Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8j06
         (692 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    23   1.8  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    23   1.8  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   2.4  
AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    22   5.5  
AY052623-1|AAL15471.1|  101|Tribolium castaneum kynurenine 3-mon...    22   5.5  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    22   5.5  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    22   5.5  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    22   5.5  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   9.6  

>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = -2

Query: 622 YHKVHKLNGNPTFLSCEIFLHAIYASLT 539
           Y++ +  NG+P ++S E+F +   A +T
Sbjct: 437 YYENNHYNGDPNYISPEVFPNTNNAIMT 464


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = -2

Query: 622 YHKVHKLNGNPTFLSCEIFLHAIYASLT 539
           Y++ +  NG+P ++S E+F +   A +T
Sbjct: 385 YYENNHYNGDPNYISPEVFPNTNNAIMT 412


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 11/38 (28%), Positives = 23/38 (60%)
 Frame = -3

Query: 429 LLCMSFS*FYRKSFTIMAHNTTSHVNG*VLKYKFVMVR 316
           LL M+F+   ++S T +     SH+ G ++ Y+ V+++
Sbjct: 544 LLSMAFATRMKQSRTKIEALVKSHIAGAIVTYELVVIQ 581


>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = +2

Query: 311 NERTITNLYFKTYPFTCDVVL*AIIVKDF 397
           N   + + Y+KT+P    ++   ++V DF
Sbjct: 15  NAAELKDFYYKTFPDAVPLIGEDLLVNDF 43


>AY052623-1|AAL15471.1|  101|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 101

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = +2

Query: 311 NERTITNLYFKTYPFTCDVVL*AIIVKDF 397
           N   + + Y+KT+P    ++   ++V DF
Sbjct: 30  NAAELKDFYYKTFPDAVPLIGEDLLVNDF 58


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = +2

Query: 311 NERTITNLYFKTYPFTCDVVL*AIIVKDF 397
           N   + + Y+KT+P    ++   ++V DF
Sbjct: 248 NAAELKDFYYKTFPDAVPLIGEDLLVNDF 276


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = +2

Query: 311 NERTITNLYFKTYPFTCDVVL*AIIVKDF 397
           N   + + Y+KT+P    ++   ++V DF
Sbjct: 248 NAAELKDFYYKTFPDAVPLIGEDLLVNDF 276


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = +2

Query: 311 NERTITNLYFKTYPFTCDVVL*AIIVKDF 397
           N   + + Y+KT+P    ++   ++V DF
Sbjct: 248 NAAELKDFYYKTFPDAVPLIGEDLLVNDF 276


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 490 PQNLLDEYNRRQKRH 534
           PQN+LDE  +   +H
Sbjct: 123 PQNVLDEEEKSSTKH 137


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,987
Number of Sequences: 336
Number of extensions: 3286
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)