Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8k10
         (745 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    21   7.9  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   7.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.9  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   7.9  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.9  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   7.9  

>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -2

Query: 267 RFRSIHLWFV 238
           RFR++ LWFV
Sbjct: 354 RFRALKLWFV 363


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +1

Query: 154 DISAPKGRGRGWQMNNQA 207
           +I AP   G GWQ    A
Sbjct: 303 EIDAPSHAGNGWQWGPDA 320


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -1

Query: 718 GTRGIQTPQVAPLNRTLNTNEL 653
           G  G++ P ++ +NR L  NEL
Sbjct: 522 GVCGMKWPLLSTINRHLRGNEL 543


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -2

Query: 213  LACLVVHLPPP 181
            L CL V LPPP
Sbjct: 1326 LPCLAVGLPPP 1336


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 416  IWMTCLIHLKKLKTWIYG 469
            IW+  LIH KK+  ++ G
Sbjct: 1172 IWICSLIHRKKIVKFLDG 1189


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +2

Query: 248 RWILLNRSYQQMLKNGTLQITLLKPYPLTTLNL 346
           +W LLN ++QQ+ K    +   +K Y    L L
Sbjct: 103 KWRLLNNNFQQIDKIFKTRDDRVKVYQAPVLQL 135


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,233
Number of Sequences: 336
Number of extensions: 4562
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19819879
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)