Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8l02
         (577 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    27   0.087
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.35 
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       25   0.46 
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    25   0.46 
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    25   0.46 
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     24   1.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.3  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        22   3.3  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   3.3  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    22   4.3  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   5.7  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   7.5  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   9.9  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   9.9  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   9.9  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 27.5 bits (58), Expect = 0.087
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -2

Query: 189 PRRSISPAITQRERRSDTPGSMTAPRGPLS 100
           P  + SPA  + E  S TPG +  P  P S
Sbjct: 39  PNSAASPAPPEEEAASPTPGDVPTPSSPRS 68



 Score = 23.8 bits (49), Expect = 1.1
 Identities = 16/39 (41%), Positives = 18/39 (46%)
 Frame = -2

Query: 222  REPRTPPAGFGPRRSISPAITQRERRSDTPGSMTAPRGP 106
            R+P    AG   R S SPA +    RS TP S    R P
Sbjct: 920  RQPAETHAGSPCRNSASPASSD---RSGTPRSTNGDRKP 955


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.4 bits (53), Expect = 0.35
 Identities = 10/48 (20%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
 Frame = +1

Query: 343 YVEFVCPYLRCYFVLCVLFVYYLH--SCTVGYIFMLDFVIFSTSFFLY 480
           Y  F+   +    ++C+ + YY+H   C    IF +  +     ++ Y
Sbjct: 242 YYAFILFTVHLLLLVCIYYFYYMHLLFCCAFIIFTMHLLFLLCIYYFY 289



 Score = 21.4 bits (43), Expect = 5.7
 Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 4/44 (9%)
 Frame = +1

Query: 355 VCPYLRCYFVLCVLFVYYLHSC----TVGYIFMLDFVIFSTSFF 474
           +C Y   Y  + +L VYY +      TV  +F+L    F    F
Sbjct: 98  LCTYYFYYAFIILLCVYYFYYAFIIFTVHLLFLLCIYYFVVPLF 141



 Score = 21.4 bits (43), Expect = 5.7
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +3

Query: 276 LLPYYFEFVFTVFLFSLYF 332
           L  YYF + F + L   YF
Sbjct: 98  LCTYYFYYAFIILLCVYYF 116



 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/31 (22%), Positives = 13/31 (41%)
 Frame = +1

Query: 388 CVLFVYYLHSCTVGYIFMLDFVIFSTSFFLY 480
           C   ++ +H     Y F   F+I    ++ Y
Sbjct: 87  CPFIIFTVHFLLCTYYFYYAFIILLCVYYFY 117


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 25.0 bits (52), Expect = 0.46
 Identities = 10/37 (27%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
 Frame = -1

Query: 430 NQQYKSEDSKQTKHKEQNNNEDK--DRQTQHKLNQKY 326
           N+Q + E  +Q +HK+Q   + +  ++QT   ++Q +
Sbjct: 72  NEQARREREEQERHKQQQQEKQQKIEQQTHSSIHQHH 108


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 25.0 bits (52), Expect = 0.46
 Identities = 10/37 (27%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
 Frame = -1

Query: 430 NQQYKSEDSKQTKHKEQNNNEDK--DRQTQHKLNQKY 326
           N+Q + E  +Q +HK+Q   + +  ++QT   ++Q +
Sbjct: 223 NEQARREREEQERHKQQQQEKQQKIEQQTHSSIHQHH 259


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 25.0 bits (52), Expect = 0.46
 Identities = 10/37 (27%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
 Frame = -1

Query: 430 NQQYKSEDSKQTKHKEQNNNEDK--DRQTQHKLNQKY 326
           N+Q + E  +Q +HK+Q   + +  ++QT   ++Q +
Sbjct: 282 NEQARREREEQERHKQQQQEKQQKIEQQTHSSIHQHH 318


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -3

Query: 548 PRDWSPTSHSSRCRASKLGIG*E*RKKEVENIT 450
           PR+ SPT HS     SK G G     ++ +NI+
Sbjct: 202 PRNGSPTDHSPVLNLSKSGGGSAGSLEDDDNIS 234


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 14/45 (31%), Positives = 17/45 (37%)
 Frame = -2

Query: 189  PRRSISPAITQRERRSDTPGSMTAPRGPLSATYGRARWKSSKTPP 55
            P   ++PA  Q     DT  S T    P   T     W S+ T P
Sbjct: 1006 PPEPVTPAPPQVTTGVDTGASSTEHMHPDWTTKPSTWWSSTTTSP 1050


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = -1

Query: 112 RPVIRHLRTRPVEVQQNSPTDAPTARRVRI 23
           RP+  H+R + VE+  N       +R++R+
Sbjct: 53  RPLPNHIRLKIVEMAANGIRPCVISRQLRV 82


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
 Frame = +1

Query: 370 RCYFVLCVLFVYYLHSCTVGYIF---MLDFVIFSTSFFLYSHPI 492
           +CYF+  VL    +  C + +IF   M +  +    F   S PI
Sbjct: 54  KCYFLRMVLIDLLIVGCILKHIFNILMKNVTLNDVVFIFCSAPI 97


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +1

Query: 409 LHSCTVGYIFMLDFVIFSTSFFLYS 483
           L++C  GY F  +F I    F L++
Sbjct: 243 LYTCIAGYEFNANFTISYILFALFN 267


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +3

Query: 189 DQNQQGGFW 215
           D+N  GGFW
Sbjct: 378 DENNNGGFW 386


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -3

Query: 110 ARYPPPTDAPGGSPAKL 60
           A  PPP     GSPA +
Sbjct: 31  AAAPPPATTSSGSPASV 47


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 6/20 (30%), Positives = 12/20 (60%)
 Frame = -1

Query: 430 NQQYKSEDSKQTKHKEQNNN 371
           NQ+Y+++     +H + N N
Sbjct: 291 NQEYRTDRKHTQQHYQMNQN 310


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 6/20 (30%), Positives = 12/20 (60%)
 Frame = -1

Query: 430 NQQYKSEDSKQTKHKEQNNN 371
           NQ+Y+++     +H + N N
Sbjct: 239 NQEYRTDRKHTQQHYQMNQN 258


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 6/20 (30%), Positives = 12/20 (60%)
 Frame = -1

Query: 430 NQQYKSEDSKQTKHKEQNNN 371
           NQ+Y+++     +H + N N
Sbjct: 422 NQEYRTDRKHTQQHYQMNQN 441


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,657
Number of Sequences: 336
Number of extensions: 3480
Number of successful extensions: 19
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14308417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)