Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8l01
(727 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0022 + 154399-154428,154528-154716,155469-155619,155724-15... 118 5e-27
01_02_0015 + 10191793-10191957,10192085-10192229,10192331-101924... 116 3e-26
06_03_1341 + 29458085-29458198,29458448-29458526,29458923-294589... 109 2e-24
09_06_0359 + 22508900-22509439 97 1e-20
06_03_1340 + 29455210-29455290,29455493-29455571,29455767-294558... 94 9e-20
02_01_0160 + 1116160-1116678 87 1e-17
03_06_0417 - 33782577-33782687,33782996-33783052,33783110-337832... 86 3e-17
02_01_0782 + 5827364-5827441,5827733-5827787,5828761-5828849,582... 78 6e-15
09_06_0098 + 20850535-20850612,20851258-20851333,20851474-208515... 68 9e-12
02_05_0830 + 32066419-32066676,32067779-32067820,32068375-320688... 67 1e-11
08_02_1578 - 27992848-27992893,27993431-27993515,27994107-279942... 63 2e-10
10_01_0309 + 3417602-3418147 62 4e-10
06_01_0798 - 5944815-5944888,5945084-5945243,5945319-5945356,594... 60 1e-09
06_01_0214 + 1634171-1634173,1634263-1634742 52 4e-07
03_02_0048 - 5265595-5265783,5265882-5265992,5266259-5266547,526... 52 4e-07
08_02_1563 + 27886202-27886446,27886533-27886618,27886942-278870... 49 3e-06
07_01_0566 + 4207894-4207974,4208090-4208144,4208671-4208759,420... 49 3e-06
01_05_0478 - 22587881-22588021,22588126-22588266,22588436-225886... 48 8e-06
06_03_1076 + 27409107-27409204,27409731-27409835,27409915-274100... 38 0.008
06_01_1095 + 8984363-8984789,8985175-8985416,8985500-8985622,898... 29 3.8
10_01_0310 + 3425099-3425218 29 5.0
03_05_1153 + 30787574-30787608,30787982-30788089,30788651-307886... 29 5.0
07_03_0359 - 17201711-17201803,17202185-17202332,17202437-172025... 28 8.7
>05_01_0022 +
154399-154428,154528-154716,155469-155619,155724-155812,
156391-156445,156533-156618,156705-156857
Length = 250
Score = 118 bits (284), Expect = 5e-27
Identities = 62/122 (50%), Positives = 79/122 (64%), Gaps = 5/122 (4%)
Frame = +1
Query: 376 FIASAKSD--EIPKGPKVTHKVSFDMKIGDD---NIGTIVIGLFGKTVPKTTENFFQLAQ 540
F++SA +D E+ K+T+KV FD+ IG+ N+G +VIGL+G VP+T ENF L
Sbjct: 64 FVSSATADPKEVDLQSKITNKVYFDISIGNPVGKNVGRVVIGLYGDDVPQTAENFRALCT 123
Query: 541 KPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMA 720
+G GYKGS FHRVIK+FMIQ +SIYG F+DENFKL H G G +SMA
Sbjct: 124 GEKGFGYKGSSFHRVIKDFMIQGGDFDKGNGTGGKSIYGRTFKDENFKLVHTGPGVVSMA 183
Query: 721 NA 726
NA
Sbjct: 184 NA 185
>01_02_0015 +
10191793-10191957,10192085-10192229,10192331-10192419,
10193009-10193063,10193607-10193692,10194006-10194065
Length = 199
Score = 116 bits (278), Expect = 3e-26
Identities = 57/103 (55%), Positives = 67/103 (65%)
Frame = +1
Query: 418 KVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNF 597
KV K FD+++G + G IVIGLFG+ VPKT +NF L +G GYKG FHR+IK+F
Sbjct: 63 KVNSKCFFDVEVGGEPAGRIVIGLFGEVVPKTVDNFRALCTGDKGYGYKGCSFHRIIKDF 122
Query: 598 MIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANA 726
MIQ RSIYGE F+DENF LKH G G LSMANA
Sbjct: 123 MIQGGDFQNNNGTGGRSIYGECFDDENFTLKHTGPGVLSMANA 165
>06_03_1341 +
29458085-29458198,29458448-29458526,29458923-29458970,
29459064-29459087,29459554-29459736,29459845-29459920,
29460020-29460158
