Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8j17
         (773 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    26   0.38 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    26   0.38 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    26   0.38 
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    23   3.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   3.6  

>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 25.8 bits (54), Expect = 0.38
 Identities = 14/41 (34%), Positives = 18/41 (43%)
 Frame = +1

Query: 397 WLSCTLNLARCLRIKYSXXXXXXAAC*RAVPVFCSTTRTWI 519
           WL CTL L R  R++YS        C      F +  R W+
Sbjct: 582 WL-CTLLLQRGYRVEYSAASDAFTHCPEGFNEFYNQRRRWM 621


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 25.8 bits (54), Expect = 0.38
 Identities = 14/41 (34%), Positives = 18/41 (43%)
 Frame = +1

Query: 397 WLSCTLNLARCLRIKYSXXXXXXAAC*RAVPVFCSTTRTWI 519
           WL CTL L R  R++YS        C      F +  R W+
Sbjct: 815 WL-CTLLLQRGYRVEYSAASDAFTHCPEGFNEFYNQRRRWM 854


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 25.8 bits (54), Expect = 0.38
 Identities = 14/41 (34%), Positives = 18/41 (43%)
 Frame = +1

Query: 397 WLSCTLNLARCLRIKYSXXXXXXAAC*RAVPVFCSTTRTWI 519
           WL CTL L R  R++YS        C      F +  R W+
Sbjct: 815 WL-CTLLLQRGYRVEYSAASDAFTHCPEGFNEFYNQRRRWM 854


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/30 (30%), Positives = 19/30 (63%)
 Frame = -2

Query: 715 RADLCKSFFSINIELLILRVFALEGCGGSI 626
           +  L  +++ I+  LLI+R+ ++  CG S+
Sbjct: 189 KGTLKTAYYLISFALLIMRLISVCLCGASV 218


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +2

Query: 692 KTFTKVCPLFKLKYTVVN 745
           +TFT  CP+ K K TV N
Sbjct: 6   RTFTIKCPVKKRKCTVSN 23


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,732
Number of Sequences: 336
Number of extensions: 4512
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20857569
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)