Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8l02
(577 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF255673-1|AAG18328.1| 1011|Drosophila melanogaster rho guanine ... 32 0.48
AY051816-1|AAK93240.1| 845|Drosophila melanogaster LD32311p pro... 31 1.5
AJ005441-1|CAA06544.2| 845|Drosophila melanogaster Kruppel homo... 31 1.5
AJ005440-1|CAA06543.2| 791|Drosophila melanogaster Kruppel homo... 31 1.5
AE014297-309|AAN13252.1| 1393|Drosophila melanogaster CG31551-PA... 31 1.5
AE014134-1049|AAG22417.1| 791|Drosophila melanogaster CG18783-P... 31 1.5
AE014134-1048|AAF52343.2| 845|Drosophila melanogaster CG18783-P... 31 1.5
AE014298-2744|AAF48863.1| 1895|Drosophila melanogaster CG15040-P... 30 2.0
AE014298-1439|AAF46576.2| 313|Drosophila melanogaster CG15307-P... 30 2.0
AY070715-1|AAL48186.1| 654|Drosophila melanogaster SD08659p pro... 29 3.4
AE014296-168|AAS64926.1| 658|Drosophila melanogaster CG18214-PF... 29 3.4
AE014296-167|AAF47435.3| 658|Drosophila melanogaster CG18214-PB... 29 3.4
BT025932-1|ABG02176.1| 918|Drosophila melanogaster IP13252p pro... 29 4.5
AF216663-1|AAF32293.1| 2263|Drosophila melanogaster guanine-nucl... 29 4.5
AF215635-1|AAF25952.1| 2263|Drosophila melanogaster Rho family g... 29 4.5
AE014296-166|AAN11456.1| 804|Drosophila melanogaster CG18214-PD... 29 4.5
AE014296-165|AAN11455.1| 2263|Drosophila melanogaster CG18214-PC... 29 4.5
AE014296-164|AAF47436.3| 2263|Drosophila melanogaster CG18214-PA... 29 4.5
AE013599-1459|AAM68673.2| 762|Drosophila melanogaster CG30049-P... 29 4.5
AB035419-1|BAA96093.1| 2263|Drosophila melanogaster Trio protein. 29 4.5
BT023755-1|AAZ41763.1| 974|Drosophila melanogaster RE58921p pro... 29 6.0
AF217844-1|AAF34752.1| 1966|Drosophila melanogaster GRUNGE protein. 29 6.0
AE014298-2125|AAX52496.1| 974|Drosophila melanogaster CG6146-PC... 29 6.0
AE014298-2124|AAF48440.1| 974|Drosophila melanogaster CG6146-PA... 29 6.0
U80064-1|AAC24158.1| 972|Drosophila melanogaster DNA topoisomer... 28 7.9
M74557-1|AAA28951.1| 972|Drosophila melanogaster topoisomerase ... 28 7.9
BT012663-1|AAT08469.1| 1057|Drosophila melanogaster RE66582p pro... 28 7.9
AY122256-1|AAM52768.1| 1153|Drosophila melanogaster SD07343p pro... 28 7.9
AY058488-1|AAL13717.1| 511|Drosophila melanogaster GM14243p pro... 28 7.9
AF475087-1|AAL78679.1| 1985|Drosophila melanogaster transcriptio... 28 7.9
AF429303-1|AAL28097.1| 511|Drosophila melanogaster NUFIP protein. 28 7.9
AE014296-3053|AAF49234.1| 511|Drosophila melanogaster CG4076-PA... 28 7.9
AE014296-1461|AAN12008.1| 1966|Drosophila melanogaster CG6964-PA... 28 7.9
AE014296-1460|AAS65054.1| 1985|Drosophila melanogaster CG6964-PD... 28 7.9
AE014296-1459|AAF50413.2| 1985|Drosophila melanogaster CG6964-PB... 28 7.9
AE014296-1458|AAO41268.1| 1988|Drosophila melanogaster CG6964-PC... 28 7.9
AE014296-1456|AAF50415.2| 1039|Drosophila melanogaster CG7015-PA... 28 7.9
>AF255673-1|AAG18328.1| 1011|Drosophila melanogaster rho guanine
nucleotide exchangefactor 3 protein.
