYVDDTTVSEVVLKGEFSSAQGLVNDIIEW 512
>SB_32094| Best HMM Match : RVT_1 (HMM E-Value=1.9e-12)
Length = 642
Score = 26.6 bits (56), Expect = 7.9
Identities = 12/48 (25%), Positives = 21/48 (43%)
Frame = +1
Query: 178 WFLLSFLMSVALNAPTLWTAFKTTEAHEVVYEMKLFQAMYFSNVLLNY 321
W + F+ + N+P LW T EVV + + A N ++ +
Sbjct: 383 WLFVLFINDLECNSPHLWKYVDDTTVSEVVLKGEFSSAQGLVNDIIEW 430
>SB_26778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1050
Score = 26.6 bits (56), Expect = 7.9
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -2
Query: 194 NDNRNQYCKYSNSLNVAMYPT 132
NDN N YC N+LN + Y T
Sbjct: 240 NDNCNTYCISQNNLNGSYYAT 260
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,634,425
Number of Sequences: 59808
Number of extensions: 273884
Number of successful extensions: 692
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 691
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 752487277
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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