Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8j09
(755 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF125955-5|AAO12427.1| 273|Caenorhabditis elegans Hypothetical ... 250 8e-67
AF125955-3|AAD14720.1| 336|Caenorhabditis elegans Hypothetical ... 250 8e-67
AF125955-4|AAO12428.1| 181|Caenorhabditis elegans Hypothetical ... 66 3e-11
Z49127-1|CAA88944.1| 333|Caenorhabditis elegans Hypothetical pr... 37 0.018
U15420-1|AAA67063.1| 333|Caenorhabditis elegans lactate dehydro... 37 0.018
L43563-1|AAC41613.1| 333|Caenorhabditis elegans L-lactate dehyd... 37 0.018
Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical pr... 36 0.031
Z82271-6|CAB05213.1| 1091|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z73102-19|CAA97421.1| 1091|Caenorhabditis elegans Hypothetical p... 29 3.6
Z83107-6|CAD92391.1| 877|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z83107-5|CAD92390.1| 764|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z83107-4|CAB05498.1| 878|Caenorhabditis elegans Hypothetical pr... 28 6.2
AF014940-1|AAB63933.1| 143|Caenorhabditis elegans Hypothetical ... 28 8.2
>AF125955-5|AAO12427.1| 273|Caenorhabditis elegans Hypothetical
protein F46E10.10b protein.
Length = 273
Score = 250 bits (612), Expect = 8e-67
Identities = 123/199 (61%), Positives = 150/199 (75%), Gaps = 1/199 (0%)
Frame = +1
Query: 124 MAEPIRVVVTGAAGQIAYSLLYQIASGAVFGPQQPVFLHLLDIAPMMGVLEGVVMELADC 303
M+ P+RV+VTGAAGQI YS++ +IA G VFG +QPV L LLD+ +LEGVV EL DC
Sbjct: 1 MSAPLRVLVTGAAGQIGYSIVIRIADGTVFGKEQPVELVLLDVPQCSNILEGVVFELQDC 60
Query: 304 ALPLLAGVLPTANPEEAFKDVAAAFLVGAMPRKEGMERKDLLAANVRIFKEQGQALDKAA 483
ALP L V+ + + AF + AFLVGAMPR+EGMERKDLLAANV+IFK QG+AL + A
Sbjct: 61 ALPTLFSVVAVTDEKSAFTGIDYAFLVGAMPRREGMERKDLLAANVKIFKSQGKALAEYA 120
Query: 484 RKDVKVLVVGNPANTNALICSKYAP-SIPKENFTAMTRLDQNRAQSQLAAKIGVPVKDVK 660
+ KV+VVGNPANTNA I +KYA IP +NF+AMTRLD NRA +QLA K G + +VK
Sbjct: 121 KPTTKVIVVGNPANTNAFIAAKYAAGKIPAKNFSAMTRLDHNRALAQLALKTGTTIGNVK 180
Query: 661 RVIIWGNHSSTQFPDASNA 717
VIIWGNHS TQFPD ++A
Sbjct: 181 NVIIWGNHSGTQFPDVTHA 199
>AF125955-3|AAD14720.1| 336|Caenorhabditis elegans Hypothetical
protein F46E10.10a protein.
Length = 336
Score = 250 bits (612), Expect = 8e-67
Identities = 123/199 (61%), Positives = 150/199 (75%), Gaps = 1/199 (0%)
Frame = +1
Query: 124 MAEPIRVVVTGAAGQIAYSLLYQIASGAVFGPQQPVFLHLLDIAPMMGVLEGVVMELADC 303
M+ P+RV+VTGAAGQI YS++ +IA G VFG +QPV L LLD+ +LEGVV EL DC
Sbjct: 1 MSAPLRVLVTGAAGQIGYSIVIRIADGTVFGKEQPVELVLLDVPQCSNILEGVVFELQDC 60
Query: 304 ALPLLAGVLPTANPEEAFKDVAAAFLVGAMPRKEGMERKDLLAANVRIFKEQGQALDKAA 483
ALP L V+ + + AF + AFLVGAMPR+EGMERKDLLAANV+IFK QG+AL + A
Sbjct: 61 ALPTLFSVVAVTDEKSAFTGIDYAFLVGAMPRREGMERKDLLAANVKIFKSQGKALAEYA 120
Query: 484 RKDVKVLVVGNPANTNALICSKYAP-SIPKENFTAMTRLDQNRAQSQLAAKIGVPVKDVK 660
+ KV+VVGNPANTNA I +KYA IP +NF+AMTRLD NRA +QLA K G + +VK
Sbjct: 121 KPTTKVIVVGNPANTNAFIAAKYAAGKIPAKNFSAMTRLDHNRALAQLALKTGTTIGNVK 180
Query: 661 RVIIWGNHSSTQFPDASNA 717
VIIWGNHS TQFPD ++A
Sbjct: 181 NVIIWGNHSGTQFPDVTHA 199
>AF125955-4|AAO12428.1| 181|Caenorhabditis elegans Hypothetical
protein F46E10.10c protein.