Length = 1011
Score = 32.3 bits (70), Expect = 0.48
Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = -2
Query: 228 GRREPRTPPAGFGPRRSISPAITQRERRSDTPGSMTAPRGPLSATYGRARWKSSKTPPQT 49
G P+T + P SI+P IT + PGS +G W+SSK +T
Sbjct: 172 GNNAPKTKTSPTTPTASIAPMIT--TTTASDPGSEAGDTSSGKYRFGPLIWRSSKERRKT 229
Query: 48 -HPRHAECASG 19
+ R +C SG
Sbjct: 230 KYNRRDKCNSG 240
>AY051816-1|AAK93240.1| 845|Drosophila melanogaster LD32311p
protein.
Length = 845
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = -2
Query: 273 GGPGIPGRNTLQLGEGRREPRTPPAGFGPRRSISPAITQRERRS-DTPGSMTAPRGPLSA 97
G P + G ++ P +PPA PR++ P +++ + P S LS+
Sbjct: 490 GSPSLQGVSSNSESSNHSPPSSPPATKKPRQARQPRVSKTVAATLSIPTSSPLSPSSLSS 549
Query: 96 TYGRARWKSSKTPP 55
TY + + PP
Sbjct: 550 TYSPSASSMASPPP 563
>AJ005441-1|CAA06544.2| 845|Drosophila melanogaster Kruppel homolog
protein.
Length = 845
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = -2
Query: 273 GGPGIPGRNTLQLGEGRREPRTPPAGFGPRRSISPAITQRERRS-DTPGSMTAPRGPLSA 97
G P + G ++ P +PPA PR++ P +++ + P S LS+
Sbjct: 490 GSPSLQGVSSNSESSNHSPPSSPPATKKPRQARQPRVSKTVAATLSIPTSSPLSPSSLSS 549
Query: 96 TYGRARWKSSKTPP 55
TY + + PP
Sbjct: 550 TYSPSASSMASPPP 563
>AJ005440-1|CAA06543.2| 791|Drosophila melanogaster Kruppel homolog
protein.
Length = 791
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = -2
Query: 273 GGPGIPGRNTLQLGEGRREPRTPPAGFGPRRSISPAITQRERRS-DTPGSMTAPRGPLSA 97
G P + G ++ P +PPA PR++ P +++ + P S LS+
Sbjct: 436 GSPSLQGVSSNSESSNHSPPSSPPATKKPRQARQPRVSKTVAATLSIPTSSPLSPSSLSS 495
Query: 96 TYGRARWKSSKTPP 55
TY + + PP
Sbjct: 496 TYSPSASSMASPPP 509
>AE014297-309|AAN13252.1| 1393|Drosophila melanogaster CG31551-PA
protein.
Length = 1393
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/52 (28%), Positives = 34/52 (65%)
Frame = -1
Query: 484 ENKERKKWKI*QNLT*KCNQQYKSEDSKQTKHKEQNNNEDKDRQTQHKLNQK 329
E +E+++ KI + +T + N++ + E++++ KH E+ + ++RQ LN+K
Sbjct: 756 EEREKREKKIKEGITAEGNKRREKEEAER-KHWEKLDRLQRERQEMKHLNKK 806
>AE014134-1049|AAG22417.1| 791|Drosophila melanogaster CG18783-PA,
isoform A protein.
Length = 791
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = -2
Query: 273 GGPGIPGRNTLQLGEGRREPRTPPAGFGPRRSISPAITQRERRS-DTPGSMTAPRGPLSA 97
G P + G ++ P +PPA PR++ P +++ + P S LS+
Sbjct: 436 GSPSLQGVSSNSESSNHSPPSSPPATKKPRQARQPRVSKTVAATLSIPTSSPLSPSSLSS 495
Query: 96 TYGRARWKSSKTPP 55
TY + + PP
Sbjct: 496 TYSPSASSMASPPP 509
>AE014134-1048|AAF52343.2| 845|Drosophila melanogaster CG18783-PB,
isoform B protein.
