Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8k10
(745 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF013758-1|AAC39697.2| 479|Homo sapiens polyadenylate binding p... 48 4e-08
BC005295-1|AAH05295.1| 400|Homo sapiens poly(A) binding protein... 48 4e-08
BC015937-1|AAH15937.1| 479|Homo sapiens poly(A) binding protein... 45 4e-07
M83566-1|AAA35629.1| 2181|Homo sapiens calcium channel alpha-1 s... 31 4.4
M76558-1|AAA58402.1| 2161|Homo sapiens calcium channel alpha-1D ... 31 4.4
D43747-1|BAA07804.1| 2170|Homo sapiens voltage-dependent calcium... 31 4.4
AK097139-1|BAC04960.1| 138|Homo sapiens protein ( Homo sapiens ... 31 4.4
AB209171-1|BAD92408.1| 1854|Homo sapiens calcium channel, voltag... 31 4.4
X95808-1|CAA65075.1| 1358|Homo sapiens DXS6673E protein. 31 5.8
BT007095-1|AAP35759.1| 495|Homo sapiens zinc finger protein 261... 31 5.8
BC069057-1|AAH69057.1| 1370|Homo sapiens zinc finger, MYM-type 3... 31 5.8
BC013009-1|AAH13009.1| 495|Homo sapiens ZMYM3 protein protein. 31 5.8
AL133380-4|CAI23046.1| 1036|Homo sapiens mixed lineage kinase 4 ... 31 5.8
AL133380-3|CAI23045.1| 570|Homo sapiens mixed lineage kinase 4 ... 31 5.8
AJ311798-1|CAC84640.1| 1036|Homo sapiens mixed lineage kinase 4b... 31 5.8
AJ311797-1|CAC84639.1| 570|Homo sapiens mixed lineage kinase 4a... 31 5.8
AB002383-1|BAA20839.2| 1380|Homo sapiens KIAA0385 protein. 31 5.8
BX640951-1|CAE45975.1| 370|Homo sapiens hypothetical protein pr... 30 7.6
BC100790-1|AAI00791.1| 284|Homo sapiens ADAMTSL1 protein protein. 30 7.6
BC100788-1|AAI00789.1| 467|Homo sapiens ADAMTSL1 protein protein. 30 7.6
BC064404-1|AAH64404.1| 719|Homo sapiens nucleolar protein 11 pr... 30 7.6
BC001726-1|AAH01726.2| 408|Homo sapiens NOL11 protein protein. 30 7.6
AY598333-1|AAT06744.1| 719|Homo sapiens L14 protein. 30 7.6
AL591423-1|CAM13086.1| 1263|Homo sapiens ADAMTS-like 1 protein. 30 7.6
AL353895-2|CAM20931.1| 1263|Homo sapiens ADAMTS-like 1 protein. 30 7.6
AL158150-6|CAM14352.1| 1263|Homo sapiens ADAMTS-like 1 protein. 30 7.6
AL158150-3|CAO03592.1| 463|Homo sapiens ADAMTS-like 1 protein. 30 7.6
AL158150-1|CAO03591.1| 258|Homo sapiens ADAMTS-like 1 protein. 30 7.6
AK092602-1|BAC03925.1| 262|Homo sapiens protein ( Homo sapiens ... 30 7.6
AK023702-1|BAB14647.1| 719|Homo sapiens protein ( Homo sapiens ... 30 7.6
>AF013758-1|AAC39697.2| 479|Homo sapiens polyadenylate binding
protein-interacting protein-1 protein.
