Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8l08
         (321 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_O97275 Cluster: Putative uncharacterized protein MAL3P5...    32   2.1  
UniRef50_Q8IIL8 Cluster: Putative uncharacterized protein; n=1; ...    31   3.7  
UniRef50_A5JZC7 Cluster: Putative uncharacterized protein; n=1; ...    31   3.7  
UniRef50_Q8IID9 Cluster: Putative uncharacterized protein; n=1; ...    31   6.5  
UniRef50_O82379 Cluster: F-box/LRR-repeat/Kelch-repeat protein A...    31   6.5  
UniRef50_Q14N99 Cluster: Hypothetical nicotinate-nucleotide aden...    30   8.6  
UniRef50_A7FPC4 Cluster: Putative uncharacterized protein; n=1; ...    30   8.6  
UniRef50_Q4DXK2 Cluster: Putative uncharacterized protein; n=2; ...    30   8.6  
UniRef50_Q4CVY8 Cluster: Thymidine kinase, putative; n=3; Eukary...    30   8.6  

>UniRef50_O97275 Cluster: Putative uncharacterized protein MAL3P5.4;
           n=2; Plasmodium|Rep: Putative uncharacterized protein
           MAL3P5.4 - Plasmodium falciparum (isolate 3D7)
          Length = 1816

 Score = 32.3 bits (70), Expect = 2.1
 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = -2

Query: 260 KQKKKNESIFRYINIYLSSTV-PTYHSYNVYI 168
           KQK  N S F Y N+Y ++ V   Y +YN YI
Sbjct: 68  KQKNNNNSYFSYCNVYKNNDVNNNYTAYNYYI 99


>UniRef50_Q8IIL8 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 637

 Score = 31.5 bits (68), Expect = 3.7
 Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
 Frame = +3

Query: 123 LCDRC*RL*GRKYKDYIHIIRVIGRYRTR*VNVDVSKNRFIFFLLFNLDNKMYF-*NKNK 299
           L D C ++    YK+   I  +   Y     N  ++ N  +FF+LFN+ NK+Y   NKNK
Sbjct: 212 LIDLCKKIDSINYKNSKLIFNICNVY-----NKVMALNDELFFILFNILNKIYVQDNKNK 266

Query: 300 TQYFKKK 320
           +   K K
Sbjct: 267 SIVMKDK 273


>UniRef50_A5JZC7 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium vivax|Rep: Putative uncharacterized protein -
            Plasmodium vivax
          Length = 3304

 Score = 31.5 bits (68), Expect = 3.7
 Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
 Frame = +3

Query: 162  KDYIHIIRVIGRYRTR*VNVDVSKNRFIFFLLFNLDN--KMYF*NKNKTQYFK 314
            K Y ++I +   YR   +NVD++KN  I +LL  LDN  K  F NK K + FK
Sbjct: 1495 KKYFNVI-IKNIYRCI-LNVDLNKNELIIYLLI-LDNFLKAKFFNKKKGKIFK 1544


>UniRef50_Q8IID9 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 296

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = -2

Query: 254 KKKNESIFRYINIYLSSTVPTYHSYNVYI 168
           +KKN  I+ Y N Y+  ++P + +Y +YI
Sbjct: 185 EKKNLHIYAYSNTYVKKSIPLFFTYLLYI 213


>UniRef50_O82379 Cluster: F-box/LRR-repeat/Kelch-repeat protein
           At2g29770; n=1; Arabidopsis thaliana|Rep:
           F-box/LRR-repeat/Kelch-repeat protein At2g29770 -
           Arabidopsis thaliana (Mouse-ear cress)
          Length = 387

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = -1

Query: 153 SLIIFSTYHTARLYVWRVEIRRTVSYQLL*EKLEKVPPFLH 31
           +LI FS Y+T  LY+    I R +S  L   +++ +PP  H
Sbjct: 88  ALIGFSPYNTTNLYILNCNIPRNISLHL--REIKSLPPLNH 126


>UniRef50_Q14N99 Cluster: Hypothetical nicotinate-nucleotide
           adenylyltransferase protein; n=1; Spiroplasma citri|Rep:
           Hypothetical nicotinate-nucleotide adenylyltransferase
           protein - Spiroplasma citri
          Length = 365

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = -2

Query: 260 KQKKKNESIFRYINIYLSSTVPTYHSYNVY 171
           KQK+K   + +Y+  +LS  +PT+H+Y  Y
Sbjct: 237 KQKQK-AYLTKYLPTFLSEPIPTWHAYTAY 265


>UniRef50_A7FPC4 Cluster: Putative uncharacterized protein; n=1;
           Yersinia pseudotuberculosis IP 31758|Rep: Putative
           uncharacterized protein - Yersinia pseudotuberculosis IP
           31758
          Length = 137

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 17/53 (32%), Positives = 27/53 (50%)
 Frame = -2

Query: 233 FRYINIYLSSTVPTYHSYNVYIIFIFPPL*SLAPITQLDCMYGGWR*GEPSLI 75
           ++YIN Y+        S +++I F+  PL   A ++ L  +  GWR    SLI
Sbjct: 32  YKYINSYMVMAKEITFSASIFIAFLSIPLLIYALLSGLIYLVSGWRFKYDSLI 84


>UniRef50_Q4DXK2 Cluster: Putative uncharacterized protein; n=2;
           Trypanosoma cruzi|Rep: Putative uncharacterized protein
           - Trypanosoma cruzi
          Length = 731

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 12/31 (38%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
 Frame = +1

Query: 88  SPYLHPPYIQ-SSCVIGAKDYKGGNIKIIYT 177
           SP++HP  +Q  + V+  K YKGG + ++Y+
Sbjct: 558 SPFIHPDGLQWFAAVLRGKPYKGGFLTLVYS 588


>UniRef50_Q4CVY8 Cluster: Thymidine kinase, putative; n=3;
           Eukaryota|Rep: Thymidine kinase, putative - Trypanosoma
           cruzi
          Length = 415

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
 Frame = -2

Query: 251 KKNE--SIFRYINIYLSSTVPTYHSYNVYIIFIFPP 150
           KKNE  + F Y+ +++    PT+    +Y+IF FPP
Sbjct: 55  KKNEFYTPFLYLFVWVVDCTPTHRFTLLYLIFAFPP 90


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 290,392,802
Number of Sequences: 1657284
Number of extensions: 5359549
Number of successful extensions: 10267
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10076
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10267
length of database: 575,637,011
effective HSP length: 83
effective length of database: 438,082,439
effective search space used: 10075896097
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)