Length = 845
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = -2
Query: 273 GGPGIPGRNTLQLGEGRREPRTPPAGFGPRRSISPAITQRERRS-DTPGSMTAPRGPLSA 97
G P + G ++ P +PPA PR++ P +++ + P S LS+
Sbjct: 490 GSPSLQGVSSNSESSNHSPPSSPPATKKPRQARQPRVSKTVAATLSIPTSSPLSPSSLSS 549
Query: 96 TYGRARWKSSKTPP 55
TY + + PP
Sbjct: 550 TYSPSASSMASPPP 563
>AE014298-2744|AAF48863.1| 1895|Drosophila melanogaster CG15040-PA
protein.
Length = 1895
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -1
Query: 430 NQQYKSEDSKQT-KHKEQNNNEDKDRQTQHKLNQKY 326
N Q K+++ Q + K QNNN++KD + + K Y
Sbjct: 1855 NMQSKNQNKNQNIQSKNQNNNQNKDNEQKKKTQPSY 1890
>AE014298-1439|AAF46576.2| 313|Drosophila melanogaster CG15307-PA
protein.
Length = 313
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +3
Query: 117 EQSYSQGYRSFSLVVLWRERLSDVDQNQ 200
E+S SQG+ S L + ER SDV+Q Q
Sbjct: 264 ERSLSQGFTSLELDTVLEERCSDVEQTQ 291
>AY070715-1|AAL48186.1| 654|Drosophila melanogaster SD08659p
protein.
Length = 654
Score = 29.5 bits (63), Expect = 3.4
Identities = 26/86 (30%), Positives = 40/86 (46%)
Frame = -3
Query: 323 RKQKDSKNKLKIIRKKSGARVSPEETPFN*VKGAESPEPPLLVLVHVAQSLPP*HNEREG 144
++ K +N L ++ +K G P P VK + E L A+ L N++ G
Sbjct: 142 KELKKRRNWLPLMNRK-GTDKPPSSKPL--VK--KPSEKNLRTPQKHAEELAEQQNQQPG 196
Query: 143 AIPLGV*LLPEARYPPPTDAPGGSPA 66
A P V LP +++P T PGG+ A
Sbjct: 197 ASPATV--LPSSQFPSSTQHPGGAGA 220
>AE014296-168|AAS64926.1| 658|Drosophila melanogaster CG18214-PF,
isoform F protein.
Length = 658
Score = 29.5 bits (63), Expect = 3.4
Identities = 26/86 (30%), Positives = 40/86 (46%)
Frame = -3
Query: 323 RKQKDSKNKLKIIRKKSGARVSPEETPFN*VKGAESPEPPLLVLVHVAQSLPP*HNEREG 144
++ K +N L ++ +K G P P VK + E L A+ L N++ G
Sbjct: 146 KELKKRRNWLPLMNRK-GTDKPPSSKPL--VK--KPSEKNLRTPQKHAEELAEQQNQQPG 200
Query: 143 AIPLGV*LLPEARYPPPTDAPGGSPA 66
A P V LP +++P T PGG+ A
Sbjct: 201 ASPATV--LPSSQFPSSTQHPGGAGA 224
>AE014296-167|AAF47435.3| 658|Drosophila melanogaster CG18214-PB,
isoform B protein.
Length = 658
Score = 29.5 bits (63), Expect = 3.4
Identities = 26/86 (30%), Positives = 40/86 (46%)
Frame = -3
Query: 323 RKQKDSKNKLKIIRKKSGARVSPEETPFN*VKGAESPEPPLLVLVHVAQSLPP*HNEREG 144
++ K +N L ++ +K G P P VK + E L A+ L N++ G
Sbjct: 146 KELKKRRNWLPLMNRK-GTDKPPSSKPL--VK--KPSEKNLRTPQKHAEELAEQQNQQPG 200
Query: 143 AIPLGV*LLPEARYPPPTDAPGGSPA 66
A P V LP +++P T PGG+ A
Sbjct: 201 ASPATV--LPSSQFPSSTQHPGGAGA 224
>BT025932-1|ABG02176.1| 918|Drosophila melanogaster IP13252p
protein.
Length = 918
Score = 29.1 bits (62), Expect = 4.5
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +3
Query: 438 YVRFCYIFHFFLSLFSP 488
YV FCY+F+ FL +F P
Sbjct: 602 YVYFCYLFYIFLVIFFP 618
>AF216663-1|AAF32293.1| 2263|Drosophila melanogaster
guanine-nucleotide-exchange-factorTRIO protein.