Length = 220
Score = 109 bits (262), Expect = 2e-24
Identities = 61/125 (48%), Positives = 74/125 (59%), Gaps = 7/125 (5%)
Frame = +1
Query: 373 LFIASAKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEG 552
L +A AK + +VTHKV FD++I G +V+GLFGKTVPKT ENF L +G
Sbjct: 34 LALAQAKKSKADL-TEVTHKVYFDVEIDGKPAGRVVMGLFGKTVPKTAENFRALCTGEKG 92
Query: 553 EG-------YKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWL 711
G +KGS FHR+I +FMIQ SIYG +F DENFK+KH G G L
Sbjct: 93 TGKSGKALHFKGSAFHRIIPSFMIQGGDFTLGDGRGGESIYGTKFADENFKIKHTGPGLL 152
Query: 712 SMANA 726
SMANA
Sbjct: 153 SMANA 157
>09_06_0359 + 22508900-22509439
Length = 179
Score = 97.1 bits (231), Expect = 1e-20
Identities = 54/106 (50%), Positives = 61/106 (57%), Gaps = 7/106 (6%)
Frame = +1
Query: 430 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 588
KV FD+ IG G +V+ LF TVPKT ENF L +G G YKGS FHR+I
Sbjct: 7 KVFFDILIGKARAGRVVMELFADTVPKTAENFRCLCTGEKGLGASGKPLHYKGSAFHRII 66
Query: 589 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANA 726
NFM Q SIYG+RF DENFKL+H G G LSMANA
Sbjct: 67 PNFMCQGGDFTRGNGTGGESIYGDRFADENFKLRHTGPGVLSMANA 112
>06_03_1340 +
29455210-29455290,29455493-29455571,29455767-29455814,
29455908-29455931,29456433-29456615,29456730-29456805,
29456937-29457072
Length = 208
Score = 94.3 bits (224), Expect = 9e-20
Identities = 53/109 (48%), Positives = 60/109 (55%), Gaps = 7/109 (6%)
Frame = +1
Query: 418 KVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKF 576
KVT KV FD+ I G IV+GLFG TVPKT ENF + +G G YKG+ F
Sbjct: 37 KVTTKVFFDITINGKPAGRIVMGLFGNTVPKTAENFRAICTGEKGLGKSGKPLSYKGTPF 96
Query: 577 HRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMAN 723
HR+I FMIQ SIYG F DENFK+ H G LSMAN
Sbjct: 97 HRIIPGFMIQGGDTVSGNGTGCDSIYGGMFPDENFKINHSAPGLLSMAN 145
>02_01_0160 + 1116160-1116678
Length = 172
Score = 87.0 bits (206), Expect = 1e-17
Identities = 50/106 (47%), Positives = 57/106 (53%), Gaps = 7/106 (6%)
Frame = +1
Query: 430 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 588
+V FDM +G G IV+ L+ K VP+T ENF L +G G YKGS FHRVI
Sbjct: 5 RVFFDMTVGGAPAGRIVMELYAKDVPRTAENFRALCTGEKGVGKSGKPLHYKGSTFHRVI 64
Query: 589 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANA 726
FM Q SIYGE+F DE FK KH G LSMANA
Sbjct: 65 PEFMCQGGDFTRGNGTGGESIYGEKFADEVFKFKHDSPGILSMANA 110
>03_06_0417 -
33782577-33782687,33782996-33783052,33783110-33783205,
33783252-33783284,33783543-33783599,33783968-33784060,
33784308-33784395,33784812-33784835,33784956-33785164
Length = 255
Score = 85.8 bits (203), Expect = 3e-17
Identities = 51/112 (45%), Positives = 60/112 (53%), Gaps = 5/112 (4%)
Frame = +1
Query: 406 PKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLA---QKPEG--EGYKGS 570
P PK V FD+ IG G I + LF VPKT ENF Q + G +GYKG
Sbjct: 31 PPNPK-NPVVFFDVTIGSIPAGRIKMELFADIVPKTAENFRQFCTGEHRKSGLPQGYKGC 89
Query: 571 KFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANA 726
+FHRVIK+FMIQ SIYG +F+DENF KH G G LSM +
Sbjct: 90 QFHRVIKDFMIQGGDYMKGDGTGCTSIYGTKFDDENFIAKHTGPGLLSMVRS 141
>02_01_0782 +
5827364-5827441,5827733-5827787,5828761-5828849,
5829167-5829191,5829645-5829683,5830316-5830433,
5830857-5831023,5831155-5831518,5831589-5831701,