Length = 479
Score = 48.4 bits (110), Expect(2) = 4e-08
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Frame = +1
Query: 505 ITFDPGKFDTLCGPLVDSFASTLNDESYTRPLVDAIVNQSIGEANFRYNGARLCS--MYD 678
+T PG F+T ++ + + + LV+ I Q+ NF Y GARLC+ +
Sbjct: 169 LTEQPGSFETEIEQFAETLNGCVTTDDALQELVELIYQQATSIPNFSYMGARLCNYLSHH 228
Query: 679 SVAQPEESVFRECLLERCSVE 741
P+ FR+ LL+RC E
Sbjct: 229 LTISPQSGNFRQLLLQRCRTE 249
Score = 29.1 bits (62), Expect(2) = 4e-08
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +1
Query: 265 SKLSADAKEWYPANYTSQALPAYNTEPAPYRPSRPSVQGRLRQAQDQ 405
SKLS +A E+YP+ Y+S +Y Y VQ L +Q
Sbjct: 126 SKLSVNAPEFYPSGYSSSYTESYEDGCEDYPTLSEYVQDFLNHLTEQ 172
>BC005295-1|AAH05295.1| 400|Homo sapiens poly(A) binding protein
interacting protein 1 protein.
Length = 400
Score = 48.4 bits (110), Expect(2) = 4e-08
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Frame = +1
Query: 505 ITFDPGKFDTLCGPLVDSFASTLNDESYTRPLVDAIVNQSIGEANFRYNGARLCS--MYD 678
+T PG F+T ++ + + + LV+ I Q+ NF Y GARLC+ +
Sbjct: 90 LTEQPGSFETEIEQFAETLNGCVTTDDALQELVELIYQQATSIPNFSYMGARLCNYLSHH 149
Query: 679 SVAQPEESVFRECLLERCSVE 741
P+ FR+ LL+RC E
Sbjct: 150 LTISPQSGNFRQLLLQRCRTE 170
Score = 29.1 bits (62), Expect(2) = 4e-08
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +1
Query: 265 SKLSADAKEWYPANYTSQALPAYNTEPAPYRPSRPSVQGRLRQAQDQ 405
SKLS +A E+YP+ Y+S +Y Y VQ L +Q
Sbjct: 47 SKLSVNAPEFYPSGYSSSYTESYEDGCEDYPTLSEYVQDFLNHLTEQ 93
>BC015937-1|AAH15937.1| 479|Homo sapiens poly(A) binding protein
interacting protein 1 protein.
Length = 479
Score = 45.2 bits (102), Expect(2) = 4e-07
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +1
Query: 505 ITFDPGKFDTLCGPLVDSFASTLNDESYTRPLVDAIVNQSIGEANFRYNGARLCS--MYD 678
+T PG F+T ++ + + + LV+ I Q+ NF Y GARLC+ +
Sbjct: 169 LTEQPGSFETEIEQFAETLNGCVTTDDALQELVELIYQQATSIPNFSYMGARLCNYLSHH 228
Query: 679 SVAQPEESVFRECLLERCSVE 741
P+ F + LL+RC E
Sbjct: 229 LTISPQSGNFCQLLLQRCRTE 249
Score = 29.1 bits (62), Expect(2) = 4e-07
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +1
Query: 265 SKLSADAKEWYPANYTSQALPAYNTEPAPYRPSRPSVQGRLRQAQDQ 405
SKLS +A E+YP+ Y+S +Y Y VQ L +Q
Sbjct: 126 SKLSVNAPEFYPSGYSSSYTESYEDGCEDYPTLSEYVQDFLNHLTEQ 172
>M83566-1|AAA35629.1| 2181|Homo sapiens calcium channel alpha-1
subunit protein.
Length = 2181
Score = 31.1 bits (67), Expect = 4.4
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +1
Query: 70 IYQSRLWNCIKAAL*NC--CRGLIVKMNNGDISAPKGRGRGWQ 192
+++ + + C A N CRGL + +GD+ +P R R WQ
Sbjct: 1056 LFKGKFYRCTDEAKSNPEECRGLFILYKDGDVDSPVVRERIWQ 1098
>M76558-1|AAA58402.1| 2161|Homo sapiens calcium channel alpha-1D
subunit protein.
Length = 2161
Score = 31.1 bits (67), Expect = 4.4
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +1
Query: 70 IYQSRLWNCIKAAL*NC--CRGLIVKMNNGDISAPKGRGRGWQ 192
+++ + + C A N CRGL + +GD+ +P R R WQ
Sbjct: 1036 LFKGKFYRCTDEAKSNPEECRGLFILYKDGDVDSPVVRERIWQ 1078
>D43747-1|BAA07804.1| 2170|Homo sapiens voltage-dependent calcium
channel alpha1 subunit, CACN4 protein.
