Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8j09
         (755 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           28   0.27 
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    27   0.62 
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             26   1.4  
U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase...    25   2.5  
CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative calcium/c...    24   4.4  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    24   4.4  
AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant r...    24   4.4  

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 28.3 bits (60), Expect = 0.27
 Identities = 18/57 (31%), Positives = 26/57 (45%)
 Frame = -1

Query: 413  SIPSFLGIAPTRKAAATSLKASSGFAVGRTPAKSGRAQSANSMTTPSSTPIIGAISR 243
            S PS   +A T       ++AS   A    PAK+    S N + TP+S  + G + R
Sbjct: 925  STPSTSAMAAT--IVPNPVQASPSPATAPAPAKTTSTDSTNGLETPTSETVGGGMHR 979


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 27.1 bits (57), Expect = 0.62
 Identities = 13/47 (27%), Positives = 27/47 (57%)
 Frame = -3

Query: 321 SQKWQSTVGQLHDNTFKYTHHRRNIKKVEEDRLLRSKNCSRRNLIKK 181
           S K + +  Q+H   FK  H+ +  K+++ED++ + +     N+I+K
Sbjct: 221 SLKQECSEKQVHFQLFKLYHNEKEAKRLKEDQISKQQEL---NIIEK 264


>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = -3

Query: 516 VANNKDLHIFTSR-FVQSLALLFEDAHISSKKILPLHTF 403
           V +    H++TS  F + LAL  ++A  ++ +I+P+ TF
Sbjct: 525 VVDTPQKHLYTSSPFSEFLALDMKEAPTTNPRIVPIPTF 563


>U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 332

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
 Frame = +1

Query: 403 EGMERKDLLAANV-RIFKEQGQALDKAARKDVKVLVVGNPANTNALICSKYAPSIPKENF 579
           +G+ R+++    + + F      +D A R +      G P  T A + ++    I  + F
Sbjct: 16  QGLYRENVPIKTICKAFGRSRSFVDNAIRSEATGKSTGRPRKTTADVDARIVEMIRADPF 75

Query: 580 TAMTRLDQNRAQSQLAAK 633
              TR+ Q     Q++AK
Sbjct: 76  KTCTRIKQELG-LQVSAK 92


>CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative
           calcium/calmodulin-dependentprotein kinase, CAKI
           protein.
          Length = 872

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +3

Query: 552 CSIYSKRKFHCHDSS*SKQGSV 617
           CSI+S++K  C D   +K  +V
Sbjct: 647 CSIFSRKKKQCRDKYLAKHNAV 668


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
 Frame = -3

Query: 570  FWNRWSIFRTY*SICIGWVANNK--DLHIFTSRFVQSLALLFEDAHISSKKIL 418
            FW  W   R    +    +  NK  +  + T   + SLAL  ED H+  + IL
Sbjct: 1287 FWQGWGNLR----LKTFQLIENKYFETAVITMILLSSLALALEDVHLPQRPIL 1335


>AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant
           receptor Or4 protein.
          Length = 397

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = +2

Query: 185 FIKLRLEQFLDLNNLSSSTFLILR 256
           F ++ LE+F  + NLS S +++L+
Sbjct: 366 FFRVNLEEFSRIVNLSYSAYVVLK 389


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 734,948
Number of Sequences: 2352
Number of extensions: 16195
Number of successful extensions: 29
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78170964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)