Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8l09
(731 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U03644-1|AAA17853.1| 451|Homo sapiens recepin protein. 33 1.4
BC046098-1|AAH46098.1| 450|Homo sapiens CBF1 interacting corepr... 33 1.4
BC038987-1|AAH38987.1| 289|Homo sapiens Similar to RIKEN cDNA 1... 33 1.4
BC031018-1|AAH31018.1| 426|Homo sapiens CIR protein protein. 33 1.4
BC021175-1|AAH21175.1| 227|Homo sapiens CIR protein protein. 33 1.4
BC015040-1|AAH15040.1| 202|Homo sapiens CIR protein protein. 33 1.4
AC018470-1|AAY24216.1| 450|Homo sapiens unknown protein. 33 1.4
D14696-1|BAA03522.2| 254|Homo sapiens KIAA0108 protein. 32 1.8
CR456758-1|CAG33039.1| 233|Homo sapiens LAPTM4A protein. 32 1.8
BC093075-1|AAH93075.1| 233|Homo sapiens lysosomal-associated pr... 32 1.8
BC000421-1|AAH00421.1| 233|Homo sapiens lysosomal-associated pr... 32 1.8
AY359028-1|AAQ89387.1| 215|Homo sapiens MTP protein. 32 1.8
AF098297-1|AAD05243.1| 450|Homo sapiens CBF1 interacting corepr... 31 3.2
BC003158-1|AAH03158.1| 233|Homo sapiens lysosomal-associated pr... 31 4.3
>U03644-1|AAA17853.1| 451|Homo sapiens recepin protein.
Length = 451
Score = 32.7 bits (71), Expect = 1.4
Identities = 21/92 (22%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Frame = -3
Query: 576 DDLMKRIVVEMGAIHF*LLDETPHMKDQV-YLYEQSAGAEKAHFDDKSKRTIRCEFQYLY 400
++LM++ + E + LL +K+ + ++YE GA+K ++K K E +Y +
Sbjct: 40 EELMQQYLKEQESYDNRLLMGDERVKNGLNFMYEAPPGAKK---ENKEKEETEGETEYKF 96
Query: 399 EYRRNSCRHREIVEPFHVRDYSLMGTINQKRC 304
E+++ + R + + ++RD + RC
Sbjct: 97 EWQKGAPREKYAKDDMNIRDQPFGIQVRNVRC 128
>BC046098-1|AAH46098.1| 450|Homo sapiens CBF1 interacting
corepressor protein.
Length = 450
Score = 32.7 bits (71), Expect = 1.4
Identities = 21/92 (22%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Frame = -3
Query: 576 DDLMKRIVVEMGAIHF*LLDETPHMKDQV-YLYEQSAGAEKAHFDDKSKRTIRCEFQYLY 400
++LM++ + E + LL +K+ + ++YE GA+K ++K K E +Y +
Sbjct: 40 EELMQQYLKEQESYDNRLLMGDERVKNGLNFMYEAPPGAKK---ENKEKEETEGETEYKF 96
Query: 399 EYRRNSCRHREIVEPFHVRDYSLMGTINQKRC 304
E+++ + R + + ++RD + RC
Sbjct: 97 EWQKGAPREKYAKDDMNIRDQPFGIQVRNVRC 128
>BC038987-1|AAH38987.1| 289|Homo sapiens Similar to RIKEN cDNA
1700023B02 gene protein.
Length = 289
Score = 32.7 bits (71), Expect = 1.4
Identities = 21/92 (22%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Frame = -3
Query: 576 DDLMKRIVVEMGAIHF*LLDETPHMKDQV-YLYEQSAGAEKAHFDDKSKRTIRCEFQYLY 400
++LM++ + E + LL +K+ + ++YE GA+K ++K K E +Y +
Sbjct: 40 EELMQQYLKEQESYDNRLLMGDERVKNGLNFMYEAPPGAKK---ENKEKEETEGETEYKF 96
Query: 399 EYRRNSCRHREIVEPFHVRDYSLMGTINQKRC 304
E+++ + R + + ++RD + RC
Sbjct: 97 EWQKGAPREKYAKDDMNIRDQPFGIQVRNVRC 128
>BC031018-1|AAH31018.1| 426|Homo sapiens CIR protein protein.
Length = 426
Score = 32.7 bits (71), Expect = 1.4
Identities = 21/92 (22%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Frame = -3
Query: 576 DDLMKRIVVEMGAIHF*LLDETPHMKDQV-YLYEQSAGAEKAHFDDKSKRTIRCEFQYLY 400
++LM++ + E + LL +K+ + ++YE GA+K ++K K E +Y +
Sbjct: 40 EELMQQYLKEQESYDNRLLMGDERVKNGLNFMYEAPPGAKK---ENKEKEETEGETEYKF 96
Query: 399 EYRRNSCRHREIVEPFHVRDYSLMGTINQKRC 304
E+++ + R + + ++RD + RC
Sbjct: 97 EWQKGAPREKYAKDDMNIRDQPFGIQVRNVRC 128
>BC021175-1|AAH21175.1| 227|Homo sapiens CIR protein protein.