Length = 2263
Score = 29.1 bits (62), Expect = 4.5
Identities = 27/92 (29%), Positives = 41/92 (44%)
Frame = -3
Query: 341 IKSKI*RKQKDSKNKLKIIRKKSGARVSPEETPFN*VKGAESPEPPLLVLVHVAQSLPP* 162
+ S R+ +N L ++ +K G P P VK + E L A+ L
Sbjct: 1745 LSSSTKRRGFSGRNWLPLMNRK-GTDKPPSSKPL--VK--KPSEKNLRTPQKHAEELAEQ 1799
Query: 161 HNEREGAIPLGV*LLPEARYPPPTDAPGGSPA 66
N++ GA P V LP +++P T PGG+ A
Sbjct: 1800 QNQQPGASPATV--LPSSQFPSSTQHPGGAGA 1829
>AF215635-1|AAF25952.1| 2263|Drosophila melanogaster Rho family
guanine nucleotideexchange factor Trio protein.
Length = 2263
Score = 29.1 bits (62), Expect = 4.5
Identities = 27/92 (29%), Positives = 41/92 (44%)
Frame = -3
Query: 341 IKSKI*RKQKDSKNKLKIIRKKSGARVSPEETPFN*VKGAESPEPPLLVLVHVAQSLPP* 162
+ S R+ +N L ++ +K G P P VK + E L A+ L
Sbjct: 1745 LSSSTKRRGFSGRNWLPLMNRK-GTDKPPSSKPL--VK--KPSEKNLRTPQKHAEELAEQ 1799
Query: 161 HNEREGAIPLGV*LLPEARYPPPTDAPGGSPA 66
N++ GA P V LP +++P T PGG+ A
Sbjct: 1800 QNQQPGASPATV--LPSSQFPSSTQHPGGAGA 1829
>AE014296-166|AAN11456.1| 804|Drosophila melanogaster CG18214-PD,
isoform D protein.
Length = 804
Score = 29.1 bits (62), Expect = 4.5
Identities = 27/92 (29%), Positives = 41/92 (44%)
Frame = -3
Query: 341 IKSKI*RKQKDSKNKLKIIRKKSGARVSPEETPFN*VKGAESPEPPLLVLVHVAQSLPP* 162
+ S R+ +N L ++ +K G P P VK + E L A+ L
Sbjct: 286 LSSSTKRRGFSGRNWLPLMNRK-GTDKPPSSKPL--VK--KPSEKNLRTPQKHAEELAEQ 340
Query: 161 HNEREGAIPLGV*LLPEARYPPPTDAPGGSPA 66
N++ GA P V LP +++P T PGG+ A
Sbjct: 341 QNQQPGASPATV--LPSSQFPSSTQHPGGAGA 370
>AE014296-165|AAN11455.1| 2263|Drosophila melanogaster CG18214-PC,
isoform C protein.
Length = 2263
Score = 29.1 bits (62), Expect = 4.5
Identities = 27/92 (29%), Positives = 41/92 (44%)
Frame = -3
Query: 341 IKSKI*RKQKDSKNKLKIIRKKSGARVSPEETPFN*VKGAESPEPPLLVLVHVAQSLPP* 162
+ S R+ +N L ++ +K G P P VK + E L A+ L
Sbjct: 1745 LSSSTKRRGFSGRNWLPLMNRK-GTDKPPSSKPL--VK--KPSEKNLRTPQKHAEELAEQ 1799
Query: 161 HNEREGAIPLGV*LLPEARYPPPTDAPGGSPA 66
N++ GA P V LP +++P T PGG+ A
Sbjct: 1800 QNQQPGASPATV--LPSSQFPSSTQHPGGAGA 1829
>AE014296-164|AAF47436.3| 2263|Drosophila melanogaster CG18214-PA,
isoform A protein.
Length = 2263
Score = 29.1 bits (62), Expect = 4.5
Identities = 27/92 (29%), Positives = 41/92 (44%)
Frame = -3
Query: 341 IKSKI*RKQKDSKNKLKIIRKKSGARVSPEETPFN*VKGAESPEPPLLVLVHVAQSLPP* 162
+ S R+ +N L ++ +K G P P VK + E L A+ L
Sbjct: 1745 LSSSTKRRGFSGRNWLPLMNRK-GTDKPPSSKPL--VK--KPSEKNLRTPQKHAEELAEQ 1799
Query: 161 HNEREGAIPLGV*LLPEARYPPPTDAPGGSPA 66
N++ GA P V LP +++P T PGG+ A
Sbjct: 1800 QNQQPGASPATV--LPSSQFPSSTQHPGGAGA 1829
>AE013599-1459|AAM68673.2| 762|Drosophila melanogaster CG30049-PA
protein.