5832185-5832310,5832436-5833339,5833694-5834036
Length = 806
Score = 78.2 bits (184), Expect = 6e-15
Identities = 48/106 (45%), Positives = 53/106 (50%), Gaps = 8/106 (7%)
Frame = +1
Query: 433 VSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG--------YKGSKFHRVI 588
V D+ IGD+ +V LF P+T ENF L G G YKGS FHRVI
Sbjct: 9 VFMDVSIGDEPDERMVFELFADVAPRTAENFRALCTGEMGIGQTSKKPLYYKGSLFHRVI 68
Query: 589 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANA 726
K FM Q SIYG FEDENF L+H G LSMANA
Sbjct: 69 KGFMAQGGDFSNGDGSGGESIYGGTFEDENFVLRHDERGLLSMANA 114
>09_06_0098 +
20850535-20850612,20851258-20851333,20851474-20851521,
20851758-20851781,20851875-20851994,20852235-20852310,
20852385-20852547
Length = 194
Score = 67.7 bits (158), Expect = 9e-12
Identities = 36/71 (50%), Positives = 44/71 (61%), Gaps = 7/71 (9%)
Frame = +1
Query: 415 PKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSK 573
P VT++V D++I +IG IVIGL+G VPKT NF L EG G YKGS+
Sbjct: 34 PAVTNRVYLDVEIDGQHIGRIVIGLYGDVVPKTVANFRALCTGEEGIGHKGKSLHYKGSR 93
Query: 574 FHRVIKNFMIQ 606
FHR+I FMIQ
Sbjct: 94 FHRIIPGFMIQ 104
>02_05_0830 +
32066419-32066676,32067779-32067820,32068375-32068875,
32069048-32069135,32069251-32069303,32069499-32069603,
32069886-32069961,32070038-32070075,32070162-32070242,
32070353-32070364
Length = 417
Score = 67.3 bits (157), Expect = 1e-11
Identities = 51/150 (34%), Positives = 63/150 (42%), Gaps = 22/150 (14%)
Frame = +1
Query: 343 GTLTMALGILLFIASAKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTEN 522
GT T A +A+ K +E + D+ IG D G IV+ L+ P+T EN
Sbjct: 7 GTTTAAAAAA--VAAGKEEEAEVVVVRNPRCYLDVSIGGDMEGRIVVELYASVAPRTAEN 64
Query: 523 FFQLAQKPEGEGY----------------------KGSKFHRVIKNFMIQXXXXXXXXXX 636
F L +G KGS HR++K FM+Q
Sbjct: 65 FRALCTGEKGVSAATGVPLHYKISLKAASVCTRWTKGSCIHRIVKGFMVQGGDITAGDGT 124
Query: 637 XXRSIYGERFEDENFKLKHYGAGWLSMANA 726
SIYG FEDENF LKH G LSMANA
Sbjct: 125 GGESIYGLNFEDENFVLKHERKGMLSMANA 154
>08_02_1578 -
27992848-27992893,27993431-27993515,27994107-27994240,
27994579-27994640,27994736-27994831,27994952-27995023
Length = 164
Score = 62.9 bits (146), Expect = 2e-10
Identities = 37/91 (40%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Frame = +1
Query: 457 DDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXX 636
+ ++G I ++ K PKT NF +L+++ Y FHR+IK+F++Q
Sbjct: 15 ETSMGAFTIEMYYKHAPKTCRNFLELSRRGY---YDNVIFHRIIKDFIVQGGDPTGTGRG 71
Query: 637 XXRSIYGERFEDE-NFKLKHYGAGWLSMANA 726
SIYG +FEDE +LKH GAG LSMANA
Sbjct: 72 G-ESIYGAKFEDEIRPELKHTGAGILSMANA 101
>10_01_0309 + 3417602-3418147
Length = 181
Score = 62.1 bits (144), Expect = 4e-10
Identities = 42/113 (37%), Positives = 53/113 (46%), Gaps = 10/113 (8%)
Frame = +1
Query: 418 KVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLA--QKPEGEG-----YKGSKF 576
K +V D+ IG + +G +VI L VP T ENF +L ++ G YKGS F
Sbjct: 8 KSNPRVFLDIAIGGEWVGRVVIELLADKVPDTAENFRRLCTGERAGRSGKSRLHYKGSAF 67
Query: 577 HRVIKNFMIQXXXXXXXXXXXXRSIY---GERFEDENFKLKHYGAGWLSMANA 726
HRV+ FM Q S F DE F +KH G G +SMANA
Sbjct: 68 HRVVPGFMCQGGDITAGNGTGGESALDGAARHFPDEGFAVKHDGPGVVSMANA 120
>06_01_0798 -
5944815-5944888,5945084-5945243,5945319-5945356,
