Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8k18
         (697 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       29   0.027
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    29   0.027
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    29   0.027
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    26   0.26 
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    26   0.26 
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    25   0.45 
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    25   0.78 
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    22   4.2  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    22   4.2  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   7.3  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   9.6  

>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 29.5 bits (63), Expect = 0.027
 Identities = 30/126 (23%), Positives = 52/126 (41%), Gaps = 4/126 (3%)
 Frame = +3

Query: 255 RKAMEAY-RFDSSALERAASAAKELERSRHAKDALELSKLQESTR---QQEQMAKIKEYE 422
           R+  + Y RF +  LE+       L R R  + A  L   +   +   Q  +M   KE  
Sbjct: 7   RRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELR 66

Query: 423 AAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILR 602
           A  E  +  +++ + +ER K  Q+E KQ ++  Q    + +  ++   +   KS    L 
Sbjct: 67  AVKEINEQARREREEQERHKQQQQE-KQQKIEQQTHSSIHQHHHDPMKMSLDKSGGSDLL 125

Query: 603 KQEESV 620
           K    V
Sbjct: 126 KAVSKV 131


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 29.5 bits (63), Expect = 0.027
 Identities = 30/126 (23%), Positives = 52/126 (41%), Gaps = 4/126 (3%)
 Frame = +3

Query: 255 RKAMEAY-RFDSSALERAASAAKELERSRHAKDALELSKLQESTR---QQEQMAKIKEYE 422
           R+  + Y RF +  LE+       L R R  + A  L   +   +   Q  +M   KE  
Sbjct: 158 RRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELR 217

Query: 423 AAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILR 602
           A  E  +  +++ + +ER K  Q+E KQ ++  Q    + +  ++   +   KS    L 
Sbjct: 218 AVKEINEQARREREEQERHKQQQQE-KQQKIEQQTHSSIHQHHHDPMKMSLDKSGGSDLL 276

Query: 603 KQEESV 620
           K    V
Sbjct: 277 KAVSKV 282


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 29.5 bits (63), Expect = 0.027
 Identities = 30/126 (23%), Positives = 52/126 (41%), Gaps = 4/126 (3%)
 Frame = +3

Query: 255 RKAMEAY-RFDSSALERAASAAKELERSRHAKDALELSKLQESTR---QQEQMAKIKEYE 422
           R+  + Y RF +  LE+       L R R  + A  L   +   +   Q  +M   KE  
Sbjct: 217 RRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELR 276

Query: 423 AAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILR 602
           A  E  +  +++ + +ER K  Q+E KQ ++  Q    + +  ++   +   KS    L 
Sbjct: 277 AVKEINEQARREREEQERHKQQQQE-KQQKIEQQTHSSIHQHHHDPMKMSLDKSGGSDLL 335

Query: 603 KQEESV 620
           K    V
Sbjct: 336 KAVSKV 341


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 26/114 (22%), Positives = 50/114 (43%), Gaps = 1/114 (0%)
 Frame = +3

Query: 237 NLSKSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKE 416
           N  K  +   + +  D  ALE+ A + KE   +   +  LE +   E     E      +
Sbjct: 151 NRVKYNQNYSKVFGNDEKALEQIAKSEKEPSLTDLVQRWLERTPGLEL----EGFNFWGK 206

Query: 417 YEAAIEQAKVEQKKVDYEERRKTLQE-ETKQHQMRAQYQDQLAKKRYEEQLVQQ 575
           Y+ A+E+   EQK++  +E  +TL+  +    + R +  + + K    E L+ +
Sbjct: 207 YQKAVEKLLTEQKELAEKEEAETLKRYKLNDLEKRREVYESIFKVEVHEALMSR 260


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 26/114 (22%), Positives = 50/114 (43%), Gaps = 1/114 (0%)
 Frame = +3

Query: 237 NLSKSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKE 416
           N  K  +   + +  D  ALE+ A + KE   +   +  LE +   E     E      +
Sbjct: 151 NRVKYNQNYSKVFGNDEKALEQIAKSEKEPSLTDLVQRWLERTPGLEL----EGFNFWGK 206

Query: 417 YEAAIEQAKVEQKKVDYEERRKTLQE-ETKQHQMRAQYQDQLAKKRYEEQLVQQ 575
           Y+ A+E+   EQK++  +E  +TL+  +    + R +  + + K    E L+ +
Sbjct: 207 YQKAVEKLLTEQKELAEKEEAETLKRYKLNDLEKRREVYESIFKVEVHEALMSR 260


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 25.4 bits (53), Expect = 0.45
 Identities = 13/55 (23%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
 Frame = +3

Query: 414 EYEAAIEQAKVEQKKVDYEERRKTLQE-ETKQHQMRAQYQDQLAKKRYEEQLVQQ 575
           +Y+ A+E+   EQK++  +E  +TL+  +    + R +  + + K    E L+ +
Sbjct: 46  KYQKAVEKLLTEQKELAEKEEAETLKRYKLNDLEKRREVYESIFKVEVHEALMSR 100


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 24.6 bits (51), Expect = 0.78
 Identities = 14/63 (22%), Positives = 34/63 (53%)
 Frame = +3

Query: 444 VEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVA 623
           +++ + ++ E  K ++E  K+H     Y  +L  ++  E+ +   +++EE  +K+EE   
Sbjct: 183 MKEDQTEFLEEHK-IKEIVKKHSQFIGYPIKLVVEKEREKELSDDEAEEE--KKEEEGED 239

Query: 624 KQE 632
           K +
Sbjct: 240 KDK 242


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = +1

Query: 367 NFRKVLDNRSKWPRLR 414
           N+RKV D + ++P+L+
Sbjct: 85  NYRKVTDLKKRFPKLK 100


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 145 RGYLGTVQNLHNLLLRTIHQP 207
           R Y G   N+ ++L+  IH P
Sbjct: 356 RNYYGDFHNMGHILIGYIHDP 376


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = -3

Query: 632 FLFCYTLFLFS 600
           F+FCY ++LF+
Sbjct: 145 FVFCYFIYLFT 155


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/48 (20%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = +1

Query: 88  SYESSLLTQLE-NYLLKSRCRGYLGTVQNLHNLLLRTIHQPMGLVLPH 228
           +Y  +   Q++ +YL     + ++  + N+      T +  MG+  PH
Sbjct: 304 NYAPTYYGQMQPDYLNSQTTQNHMQAMNNMAGTYQMTGYSAMGMAAPH 351


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,439
Number of Sequences: 336
Number of extensions: 2219
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)