Length = 762
Score = 29.1 bits (62), Expect = 4.5
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +3
Query: 438 YVRFCYIFHFFLSLFSP 488
YV FCY+F+ FL +F P
Sbjct: 446 YVYFCYLFYIFLVIFFP 462
>AB035419-1|BAA96093.1| 2263|Drosophila melanogaster Trio protein.
Length = 2263
Score = 29.1 bits (62), Expect = 4.5
Identities = 27/92 (29%), Positives = 41/92 (44%)
Frame = -3
Query: 341 IKSKI*RKQKDSKNKLKIIRKKSGARVSPEETPFN*VKGAESPEPPLLVLVHVAQSLPP* 162
+ S R+ +N L ++ +K G P P VK + E L A+ L
Sbjct: 1745 LSSSTKRRGFSGRNWLPLMNRK-GTDKPPSSKPL--VK--KPSEKNLRTPQKHAEELAEQ 1799
Query: 161 HNEREGAIPLGV*LLPEARYPPPTDAPGGSPA 66
N++ GA P V LP +++P T PGG+ A
Sbjct: 1800 QNQQPGASPATV--LPSSQFPSSTQHPGGAGA 1829
>BT023755-1|AAZ41763.1| 974|Drosophila melanogaster RE58921p
protein.
Length = 974
Score = 28.7 bits (61), Expect = 6.0
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = -1
Query: 430 NQQYKSEDSKQTKHKEQNNNEDKDRQTQHK 341
+ + S S +KHK + ++ +DR+ +HK
Sbjct: 37 HHHHSSSSSSSSKHKSSSKDKHRDREREHK 66
>AF217844-1|AAF34752.1| 1966|Drosophila melanogaster GRUNGE protein.
Length = 1966
Score = 28.7 bits (61), Expect = 6.0
Identities = 26/90 (28%), Positives = 35/90 (38%)
Frame = -2
Query: 270 GPGIPGRNTLQLGEGRREPRTPPAGFGPRRSISPAITQRERRSDTPGSMTAPRGPLSATY 91
G G+P +T Q + +++ + P G R+ SPA D S P S T
Sbjct: 1113 GHGLPPSHTSQQQQQQQQQQQPGGPAGTVRTSSPAQQPPRSMHDPQSSREPPTSQPSTTM 1172
Query: 90 GRARWKSSKTPPQTHPRHAECASGARPGPG 1
+ PPQ P HA S P PG
Sbjct: 1173 AGSSGPGG-PPPQQSP-HAHRTS---PLPG 1197
>AE014298-2125|AAX52496.1| 974|Drosophila melanogaster CG6146-PC,
isoform C protein.
Length = 974
Score = 28.7 bits (61), Expect = 6.0
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = -1
Query: 430 NQQYKSEDSKQTKHKEQNNNEDKDRQTQHK 341
+ + S S +KHK + ++ +DR+ +HK
Sbjct: 37 HHHHSSSSSSSSKHKSSSKDKHRDREREHK 66
>AE014298-2124|AAF48440.1| 974|Drosophila melanogaster CG6146-PA,
isoform A protein.
Length = 974
Score = 28.7 bits (61), Expect = 6.0
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = -1
Query: 430 NQQYKSEDSKQTKHKEQNNNEDKDRQTQHK 341
+ + S S +KHK + ++ +DR+ +HK
Sbjct: 37 HHHHSSSSSSSSKHKSSSKDKHRDREREHK 66
>U80064-1|AAC24158.1| 972|Drosophila melanogaster DNA topoisomerase
I protein.
Length = 972
Score = 28.3 bits (60), Expect = 7.9
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = -1
Query: 430 NQQYKSEDSKQTKHKEQNNNEDKDRQTQHK 341
+ + S S +KHK + ++ +DR+ +HK
Sbjct: 35 HHHHHSSSSSSSKHKSSSKDKHRDREREHK 64
>M74557-1|AAA28951.1| 972|Drosophila melanogaster topoisomerase I
protein.