Length = 227
Score = 32.7 bits (71), Expect = 1.4
Identities = 21/92 (22%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Frame = -3
Query: 576 DDLMKRIVVEMGAIHF*LLDETPHMKDQV-YLYEQSAGAEKAHFDDKSKRTIRCEFQYLY 400
++LM++ + E + LL +K+ + ++YE GA+K ++K K E +Y +
Sbjct: 40 EELMQQYLKEQESYDNRLLMGDERVKNGLNFMYEAPPGAKK---ENKEKEETEGETEYKF 96
Query: 399 EYRRNSCRHREIVEPFHVRDYSLMGTINQKRC 304
E+++ + R + + ++RD + RC
Sbjct: 97 EWQKGAPREKYAKDDMNIRDQPFGIQVRNVRC 128
>BC015040-1|AAH15040.1| 202|Homo sapiens CIR protein protein.
Length = 202
Score = 32.7 bits (71), Expect = 1.4
Identities = 21/92 (22%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Frame = -3
Query: 576 DDLMKRIVVEMGAIHF*LLDETPHMKDQV-YLYEQSAGAEKAHFDDKSKRTIRCEFQYLY 400
++LM++ + E + LL +K+ + ++YE GA+K ++K K E +Y +
Sbjct: 40 EELMQQYLKEQESYDNRLLMGDERVKNGLNFMYEAPPGAKK---ENKEKEETEGETEYKF 96
Query: 399 EYRRNSCRHREIVEPFHVRDYSLMGTINQKRC 304
E+++ + R + + ++RD + RC
Sbjct: 97 EWQKGAPREKYAKDDMNIRDQPFGIQVRNVRC 128
>AC018470-1|AAY24216.1| 450|Homo sapiens unknown protein.
Length = 450
Score = 32.7 bits (71), Expect = 1.4
Identities = 21/92 (22%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Frame = -3
Query: 576 DDLMKRIVVEMGAIHF*LLDETPHMKDQV-YLYEQSAGAEKAHFDDKSKRTIRCEFQYLY 400
++LM++ + E + LL +K+ + ++YE GA+K ++K K E +Y +
Sbjct: 40 EELMQQYLKEQESYDNRLLMGDERVKNGLNFMYEAPPGAKK---ENKEKEETEGETEYKF 96
Query: 399 EYRRNSCRHREIVEPFHVRDYSLMGTINQKRC 304
E+++ + R + + ++RD + RC
Sbjct: 97 EWQKGAPREKYAKDDMNIRDQPFGIQVRNVRC 128
>D14696-1|BAA03522.2| 254|Homo sapiens KIAA0108 protein.
Length = 254
Score = 32.3 bits (70), Expect = 1.8
Identities = 27/115 (23%), Positives = 49/115 (42%), Gaps = 10/115 (8%)
Frame = +1
Query: 106 RCCFCMPLRKGVLVFG----YINLFFSAFLVGLHSY-----GVHYQKNVFSVYHGITTGV 258
RCC C +R G ++ G +NL + L ++ V+ Q V Y+
Sbjct: 39 RCCGCCHVRTGTIILGTWYMVVNLLMAILLTVEVTHPNSMPAVNIQYEVIGNYYSSERMA 98
Query: 259 PTE-LSIALYCLEIILTSFLIYGAHKRIISYMKWFYYFTVTTTVAAILIQILEFT 420
+ A+ L I++S L+YGA + ++ F+ + + V + L+ I T
Sbjct: 99 DNACVLFAVSVLMFIISSMLVYGAISYQVGWLIPFFCYRLFDFVLSCLVAISSLT 153
>CR456758-1|CAG33039.1| 233|Homo sapiens LAPTM4A protein.
Length = 233
Score = 32.3 bits (70), Expect = 1.8
Identities = 27/115 (23%), Positives = 49/115 (42%), Gaps = 10/115 (8%)
Frame = +1
Query: 106 RCCFCMPLRKGVLVFG----YINLFFSAFLVGLHSY-----GVHYQKNVFSVYHGITTGV 258
RCC C +R G ++ G +NL + L ++ V+ Q V Y+
Sbjct: 18 RCCGCCHVRTGTIILGTWYMVVNLLMAILLTVEVTHPNSMPAVNIQYEVIGNYYSSERMA 77
Query: 259 PTE-LSIALYCLEIILTSFLIYGAHKRIISYMKWFYYFTVTTTVAAILIQILEFT 420
+ A+ L I++S L+YGA + ++ F+ + + V + L+ I T
Sbjct: 78 DNACVLFAVSVLMFIISSMLVYGAISYQVGWLIPFFCYRLFDFVLSCLVAISSLT 132
>BC093075-1|AAH93075.1| 233|Homo sapiens lysosomal-associated
protein transmembrane 4 alpha protein.