Length = 2170
Score = 31.1 bits (67), Expect = 4.4
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +1
Query: 70 IYQSRLWNCIKAAL*NC--CRGLIVKMNNGDISAPKGRGRGWQ 192
+++ + + C A N CRGL + +GD+ +P R R WQ
Sbjct: 1047 LFKGKFYRCTDEAKSNPEECRGLFILYKDGDVDSPVVRERIWQ 1089
>AK097139-1|BAC04960.1| 138|Homo sapiens protein ( Homo sapiens
cDNA FLJ39820 fis, clone SPLEN2010625. ).
Length = 138
Score = 31.1 bits (67), Expect = 4.4
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +2
Query: 299 LQITLLKPYPLTTLNLPHIDHLAPLYKV 382
L +TLL P+ L TL LPH PL +V
Sbjct: 65 LSLTLLSPFSLPTLFLPHFPPRVPLLRV 92
>AB209171-1|BAD92408.1| 1854|Homo sapiens calcium channel,
voltage-dependent, L type, alpha 1D subunit variant
protein.
Length = 1854
Score = 31.1 bits (67), Expect = 4.4
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +1
Query: 70 IYQSRLWNCIKAAL*NC--CRGLIVKMNNGDISAPKGRGRGWQ 192
+++ + + C A N CRGL + +GD+ +P R R WQ
Sbjct: 729 LFKGKFYRCTDEAKSNPEECRGLFILYKDGDVDSPVVRERIWQ 771
>X95808-1|CAA65075.1| 1358|Homo sapiens DXS6673E protein.
Length = 1358
Score = 30.7 bits (66), Expect = 5.8
Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Frame = -1
Query: 568 LKQMNPPRDHTRCQTCP--GQRLSHT*QLSSL--LCSPVDPCFQLLQVNKTCHPNCMD 407
+ Q P D TRC C G+ L S + LCS D CF + NK NC D
Sbjct: 397 IPQSGDPADATRCSICQKTGEVLHEVSNGSVVHRLCS--DSCFSKFRANKGLKTNCCD 452
>BT007095-1|AAP35759.1| 495|Homo sapiens zinc finger protein 261
protein.
Length = 495
Score = 30.7 bits (66), Expect = 5.8
Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Frame = -1
Query: 568 LKQMNPPRDHTRCQTCP--GQRLSHT*QLSSL--LCSPVDPCFQLLQVNKTCHPNCMD 407
+ Q P D TRC C G+ L S + LCS D CF + NK NC D
Sbjct: 397 IPQSGDPADATRCSICQKTGEVLHEVSNGSVVHRLCS--DSCFSKFRANKGLKTNCCD 452
>BC069057-1|AAH69057.1| 1370|Homo sapiens zinc finger, MYM-type 3
protein.
Length = 1370
Score = 30.7 bits (66), Expect = 5.8
Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Frame = -1
Query: 568 LKQMNPPRDHTRCQTCP--GQRLSHT*QLSSL--LCSPVDPCFQLLQVNKTCHPNCMD 407
+ Q P D TRC C G+ L S + LCS D CF + NK NC D
Sbjct: 397 IPQSGDPADATRCSICQKTGEVLHEVSNGSVVHRLCS--DSCFSKFRANKGLKTNCCD 452
>BC013009-1|AAH13009.1| 495|Homo sapiens ZMYM3 protein protein.
Length = 495
Score = 30.7 bits (66), Expect = 5.8
Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Frame = -1
Query: 568 LKQMNPPRDHTRCQTCP--GQRLSHT*QLSSL--LCSPVDPCFQLLQVNKTCHPNCMD 407
+ Q P D TRC C G+ L S + LCS D CF + NK NC D
Sbjct: 397 IPQSGDPADATRCSICQKTGEVLHEVSNGSVVHRLCS--DSCFSKFRANKGLKTNCCD 452
>AL133380-4|CAI23046.1| 1036|Homo sapiens mixed lineage kinase 4
(KIAA1804) protein.