Length = 972
Score = 28.3 bits (60), Expect = 7.9
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = -1
Query: 430 NQQYKSEDSKQTKHKEQNNNEDKDRQTQHK 341
+ + S S +KHK + ++ +DR+ +HK
Sbjct: 35 HHHHHSSSSSSSKHKSSSKDKHRDREREHK 64
>BT012663-1|AAT08469.1| 1057|Drosophila melanogaster RE66582p
protein.
Length = 1057
Score = 28.3 bits (60), Expect = 7.9
Identities = 9/33 (27%), Positives = 20/33 (60%)
Frame = -1
Query: 427 QQYKSEDSKQTKHKEQNNNEDKDRQTQHKLNQK 329
QQ+ + +Q +H++Q+ + +Q QH+ Q+
Sbjct: 89 QQHMQQQQQQQQHQQQHQQQQHQQQQQHQQQQQ 121
>AY122256-1|AAM52768.1| 1153|Drosophila melanogaster SD07343p
protein.
Length = 1153
Score = 28.3 bits (60), Expect = 7.9
Identities = 26/90 (28%), Positives = 35/90 (38%)
Frame = -2
Query: 270 GPGIPGRNTLQLGEGRREPRTPPAGFGPRRSISPAITQRERRSDTPGSMTAPRGPLSATY 91
G G+P +T Q + +++ + P G R+ SPA D S P S T
Sbjct: 281 GHGLPPSHTSQQQQQQQQQQQPGGPAGTVRTPSPAQQPPRSMHDPQSSREPPTSQPSTTM 340
Query: 90 GRARWKSSKTPPQTHPRHAECASGARPGPG 1
+ PPQ P HA S P PG
Sbjct: 341 AGSSGPGG-PPPQQSP-HAHRTS---PLPG 365
>AY058488-1|AAL13717.1| 511|Drosophila melanogaster GM14243p
protein.
Length = 511
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = -3
Query: 137 PLGV*LLPEARYPPPTDAPGGS--PAKLPHRRTHGTQSAHRGP 15
P G+ LLP ++ PPP GS PAK H+ S P
Sbjct: 32 PSGMTLLPRSKQPPPMYGARGSTVPAKYLHQEQSSPVSVPASP 74
>AF475087-1|AAL78679.1| 1985|Drosophila melanogaster transcriptional
corepressor Atro protein.
Length = 1985
Score = 28.3 bits (60), Expect = 7.9
Identities = 26/90 (28%), Positives = 35/90 (38%)
Frame = -2
Query: 270 GPGIPGRNTLQLGEGRREPRTPPAGFGPRRSISPAITQRERRSDTPGSMTAPRGPLSATY 91
G G+P +T Q + +++ + P G R+ SPA D S P S T
Sbjct: 1113 GHGLPPSHTSQQQQQQQQQQQPGGPAGTVRTPSPAQQPPRSMHDPQSSREPPTSQPSTTM 1172
Query: 90 GRARWKSSKTPPQTHPRHAECASGARPGPG 1
+ PPQ P HA S P PG
Sbjct: 1173 AGSSGPGG-PPPQQSP-HAHRTS---PLPG 1197
>AF429303-1|AAL28097.1| 511|Drosophila melanogaster NUFIP protein.
Length = 511
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = -3
Query: 137 PLGV*LLPEARYPPPTDAPGGS--PAKLPHRRTHGTQSAHRGP 15
P G+ LLP ++ PPP GS PAK H+ S P
Sbjct: 32 PSGMTLLPRSKQPPPMYGARGSTVPAKYLHQEQSSPVSVPASP 74
>AE014296-3053|AAF49234.1| 511|Drosophila melanogaster CG4076-PA
protein.
Length = 511
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = -3
Query: 137 PLGV*LLPEARYPPPTDAPGGS--PAKLPHRRTHGTQSAHRGP 15
P G+ LLP ++ PPP GS PAK H+ S P
Sbjct: 32 PSGMTLLPRSKQPPPMYGARGSTVPAKYLHQEQSSPVSVPASP 74
>AE014296-1461|AAN12008.1| 1966|Drosophila melanogaster CG6964-PA,
isoform A protein.
