Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8l08
         (321 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058621-1|AAL13850.1|  426|Drosophila melanogaster LD31377p pro...    28   2.3  
AJ006219-1|CAA06918.1|  426|Drosophila melanogaster clathrin-ass...    28   2.3  
AF110231-1|AAF14247.1|  426|Drosophila melanogaster clathrin-ass...    28   2.3  
AE014297-967|AAF54399.1|  426|Drosophila melanogaster CG9388-PA ...    28   2.3  
AY118952-1|AAM50812.1|  377|Drosophila melanogaster LD34822p pro...    27   5.4  
AF017777-11|AAC28411.1|  574|Drosophila melanogaster misato prot...    27   5.4  
AE014298-3139|AAF50817.1|  574|Drosophila melanogaster CG1424-PA...    27   5.4  
AY075350-1|AAL68209.2|  169|Drosophila melanogaster GH26082p pro...    27   7.1  
AE013599-590|AAF59134.1|  159|Drosophila melanogaster CG18316-PA...    27   7.1  

>AY058621-1|AAL13850.1|  426|Drosophila melanogaster LD31377p
           protein.
          Length = 426

 Score = 28.3 bits (60), Expect = 2.3
 Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
 Frame = -2

Query: 242 ESIFRYI---NIYLSSTVPTYHSYNVYIIFIF 156
           E+ F YI   N+Y+ ST P   + N+ ++F+F
Sbjct: 55  ETTFAYIKTNNLYIVSTTPRNKNVNIALVFVF 86


>AJ006219-1|CAA06918.1|  426|Drosophila melanogaster
           clathrin-associated protein protein.
          Length = 426

 Score = 28.3 bits (60), Expect = 2.3
 Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
 Frame = -2

Query: 242 ESIFRYI---NIYLSSTVPTYHSYNVYIIFIF 156
           E+ F YI   N+Y+ ST P   + N+ ++F+F
Sbjct: 55  ETTFAYIKTNNLYIVSTTPRNKNVNIALVFVF 86


>AF110231-1|AAF14247.1|  426|Drosophila melanogaster
           clathrin-associated adaptor complexAP-1 medium chain
           protein.
          Length = 426

 Score = 28.3 bits (60), Expect = 2.3
 Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
 Frame = -2

Query: 242 ESIFRYI---NIYLSSTVPTYHSYNVYIIFIF 156
           E+ F YI   N+Y+ ST P   + N+ ++F+F
Sbjct: 55  ETTFAYIKTNNLYIVSTTPRNKNVNIALVFVF 86


>AE014297-967|AAF54399.1|  426|Drosophila melanogaster CG9388-PA
           protein.
          Length = 426

 Score = 28.3 bits (60), Expect = 2.3
 Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
 Frame = -2

Query: 242 ESIFRYI---NIYLSSTVPTYHSYNVYIIFIF 156
           E+ F YI   N+Y+ ST P   + N+ ++F+F
Sbjct: 55  ETTFAYIKTNNLYIVSTTPRNKNVNIALVFVF 86


>AY118952-1|AAM50812.1|  377|Drosophila melanogaster LD34822p
           protein.
          Length = 377

 Score = 27.1 bits (57), Expect = 5.4
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = -3

Query: 235 FFDTSTFTYRVRYLPITLI 179
           FFDT+T +YR+R  P +L+
Sbjct: 140 FFDTATLSYRLRQTPESLL 158


>AF017777-11|AAC28411.1|  574|Drosophila melanogaster misato
           protein.
          Length = 574

 Score = 27.1 bits (57), Expect = 5.4
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = -3

Query: 235 FFDTSTFTYRVRYLPITLI 179
           FFDT+T +YR+R  P +L+
Sbjct: 337 FFDTATLSYRLRQTPESLL 355


>AE014298-3139|AAF50817.1|  574|Drosophila melanogaster CG1424-PA
           protein.
          Length = 574

 Score = 27.1 bits (57), Expect = 5.4
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = -3

Query: 235 FFDTSTFTYRVRYLPITLI 179
           FFDT+T +YR+R  P +L+
Sbjct: 337 FFDTATLSYRLRQTPESLL 355


>AY075350-1|AAL68209.2|  169|Drosophila melanogaster GH26082p
           protein.
          Length = 169

 Score = 26.6 bits (56), Expect = 7.1
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 80  LINSYERSLKKCPLFYTK 27
           +   Y + L+KCP FYTK
Sbjct: 122 IFTEYSKVLQKCPKFYTK 139


>AE013599-590|AAF59134.1|  159|Drosophila melanogaster CG18316-PA
           protein.
          Length = 159

 Score = 26.6 bits (56), Expect = 7.1
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 80  LINSYERSLKKCPLFYTK 27
           +   Y + L+KCP FYTK
Sbjct: 112 IFTEYSKVLQKCPKFYTK 129


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,812,328
Number of Sequences: 53049
Number of extensions: 230156
Number of successful extensions: 330
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 328
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 330
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 674007744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)