Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8l09
         (731 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0700 + 20797600-20798064                                         30   2.2  
11_06_0013 - 19252779-19252805,19252947-19253090,19253572-192536...    29   2.9  
06_01_0441 + 3130906-3131424,3131847-3132269                           28   8.8  
05_03_0377 + 13271936-13272062,13272547-13272641,13273861-132739...    28   8.8  

>07_03_0700 + 20797600-20798064
          Length = 154

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +1

Query: 274 IALYCLEIILTSFLIYGAHKRIISYMKWFY 363
           +A  C  I+ TSFLIYG+ K I    +W+Y
Sbjct: 1   MAFLC-SIVATSFLIYGSAKEIPRGHRWWY 29


>11_06_0013 -
           19252779-19252805,19252947-19253090,19253572-19253663,
           19253757-19253835,19253965-19254031,19254163-19254254,
           19254986-19255102,19255254-19255365,19255479-19255594,
           19255680-19255756,19255912-19255993,19256077-19256214,
           19258806-19259009
          Length = 448

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = +1

Query: 190 LHSYGVHYQKNVFSV-YHGITTGVPTELSIALYCL 291
           LH +G+H  K+++S+ Y  +TTG      +A+Y L
Sbjct: 358 LHLFGLHMNKSLYSLSYTCVTTGTAGLFFVAIYLL 392


>06_01_0441 + 3130906-3131424,3131847-3132269
          Length = 313

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
 Frame = +1

Query: 70  TVTMYCDLPE-FGRCCFCMPLRKGVLVFGYINLFFSAFLVGLHSYGVHYQKNV 225
           T+ ++   PE  G  C C  L    L +GY  +F+      LH++G+H   N+
Sbjct: 249 TMVIFVLPPESLGEICTCARLAVAFLFYGYWLMFYR-----LHAHGIHLVLNL 296


>05_03_0377 +
           13271936-13272062,13272547-13272641,13273861-13273918,
           13274079-13274273,13274647-13274723,13275015-13275097,
           13275748-13275799,13275912-13275980,13276215-13276301,
           13276401-13276462,13276758-13276900,13277045-13277088
          Length = 363

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
 Frame = +1

Query: 256 VPTELSIALYCL-EIILTSFLIYGAHKRIISYMKWFYYFT---VTTTVAAILIQILEFTS 423
           VPT  S+  Y L  ++  S L+Y   +R    MKW+YY     V      ++++  ++TS
Sbjct: 46  VPTSQSLLNYVLLGVVYGSILLY---RRKSLQMKWYYYLVLALVDVEANYLVVKAYQYTS 102

Query: 424 YRS 432
             S
Sbjct: 103 LTS 105


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,380,537
Number of Sequences: 37544
Number of extensions: 339263
Number of successful extensions: 745
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 745
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1921741964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)