5945438-5945513,5946114-5946218,5947486-5947986,
5948638-5948710,5949550-5949593,5949938-5950174
Length = 435
Score = 60.5 bits (140), Expect = 1e-09
Identities = 30/55 (54%), Positives = 34/55 (61%)
Frame = +1
Query: 562 KGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANA 726
+GS FHRVIK FM+Q SIYG +FEDENF LKH G LSMAN+
Sbjct: 118 QGSCFHRVIKGFMVQGGDITAGDGTGGESIYGLKFEDENFVLKHERKGMLSMANS 172
Score = 36.7 bits (81), Expect = 0.019
Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +1
Query: 379 IASAKSDEIP-KGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGE 555
+ASA + E+ K P+ D+ IG + G IVI L+ VP+T ENF L +G
Sbjct: 13 VASAAAAEVEVKNPRCF----MDVSIGGEIEGRIVIELYASVVPRTAENFRALCTGEKGV 68
Query: 556 GYKGSKFHRVIKNF 597
G K H K+F
Sbjct: 69 GAVTGK-HLHYKDF 81
>06_01_0214 + 1634171-1634173,1634263-1634742
Length = 160
Score = 52.4 bits (120), Expect = 4e-07
Identities = 35/89 (39%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Frame = +1
Query: 463 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 642
N+G I +F P+T ENF L Y G+ FHR IK FMIQ
Sbjct: 8 NLGDIKCEVFCDQAPRTAENFLALCASGY---YDGTIFHRNIKGFMIQ-GGDPTGTGKGG 63
Query: 643 RSIYGERFEDE-NFKLKHYGAGWLSMANA 726
SI+G++F DE LKH G +SMAN+
Sbjct: 64 TSIWGKKFADEFRESLKHNARGVMSMANS 92
>03_02_0048 -
5265595-5265783,5265882-5265992,5266259-5266547,
5266647-5266903,5266995-5267356,5267447-5267522,
5267618-5267707,5267800-5267891,5267995-5268098,
5268191-5268253,5268609-5268736
Length = 586
Score = 52.4 bits (120), Expect = 4e-07
Identities = 42/110 (38%), Positives = 51/110 (46%), Gaps = 1/110 (0%)
Frame = +1
Query: 400 EIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFH 579
++ K PK V GD N+ L P+T ENF E Y G FH
Sbjct: 336 KVEKNPKKKGYVQLHTTHGDLNLE-----LHCDITPRTCENFLTHC---ENGYYNGLIFH 387
Query: 580 RVIKNFMIQXXXXXXXXXXXXRSIYGERFEDE-NFKLKHYGAGWLSMANA 726
R IKNFMIQ SI+G+ F+DE N KL H G G +SMAN+
Sbjct: 388 RSIKNFMIQ-GGDPTGTGSGGESIWGKPFKDELNSKLIHSGRGVVSMANS 436
>08_02_1563 +
27886202-27886446,27886533-27886618,27886942-27887030,
27887193-27887432,27887527-27887648,27888103-27888178,
27888276-27888383,27888465-27888641,27888959-27889176,
27889313-27889445,27889584-27889807,27890052-27890205,
27890297-27890380
Length = 651
Score = 49.2 bits (112), Expect = 3e-06
Identities = 36/89 (40%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Frame = +1
Query: 463 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 642
++G I + L+ + PKT ENF + Y FHRVIK FMIQ
Sbjct: 503 SMGDIHLRLYPEECPKTVENFTTHCRNGY---YDNLIFHRVIKGFMIQ-TGDPLGDGTGG 558
Query: 643 RSIYGERFEDENFK-LKHYGAGWLSMANA 726
+SI+G FEDE K L+H LSMANA
Sbjct: 559 QSIWGREFEDEFHKSLRHDRPFTLSMANA 587
>07_01_0566 +
4207894-4207974,4208090-4208144,4208671-4208759,
4209742-4209794,4209966-4210120,4210201-4210528,
4210618-4210730,4211394-4211538,4211951-4212259,
4212340-4212420,4212989-4213349
Length = 589
Score = 49.2 bits (112), Expect = 3e-06
Identities = 31/76 (40%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Frame = +1
Query: 403 IPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------- 558
+PK K H V FD+ IG I LF VPKTTENF L G G
Sbjct: 1 MPKAKKNPH-VFFDIAIGGRAAERITFELFADVVPKTTENFRALCTGERGLGVSTQKPLY 59
