Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8l08
         (321 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    23   1.0  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    22   1.8  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   3.2  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   4.2  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   4.2  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   4.2  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    20   7.3  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    20   7.3  

>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 22.6 bits (46), Expect = 1.0
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -2

Query: 197 PTYHSYNVYIIFIF 156
           PTY  Y ++++F F
Sbjct: 28  PTYRLYKIFVVFSF 41


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.8 bits (44), Expect = 1.8
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -1

Query: 162 YISSLIIFSTYHTARLYVW 106
           ++ + IIF  +HT   +VW
Sbjct: 114 FVVTNIIFVLFHTYEAFVW 132


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 3.2
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = -1

Query: 162 YISSLIIFSTYHTARLYVWRVEIRRTVSYQL 70
           +I+  +IF  + T +LY W   ++ +V   L
Sbjct: 533 FITKQLIFMIFVTYQLYCWSSFLKISVLQSL 563


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 20.6 bits (41), Expect = 4.2
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 205 LDK*MLMYRKIDSFFF 252
           LDK   ++R +D +FF
Sbjct: 332 LDKDAFIHRTVDDYFF 347


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 20.6 bits (41), Expect = 4.2
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -1

Query: 174 VYNLYISSLIIFSTY 130
           ++NLY+  L++F  Y
Sbjct: 119 IFNLYMVLLLLFDAY 133


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 20.6 bits (41), Expect = 4.2
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +3

Query: 156 KYKDYIHIIRVIGRYRTR*VNVDVSKNRFI 245
           KYK  +H++RV G    R ++    + +FI
Sbjct: 151 KYKPTVHLVRV-GTEPRRVISFPFPETQFI 179


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 19.8 bits (39), Expect = 7.3
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -2

Query: 122 LDCMYGGWR 96
           LDC +G WR
Sbjct: 507 LDCGFGRWR 515


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 19.8 bits (39), Expect = 7.3
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +3

Query: 84  RFSLSPPSIHTI 119
           R SLSP S HT+
Sbjct: 52  RESLSPSSAHTV 63


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,241
Number of Sequences: 336
Number of extensions: 1566
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6048897
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)