Length = 1036
Score = 30.7 bits (66), Expect = 5.8
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 295 YPANYTSQALPAYNTEPAPYRPSRP 369
+PANY + PA + P P RPS P
Sbjct: 92 FPANYVAPCRPAASPAPPPSRPSSP 116
>AL133380-3|CAI23045.1| 570|Homo sapiens mixed lineage kinase 4
(KIAA1804) protein.
Length = 570
Score = 30.7 bits (66), Expect = 5.8
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 295 YPANYTSQALPAYNTEPAPYRPSRP 369
+PANY + PA + P P RPS P
Sbjct: 92 FPANYVAPCRPAASPAPPPSRPSSP 116
>AJ311798-1|CAC84640.1| 1036|Homo sapiens mixed lineage kinase 4beta
protein.
Length = 1036
Score = 30.7 bits (66), Expect = 5.8
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 295 YPANYTSQALPAYNTEPAPYRPSRP 369
+PANY + PA + P P RPS P
Sbjct: 92 FPANYVAPCRPAASPAPPPSRPSSP 116
>AJ311797-1|CAC84639.1| 570|Homo sapiens mixed lineage kinase
4alpha protein.
Length = 570
Score = 30.7 bits (66), Expect = 5.8
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 295 YPANYTSQALPAYNTEPAPYRPSRP 369
+PANY + PA + P P RPS P
Sbjct: 92 FPANYVAPCRPAASPAPPPSRPSSP 116
>AB002383-1|BAA20839.2| 1380|Homo sapiens KIAA0385 protein.
Length = 1380
Score = 30.7 bits (66), Expect = 5.8
Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Frame = -1
Query: 568 LKQMNPPRDHTRCQTCP--GQRLSHT*QLSSL--LCSPVDPCFQLLQVNKTCHPNCMD 407
+ Q P D TRC C G+ L S + LCS D CF + NK NC D
Sbjct: 407 IPQSGDPADATRCSICQKTGEVLHEVSNGSVVHRLCS--DSCFSKFRANKGLKTNCCD 462
>BX640951-1|CAE45975.1| 370|Homo sapiens hypothetical protein
protein.
Length = 370
Score = 30.3 bits (65), Expect = 7.6
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -1
Query: 730 SARAGTRGIQTPQVAPLNRTLNTNELHCTGNL 635
SA G RG+Q P++ L + N HC G +
Sbjct: 261 SASCGNRGVQQPRLRCLLNSTEVNPAHCAGKV 292
>BC100790-1|AAI00791.1| 284|Homo sapiens ADAMTSL1 protein protein.
Length = 284
Score = 30.3 bits (65), Expect = 7.6
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -1
Query: 730 SARAGTRGIQTPQVAPLNRTLNTNELHCTGNL 635
SA G RG+Q P++ L + N HC G +
Sbjct: 22 SASCGNRGVQQPRLRCLLNSTEVNPAHCAGKV 53
>BC100788-1|AAI00789.1| 467|Homo sapiens ADAMTSL1 protein protein.
Length = 467
Score = 30.3 bits (65), Expect = 7.6
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -1
Query: 730 SARAGTRGIQTPQVAPLNRTLNTNELHCTGNL 635
SA G RG+Q P++ L + N HC G +
Sbjct: 205 SASCGNRGVQQPRLRCLLNSTEVNPAHCAGKV 236
>BC064404-1|AAH64404.1| 719|Homo sapiens nucleolar protein 11
protein.
Length = 719
Score = 30.3 bits (65), Expect = 7.6
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +1
Query: 166 PKGRGRGWQMNNQAREL--RRPKAVSDEPKVDTSKSKLSADAKE 291
P+G G G+Q + Q+R + RR VS +P+V SK LS K+
Sbjct: 365 PQGCGLGFQNSEQSRRILRRRKIEVSLQPEVPPSKQLLSTIMKD 408
>BC001726-1|AAH01726.2| 408|Homo sapiens NOL11 protein protein.