Query: 559 YKGSKFHRVIKNFMIQ 606
+KG+ HR++K FM Q
Sbjct: 60 FKGTNMHRILKGFMAQ 75
>01_05_0478 -
22587881-22588021,22588126-22588266,22588436-22588643,
22589199-22589238,22589425-22589647,22590826-22590970,
22591053-22591156,22591298-22591396,22591506-22591684,
22591948-22592167
Length = 499
Score = 48.0 bits (109), Expect = 8e-06
Identities = 34/87 (39%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Frame = +1
Query: 469 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRS 648
G + I L+ K PK NF QL EG Y G+ FHRVIK+F++Q S
Sbjct: 22 GPLDIELWPKEAPKAVRNFVQLCL--EGY-YDGTLFHRVIKSFLVQ-GGDPTGSGTGGES 77
Query: 649 IYGERFEDE-NFKLKHYGAGWLSMANA 726
IYG F DE + +L+ G ++ ANA
Sbjct: 78 IYGAPFADEFHTRLRFNHRGLVACANA 104
>06_03_1076 +
27409107-27409204,27409731-27409835,27409915-27410032,
27410180-27410230,27410328-27410419,27410558-27410657,
27411018-27411137,27411227-27411295,27411468-27411514,
27411597-27411652,27412293-27412333,27412570-27412675,
27413891-27414023,27414096-27414645
Length = 561
Score = 37.9 bits (84), Expect = 0.008
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 7/95 (7%)
Frame = +1
Query: 463 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ---XXXXXXXXX 633
++G I + L P TT+NF +L + + Y G FH+V K+F+ Q
Sbjct: 8 SVGDIEVDLHTDMCPLTTKNFLKLCKM---KYYNGCLFHKVEKDFLAQTGDPTGTGAGGD 64
Query: 634 XXXRSIYGE--RFEDENFK--LKHYGAGWLSMANA 726
+ +YG+ RF D+ + L+H G ++MA+A
Sbjct: 65 SVYKFLYGDQARFFDDEIRPDLRHSKKGTIAMASA 99
>06_01_1095 +
8984363-8984789,8985175-8985416,8985500-8985622,
8985783-8985899,8986258-8986399,8986587-8986627,
8987194-8987453,8987505-8987607,8987698-8987776,
8987856-8988115
Length = 597
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = -2
Query: 678 VFIFKTFTIYTAPSSSITLGKITTLDHEIFN---YSVELAPFVPLPLRFLS 535
V + TI A + S+ T LD ++FN +++ PFVPL L+ L+
Sbjct: 132 VVLLNLVTIVFASNISVVKEAETMLDPDLFNVLRFTISAIPFVPLLLKALN 182
>10_01_0310 + 3425099-3425218
Length = 39
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 469 GTIVIGLFGKTVPKTTENF 525
G++VI F VPKTTENF
Sbjct: 8 GSVVIEQFADKVPKTTENF 26
>03_05_1153 +
30787574-30787608,30787982-30788089,30788651-30788689,
30789181-30789184,30789496-30789580,30789609-30790321
Length = 327
Score = 28.7 bits (61), Expect = 5.0
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +3
Query: 12 LTRITMTRSDWCYWSLI 62
LTRI ++R WC+W L+
Sbjct: 86 LTRIRVSRIKWCFWQLL 102
>07_03_0359 -
17201711-17201803,17202185-17202332,17202437-17202574,
17204331-17204416,17205233-17205283,17205774-17205858,
17205930-17206081
Length = 250
Score = 27.9 bits (59), Expect = 8.7
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +1
Query: 469 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 606
G+I I ++ + F L + +KG F VIKNF+IQ
Sbjct: 103 GSITIEIYKDASADVVDRFVSLCKSNH---FKGMPFRHVIKNFVIQ 145
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,052,915
Number of Sequences: 37544
Number of extensions: 312044
Number of successful extensions: 545
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 528
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1898162308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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