Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8l05
(659 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC29A3.04 |rpl8||60S ribosomal protein L7a |Schizosaccharomyce... 118 1e-27
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 28 1.0
SPAC458.05 |pik3|vps34|phosphatidylinositol 3-kinase Pik3|Schizo... 27 1.8
SPAC6F12.12 |par2|pbp2|protein phosphatase regulatory subunit Pa... 26 5.5
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 26 5.5
SPCC24B10.15 |||PINc domain|Schizosaccharomyces pombe|chr 3|||Ma... 25 7.3
SPBC27B12.08 |||AP-1 accessory protein |Schizosaccharomyces pomb... 25 9.7
SPAC15A10.10 |mde6||Muskelin homolog|Schizosaccharomyces pombe|c... 25 9.7
SPAC1851.03 |ckb1||CK2 family regulatory subunit |Schizosaccharo... 25 9.7
SPAC869.10c |||proline specific permease |Schizosaccharomyces po... 25 9.7
>SPBC29A3.04 |rpl8||60S ribosomal protein L7a |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 259
Score = 118 bits (283), Expect = 1e-27
Identities = 52/78 (66%), Positives = 63/78 (80%)
Frame = +2
Query: 296 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 475
NPLF RP++F IGQ IQP RDLSRFV+WP+YIR+QR++ +L RLKVPP I QF +TLD
Sbjct: 24 NPLFVSRPRSFGIGQDIQPKRDLSRFVKWPEYIRLQRRRKILNLRLKVPPAIAQFQKTLD 83
Query: 476 KTTAKGLFKILEKYRPET 529
K TA +FK+L KYRPET
Sbjct: 84 KNTATQVFKLLNKYRPET 101
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 28.3 bits (60), Expect = 1.0
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = +1
Query: 331 YWSGHSANS*LVQICKMAQVYPHPASEGCTSASSESAPSDQPIYPDTGQDYS 486
Y+ + N + Q+ A YP+ +S SAS S+P+ P T + S
Sbjct: 296 YFKENGLNYDIDQLISKAPSYPYSSSRPSASASLASSPTRSAFRPKTSETVS 347
>SPAC458.05 |pik3|vps34|phosphatidylinositol 3-kinase
Pik3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 801
Score = 27.5 bits (58), Expect = 1.8
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -3
Query: 228 FLG*KTKLVRQPCFQSNFTNNSLFVTEIL*LTKRTWL 118
F G ++ + Q CF S N SL TE+ ++ WL
Sbjct: 41 FSGNESGSLMQKCFVSKIPNKSLLPTELSKISTHEWL 77
>SPAC6F12.12 |par2|pbp2|protein phosphatase regulatory subunit
Par2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 627
Score = 25.8 bits (54), Expect = 5.5
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 410 KAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILE 511
KAVL LK P IN F + L + +F++LE
Sbjct: 463 KAVLTGILKYWPRINSFKELLFLNEIEDIFEVLE 496
>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
Tor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2337
Score = 25.8 bits (54), Expect = 5.5
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1
Query: 638 LCLCRIGWC 612
LCLC IGWC
Sbjct: 2326 LCLCYIGWC 2334
>SPCC24B10.15 |||PINc domain|Schizosaccharomyces pombe|chr
3|||Manual
Length = 462
Score = 25.4 bits (53), Expect = 7.3
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = -2
Query: 592 LIFLGNLSFSSFPQPLFPGCFSLRPVFLQNLEKALSCSLVQCLGKLVDRRGHFQTTL 422
L F L +S Q FP FS L+NL + ++ Q L + R +T+
Sbjct: 197 LSFSKGLEAASIVQTSFPSAFSSNSENLENLSMDIDLTVSQPLATATNHRNQGASTV 253
>SPBC27B12.08 |||AP-1 accessory protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1919
Score = 25.0 bits (52), Expect = 9.7
Identities = 21/84 (25%), Positives = 43/84 (51%), Gaps = 8/84 (9%)
Frame = -2
Query: 511 LQNLEKALSCSLVQCLGKLVDRRGHFQTTLKYS----LLTLDADILGPS-YKSGQVTSWL 347
L+N ++ L +L + L +V++ H TTL Y+ LL + + + S K T+++
Sbjct: 1690 LKNSKQELLAALRKLLSTMVEQNDHTCTTLIYTLFEHLLNIYKETINDSDKKEKNETAFM 1749
Query: 346 NALTNSKVLWPLLEER---IHNFL 284
+ + + P+L+ +H+FL
Sbjct: 1750 SMVLVLTLAAPILDSEQLVVHDFL 1773
>SPAC15A10.10 |mde6||Muskelin homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 716
Score = 25.0 bits (52), Expect = 9.7
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -2
Query: 163 TFCYRNIVINKTHMAFTFF 107
+FC R+I+ +K H FT F
Sbjct: 495 SFCQRSIMDSKNHRIFTMF 513
>SPAC1851.03 |ckb1||CK2 family regulatory subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 231
Score = 25.0 bits (52), Expect = 9.7
Identities = 9/13 (69%), Positives = 13/13 (100%)
Frame = +2
Query: 482 TAKGLFKILEKYR 520
TA+GL+K+LEKY+
Sbjct: 94 TAQGLYKMLEKYK 106
>SPAC869.10c |||proline specific permease |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 552
Score = 25.0 bits (52), Expect = 9.7
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -3
Query: 300 GFTIFLGSTFLTTNGAAATFFPTFFL 223
GFT+F+G TF N AA FL
Sbjct: 472 GFTVFVGHTFTAGNFIAAYITLPIFL 497
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,593,882
Number of Sequences: 5004
Number of extensions: 49312
Number of successful extensions: 152
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 152
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 299817502
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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