Length = 1966
Score = 28.3 bits (60), Expect = 7.9
Identities = 26/90 (28%), Positives = 35/90 (38%)
Frame = -2
Query: 270 GPGIPGRNTLQLGEGRREPRTPPAGFGPRRSISPAITQRERRSDTPGSMTAPRGPLSATY 91
G G+P +T Q + +++ + P G R+ SPA D S P S T
Sbjct: 1113 GHGLPPSHTSQQQQQQQQQQQPGGPAGTVRTPSPAQQPPRSMHDPQSSREPPTSQPSTTM 1172
Query: 90 GRARWKSSKTPPQTHPRHAECASGARPGPG 1
+ PPQ P HA S P PG
Sbjct: 1173 AGSSGPGG-PPPQQSP-HAHRTS---PLPG 1197
>AE014296-1460|AAS65054.1| 1985|Drosophila melanogaster CG6964-PD,
isoform D protein.
Length = 1985
Score = 28.3 bits (60), Expect = 7.9
Identities = 26/90 (28%), Positives = 35/90 (38%)
Frame = -2
Query: 270 GPGIPGRNTLQLGEGRREPRTPPAGFGPRRSISPAITQRERRSDTPGSMTAPRGPLSATY 91
G G+P +T Q + +++ + P G R+ SPA D S P S T
Sbjct: 1113 GHGLPPSHTSQQQQQQQQQQQPGGPAGTVRTPSPAQQPPRSMHDPQSSREPPTSQPSTTM 1172
Query: 90 GRARWKSSKTPPQTHPRHAECASGARPGPG 1
+ PPQ P HA S P PG
Sbjct: 1173 AGSSGPGG-PPPQQSP-HAHRTS---PLPG 1197
>AE014296-1459|AAF50413.2| 1985|Drosophila melanogaster CG6964-PB,
isoform B protein.
Length = 1985
Score = 28.3 bits (60), Expect = 7.9
Identities = 26/90 (28%), Positives = 35/90 (38%)
Frame = -2
Query: 270 GPGIPGRNTLQLGEGRREPRTPPAGFGPRRSISPAITQRERRSDTPGSMTAPRGPLSATY 91
G G+P +T Q + +++ + P G R+ SPA D S P S T
Sbjct: 1113 GHGLPPSHTSQQQQQQQQQQQPGGPAGTVRTPSPAQQPPRSMHDPQSSREPPTSQPSTTM 1172
Query: 90 GRARWKSSKTPPQTHPRHAECASGARPGPG 1
+ PPQ P HA S P PG
Sbjct: 1173 AGSSGPGG-PPPQQSP-HAHRTS---PLPG 1197
>AE014296-1458|AAO41268.1| 1988|Drosophila melanogaster CG6964-PC,
isoform C protein.
Length = 1988
Score = 28.3 bits (60), Expect = 7.9
Identities = 26/90 (28%), Positives = 35/90 (38%)
Frame = -2
Query: 270 GPGIPGRNTLQLGEGRREPRTPPAGFGPRRSISPAITQRERRSDTPGSMTAPRGPLSATY 91
G G+P +T Q + +++ + P G R+ SPA D S P S T
Sbjct: 1113 GHGLPPSHTSQQQQQQQQQQQPGGPAGTVRTPSPAQQPPRSMHDPQSSREPPTSQPSTTM 1172
Query: 90 GRARWKSSKTPPQTHPRHAECASGARPGPG 1
+ PPQ P HA S P PG
Sbjct: 1173 AGSSGPGG-PPPQQSP-HAHRTS---PLPG 1197
>AE014296-1456|AAF50415.2| 1039|Drosophila melanogaster CG7015-PA
protein.
Length = 1039
Score = 28.3 bits (60), Expect = 7.9
Identities = 9/33 (27%), Positives = 20/33 (60%)
Frame = -1
Query: 427 QQYKSEDSKQTKHKEQNNNEDKDRQTQHKLNQK 329
QQ+ + +Q +H++Q+ + +Q QH+ Q+
Sbjct: 89 QQHMQQQQQQQQHQQQHQQQQHQQQQQHQQQQQ 121
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,457,377
Number of Sequences: 53049
Number of extensions: 697165
Number of successful extensions: 3537
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 2982
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3517
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2276053890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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