Length = 181
Score = 65.7 bits (153), Expect = 3e-11
Identities = 29/44 (65%), Positives = 34/44 (77%)
Frame = +1
Query: 586 MTRLDQNRAQSQLAAKIGVPVKDVKRVIIWGNHSSTQFPDASNA 717
MTRLD NRA +QLA K G + +VK VIIWGNHS TQFPD ++A
Sbjct: 1 MTRLDHNRALAQLALKTGTTIGNVKNVIIWGNHSGTQFPDVTHA 44
>Z49127-1|CAA88944.1| 333|Caenorhabditis elegans Hypothetical
protein F13D12.2 protein.
Length = 333
Score = 36.7 bits (81), Expect = 0.018
Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
Frame = +1
Query: 397 RKEGMERKDLLAANVRIFKEQGQALDKAARKDVKVLVVGNPANTNALICSKYAPSIPKEN 576
++EG R L+ NV IFK L K + D +LVV NP + + K + +P+E
Sbjct: 100 QREGETRLSLVQRNVEIFKGIIPQLVKYS-PDTCILVVSNPVDVLTYVTWKLS-GLPRER 157
Query: 577 -FTAMTRLDQNRAQSQLAAKIGVPVKDVKRVIIWGNHSST 693
F + T LD R + L+ K+ + II G H +
Sbjct: 158 VFGSGTNLDSARFRFLLSEKLNIAPSSCHGWII-GEHGDS 196
>U15420-1|AAA67063.1| 333|Caenorhabditis elegans lactate
dehydrogenase protein.
Length = 333
Score = 36.7 bits (81), Expect = 0.018
Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
Frame = +1
Query: 397 RKEGMERKDLLAANVRIFKEQGQALDKAARKDVKVLVVGNPANTNALICSKYAPSIPKEN 576
++EG R L+ NV IFK L K + D +LVV NP + + K + +P+E
Sbjct: 100 QREGETRLSLVQRNVEIFKGIIPQLVKYS-PDTCILVVSNPVDVLTYVTWKLS-GLPRER 157
Query: 577 -FTAMTRLDQNRAQSQLAAKIGVPVKDVKRVIIWGNHSST 693
F + T LD R + L+ K+ + II G H +
Sbjct: 158 VFGSGTNLDSARFRFLLSEKLNIAPSSCHGWII-GEHGDS 196
>L43563-1|AAC41613.1| 333|Caenorhabditis elegans L-lactate
dehydrogenase protein.
Length = 333
Score = 36.7 bits (81), Expect = 0.018
Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
Frame = +1
Query: 397 RKEGMERKDLLAANVRIFKEQGQALDKAARKDVKVLVVGNPANTNALICSKYAPSIPKEN 576
++EG R L+ NV IFK L K + D +LVV NP + + K + +P+E
Sbjct: 100 QREGETRLSLVQRNVEIFKGIIPQLVKYS-PDTCILVVSNPVDVLTYVTWKLS-GLPRER 157
Query: 577 -FTAMTRLDQNRAQSQLAAKIGVPVKDVKRVIIWGNHSST 693
F + T LD R + L+ K+ + II G H +
Sbjct: 158 VFGSGTNLDSARFRFLLSEKLNIAPSSCHGWII-GEHGDS 196
>Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical
protein K10D3.4 protein.
Length = 922
Score = 35.9 bits (79), Expect = 0.031
Identities = 29/79 (36%), Positives = 38/79 (48%), Gaps = 12/79 (15%)
Frame = +3
Query: 132 TYKSCCNWC----CRTNCIL-TSLSN-------CVWSSFWTSTTCLPPPS*YCAYDGCT* 275
TYK C ++C CI T+L++ C SS STTC P + YC YDG T
Sbjct: 453 TYKECQDYCRDARSEPQCIQGTALTDSNGNFIICGGSSA-ASTTC--PANHYCYYDGTTY 509
Query: 276 RCCHGVGRLCSATFGWGSS 332
CC CS ++ G+S
Sbjct: 510 GCCPTQAYTCSLSYKSGAS 528
>Z82271-6|CAB05213.1| 1091|Caenorhabditis elegans Hypothetical
protein F54E12.2 protein.