Length = 233
Score = 32.3 bits (70), Expect = 1.8
Identities = 27/115 (23%), Positives = 49/115 (42%), Gaps = 10/115 (8%)
Frame = +1
Query: 106 RCCFCMPLRKGVLVFG----YINLFFSAFLVGLHSY-----GVHYQKNVFSVYHGITTGV 258
RCC C +R G ++ G +NL + L ++ V+ Q V Y+
Sbjct: 18 RCCGCCHVRTGTIILGTWYMVVNLLMAILLTVEVTHPNSMPAVNIQYEVIGNYYSSERMA 77
Query: 259 PTE-LSIALYCLEIILTSFLIYGAHKRIISYMKWFYYFTVTTTVAAILIQILEFT 420
+ A+ L I++S L+YGA + ++ F+ + + V + L+ I T
Sbjct: 78 DNACVLFAVSVLMFIISSMLVYGAISYQVGWLIPFFCYRLFDFVLSCLVAISSLT 132
>BC000421-1|AAH00421.1| 233|Homo sapiens lysosomal-associated
protein transmembrane 4 alpha protein.
Length = 233
Score = 32.3 bits (70), Expect = 1.8
Identities = 27/115 (23%), Positives = 49/115 (42%), Gaps = 10/115 (8%)
Frame = +1
Query: 106 RCCFCMPLRKGVLVFG----YINLFFSAFLVGLHSY-----GVHYQKNVFSVYHGITTGV 258
RCC C +R G ++ G +NL + L ++ V+ Q V Y+
Sbjct: 18 RCCGCCHVRTGTIILGTWYMVVNLLMAILLTVEVTHPNSMPAVNIQYEVIGNYYSSERMA 77
Query: 259 PTE-LSIALYCLEIILTSFLIYGAHKRIISYMKWFYYFTVTTTVAAILIQILEFT 420
+ A+ L I++S L+YGA + ++ F+ + + V + L+ I T
Sbjct: 78 DNACVLFAVSVLMFIISSMLVYGAISYQVGWLIPFFCYRLFDFVLSCLVAISSLT 132
>AY359028-1|AAQ89387.1| 215|Homo sapiens MTP protein.
Length = 215
Score = 32.3 bits (70), Expect = 1.8
Identities = 27/115 (23%), Positives = 49/115 (42%), Gaps = 10/115 (8%)
Frame = +1
Query: 106 RCCFCMPLRKGVLVFG----YINLFFSAFLVGLHSY-----GVHYQKNVFSVYHGITTGV 258
RCC C +R G ++ G +NL + L ++ V+ Q V Y+
Sbjct: 18 RCCGCCHVRTGTIILGTWYMVVNLLMAILLTVEVTHPNSMPAVNIQYEVIGNYYSSERMA 77
Query: 259 PTE-LSIALYCLEIILTSFLIYGAHKRIISYMKWFYYFTVTTTVAAILIQILEFT 420
+ A+ L I++S L+YGA + ++ F+ + + V + L+ I T
Sbjct: 78 DNACVLFAVSVLMFIISSMLVYGAISYQVGWLIPFFCYRLFDFVLSCLVAISSLT 132
>AF098297-1|AAD05243.1| 450|Homo sapiens CBF1 interacting
corepressor CIR protein.
Length = 450
Score = 31.5 bits (68), Expect = 3.2
Identities = 21/92 (22%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Frame = -3
Query: 576 DDLMKRIVVEMGAIHF*LLDETPHMKDQV-YLYEQSAGAEKAHFDDKSKRTIRCEFQYLY 400
++LM++ + E + LL +K+ + ++YE GA+K ++K K E +Y +
Sbjct: 40 EELMQQYLREQESYDNRLLMGDERVKNGLNFMYEAPPGAKK---ENKEKEETEGETEYKF 96
Query: 399 EYRRNSCRHREIVEPFHVRDYSLMGTINQKRC 304
E+++ + R + + +RD + RC
Sbjct: 97 EWQKGAPREKYAKDDMSIRDQPFGIQVRNVRC 128
>BC003158-1|AAH03158.1| 233|Homo sapiens lysosomal-associated
protein transmembrane 4 alpha protein.
Length = 233
Score = 31.1 bits (67), Expect = 4.3
Identities = 26/115 (22%), Positives = 49/115 (42%), Gaps = 10/115 (8%)
Frame = +1
Query: 106 RCCFCMPLRKGVLVFG----YINLFFSAFLVGLHSY-----GVHYQKNVFSVYHGITTGV 258
RCC C +R G ++ G +NL + L ++ V+ Q V Y+
Sbjct: 18 RCCGCCHVRTGTIILGTWYMVVNLLMAILLTVEVTHPNSMPAVNIQYEVIGNYYSSERMA 77
Query: 259 PTE-LSIALYCLEIILTSFLIYGAHKRIISYMKWFYYFTVTTTVAAILIQILEFT 420
+ A+ L I++S L+YG+ + ++ F+ + + V + L+ I T
Sbjct: 78 DNACVLFAVSVLMFIISSMLVYGSISYQVGWLIPFFCYRLFDFVLSCLVAISSLT 132
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,019,285
Number of Sequences: 237096
Number of extensions: 1883750
Number of successful extensions: 3084
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3017
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3084
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8679165170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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