Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8l09
         (731 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-1821|AAF58297.2|  260|Drosophila melanogaster CG13353-P...    37   0.033
BT023589-1|AAY84989.1|  144|Drosophila melanogaster IP09353p pro...    31   1.2  
AE014297-3257|AAF56085.1|  223|Drosophila melanogaster CG13837-P...    29   8.6  
AE013599-700|AAF59053.1|  582|Drosophila melanogaster CG14743-PA...    29   8.6  

>AE013599-1821|AAF58297.2|  260|Drosophila melanogaster CG13353-PA
           protein.
          Length = 260

 Score = 36.7 bits (81), Expect = 0.033
 Identities = 37/136 (27%), Positives = 58/136 (42%), Gaps = 2/136 (1%)
 Frame = +1

Query: 100 FGRCCFCMPLRKGVLVFGYINLFFSAFLVGLHSYGVHYQKNVFSVYHGITTGVPTEL--S 273
           F +CC+C  LR GVL+FG I  F + F+      G   +    + Y       P  L  +
Sbjct: 112 FTKCCYCYSLRFGVLLFGCI--FLTWFIYITIGTGFMMECIFPNEYQRSLIPAPAALKAT 169

Query: 274 IALYCLEIILTSFLIYGAHKRIISYMKWFYYFTVTTTVAAILIQILEFTSYRSFGFIIEV 453
           +      II+++ L  G H    +    F  F V T +  I++ I   T Y SF  II +
Sbjct: 170 MVFSFFGIIVSAMLCLGVHN---NNEMLFLPFLVFTPI-WIIVHIFALTVY-SFNTIIII 224

Query: 454 CLFSASGLFIQIYLIL 501
                  L +  +L++
Sbjct: 225 LTVITMLLLVYAWLVV 240



 Score = 29.5 bits (63), Expect = 4.9
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +1

Query: 100 FGRCCFCMPLRKGVLVFGYINLFFSAFLVGLHSYGVHYQKNV 225
           F +CCF +PL  G ++ G I + F    +  HS    + K V
Sbjct: 3   FKKCCFFLPLNVGCIIIGAIFITFHVGELITHSDDTIFIKQV 44


>BT023589-1|AAY84989.1|  144|Drosophila melanogaster IP09353p
           protein.
          Length = 144

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 29/147 (19%), Positives = 60/147 (40%), Gaps = 1/147 (0%)
 Frame = +1

Query: 100 FGRCCFCMPLRKGVLVFGYINLFFSAFLVGLHSYGVHYQKNVFSVYHGITTGVPTELSIA 279
           F +CCF +PL  G ++ G I   F  F VG     +     +F          P  +S  
Sbjct: 3   FKKCCFFLPLNVGCIIIGAI---FITFHVG---ELITSDDTIFIKQVSHKWWAPVIMS-P 55

Query: 280 LYCLEIILTSFLIYGAHKRIISY-MKWFYYFTVTTTVAAILIQILEFTSYRSFGFIIEVC 456
           +  +  + +  L+Y A K    + + W   + +  ++   L+ +++    +    I+ V 
Sbjct: 56  ILTIGTLSSILLVYAASKSKRGFVLMWIIIYAIILSL-YFLMAVVQLARSKPSPIILAVQ 114

Query: 457 LFSASGLFIQIYLILHVRSLIKKLEMD 537
           +F   GL   + ++L     +  ++ D
Sbjct: 115 VFIIVGLVYSLLIVLAFYRYLSSVDSD 141


>AE014297-3257|AAF56085.1|  223|Drosophila melanogaster CG13837-PA
           protein.
          Length = 223

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = -3

Query: 510 PHMKDQVYLYEQSAGAEKAHFDDKSKRTIRCEFQYLYEYRRNSC 379
           PH ++  Y Y  S+G++  H         RC   Y + Y R SC
Sbjct: 163 PHPRNCAYFYYCSSGSKLVH---------RCHLNYTWHYERRSC 197


>AE013599-700|AAF59053.1|  582|Drosophila melanogaster CG14743-PA
           protein.
          Length = 582

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 12/43 (27%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
 Frame = +1

Query: 280 LYCLEIILTSFLIYGAHKRII--SYMKWFYYFTVTTTVAAILI 402
           L CL+I+LT F+I+   + ++   Y +W+Y       + ++L+
Sbjct: 346 LNCLQIVLTPFVIFALVETMLVHKYAEWYYVPQFRMAIWSLLV 388


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,442,400
Number of Sequences: 53049
Number of extensions: 590690
Number of successful extensions: 1359
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1335
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1358
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3293648160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)