Length = 1091
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = +1
Query: 454 EQGQALDKAARKDVKVLVVGNPANTNALICSKYAPSIPKENFTAMTRLDQNRAQSQLAAK 633
+Q ++ + K V +V P++T + + +A S PK A TRL + S+ +++
Sbjct: 42 DQEDSVVDESMKSVNSPIVNTPSSTASHCTNSFATSTPKSKSNASTRLGSSYGSSRSSSQ 101
>Z73102-19|CAA97421.1| 1091|Caenorhabditis elegans Hypothetical
protein F54E12.2 protein.
Length = 1091
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = +1
Query: 454 EQGQALDKAARKDVKVLVVGNPANTNALICSKYAPSIPKENFTAMTRLDQNRAQSQLAAK 633
+Q ++ + K V +V P++T + + +A S PK A TRL + S+ +++
Sbjct: 42 DQEDSVVDESMKSVNSPIVNTPSSTASHCTNSFATSTPKSKSNASTRLGSSYGSSRSSSQ 101
>Z83107-6|CAD92391.1| 877|Caenorhabditis elegans Hypothetical
protein F32A7.5c protein.
Length = 877
Score = 28.3 bits (60), Expect = 6.2
Identities = 27/88 (30%), Positives = 36/88 (40%), Gaps = 5/88 (5%)
Frame = -1
Query: 512 PTTRTFTSLRAA-LSKAWPCS-LKMRTLAARRSFLSIPSFLGIAP---TRKAAATSLKAS 348
P RT RA L+K P S R RS + P P T KA + K +
Sbjct: 288 PAPRTAVPSRATVLTKTAPASKAPTRAPVPARSAPAPPRGAPAKPAANTAKAEPIAQKKT 347
Query: 347 SGFAVGRTPAKSGRAQSANSMTTPSSTP 264
G G P+K A A++ T+P+ P
Sbjct: 348 VGKVQGTAPSKPAPAAPASAATSPAPAP 375
>Z83107-5|CAD92390.1| 764|Caenorhabditis elegans Hypothetical
protein F32A7.5b protein.
Length = 764
Score = 28.3 bits (60), Expect = 6.2
Identities = 27/88 (30%), Positives = 36/88 (40%), Gaps = 5/88 (5%)
Frame = -1
Query: 512 PTTRTFTSLRAA-LSKAWPCS-LKMRTLAARRSFLSIPSFLGIAP---TRKAAATSLKAS 348
P RT RA L+K P S R RS + P P T KA + K +
Sbjct: 288 PAPRTAVPSRATVLTKTAPASKAPTRAPVPARSAPAPPRGAPAKPAANTAKAEPIAQKKT 347
Query: 347 SGFAVGRTPAKSGRAQSANSMTTPSSTP 264
G G P+K A A++ T+P+ P
Sbjct: 348 VGKVQGTAPSKPAPAAPASAATSPAPAP 375
>Z83107-4|CAB05498.1| 878|Caenorhabditis elegans Hypothetical
protein F32A7.5a protein.
Length = 878
Score = 28.3 bits (60), Expect = 6.2
Identities = 27/88 (30%), Positives = 36/88 (40%), Gaps = 5/88 (5%)
Frame = -1
Query: 512 PTTRTFTSLRAA-LSKAWPCS-LKMRTLAARRSFLSIPSFLGIAP---TRKAAATSLKAS 348
P RT RA L+K P S R RS + P P T KA + K +
Sbjct: 288 PAPRTAVPSRATVLTKTAPASKAPTRAPVPARSAPAPPRGAPAKPAANTAKAEPIAQKKT 347
Query: 347 SGFAVGRTPAKSGRAQSANSMTTPSSTP 264
G G P+K A A++ T+P+ P
Sbjct: 348 VGKVQGTAPSKPAPAAPASAATSPAPAP 375
>AF014940-1|AAB63933.1| 143|Caenorhabditis elegans Hypothetical
protein W02D7.3 protein.
Length = 143
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -1
Query: 347 SGFAVGRTPAKSGRAQSANSMTTPSSTPIIGAISRRWRKTGC 222
+ +A +P S ++S S + S+TP A+SRR GC
Sbjct: 71 TNYAKRHSPPPSYSSRSKQSSVSSSATPTKSAVSRRNYLAGC 112
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,333,421
Number of Sequences: 27780
Number of extensions: 346697
Number of successful extensions: 1189
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1184
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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