Length = 408
Score = 30.3 bits (65), Expect = 7.6
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +1
Query: 166 PKGRGRGWQMNNQAREL--RRPKAVSDEPKVDTSKSKLSADAKE 291
P+G G G+Q + Q+R + RR VS +P+V SK LS K+
Sbjct: 54 PQGCGLGFQNSEQSRRILRRRKIEVSLQPEVPPSKQLLSTIMKD 97
>AY598333-1|AAT06744.1| 719|Homo sapiens L14 protein.
Length = 719
Score = 30.3 bits (65), Expect = 7.6
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +1
Query: 166 PKGRGRGWQMNNQAREL--RRPKAVSDEPKVDTSKSKLSADAKE 291
P+G G G+Q + Q+R + RR VS +P+V SK LS K+
Sbjct: 365 PQGCGLGFQNSEQSRRILRRRKIEVSLQPEVPPSKQLLSTIMKD 408
>AL591423-1|CAM13086.1| 1263|Homo sapiens ADAMTS-like 1 protein.
Length = 1263
Score = 30.3 bits (65), Expect = 7.6
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -1
Query: 730 SARAGTRGIQTPQVAPLNRTLNTNELHCTGNL 635
SA G RG+Q P++ L + N HC G +
Sbjct: 1001 SASCGNRGVQQPRLRCLLNSTEVNPAHCAGKV 1032
>AL353895-2|CAM20931.1| 1263|Homo sapiens ADAMTS-like 1 protein.
Length = 1263
Score = 30.3 bits (65), Expect = 7.6
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -1
Query: 730 SARAGTRGIQTPQVAPLNRTLNTNELHCTGNL 635
SA G RG+Q P++ L + N HC G +
Sbjct: 1001 SASCGNRGVQQPRLRCLLNSTEVNPAHCAGKV 1032
>AL158150-6|CAM14352.1| 1263|Homo sapiens ADAMTS-like 1 protein.
Length = 1263
Score = 30.3 bits (65), Expect = 7.6
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -1
Query: 730 SARAGTRGIQTPQVAPLNRTLNTNELHCTGNL 635
SA G RG+Q P++ L + N HC G +
Sbjct: 1001 SASCGNRGVQQPRLRCLLNSTEVNPAHCAGKV 1032
>AL158150-3|CAO03592.1| 463|Homo sapiens ADAMTS-like 1 protein.
Length = 463
Score = 30.3 bits (65), Expect = 7.6
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -1
Query: 730 SARAGTRGIQTPQVAPLNRTLNTNELHCTGNL 635
SA G RG+Q P++ L + N HC G +
Sbjct: 201 SASCGNRGVQQPRLRCLLNSTEVNPAHCAGKV 232
>AL158150-1|CAO03591.1| 258|Homo sapiens ADAMTS-like 1 protein.
Length = 258
Score = 30.3 bits (65), Expect = 7.6
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -1
Query: 730 SARAGTRGIQTPQVAPLNRTLNTNELHCTGNL 635
SA G RG+Q P++ L + N HC G +
Sbjct: 201 SASCGNRGVQQPRLRCLLNSTEVNPAHCAGKV 232
>AK092602-1|BAC03925.1| 262|Homo sapiens protein ( Homo sapiens
cDNA FLJ35283 fis, clone PROST2007528. ).
Length = 262
Score = 30.3 bits (65), Expect = 7.6
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -1
Query: 730 SARAGTRGIQTPQVAPLNRTLNTNELHCTGNL 635
SA G RG+Q P++ L + N HC G +
Sbjct: 205 SASCGNRGVQQPRLRCLLNSTEVNPAHCAGKV 236
>AK023702-1|BAB14647.1| 719|Homo sapiens protein ( Homo sapiens
cDNA FLJ13640 fis, clone PLACE1011221. ).
Length = 719
Score = 30.3 bits (65), Expect = 7.6
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +1
Query: 166 PKGRGRGWQMNNQAREL--RRPKAVSDEPKVDTSKSKLSADAKE 291
P+G G G+Q + Q+R + RR VS +P+V SK LS K+
Sbjct: 365 PQGCGLGFQNSEQSRRILRRRKIEVSLQPEVPPSKQLLSTIMKD 408
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,994,987
Number of Sequences: 237096
Number of extensions: 2779025
Number of successful extensions: 6462
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 6129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6438
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8903143626
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -