Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8j03
         (656 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY117994-1|AAM66793.1|  120|Anopheles gambiae glucose-6-phosphat...    24   4.9  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   8.5  
AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    23   8.5  

>AY117994-1|AAM66793.1|  120|Anopheles gambiae glucose-6-phosphate
           dehydrogenase protein.
          Length = 120

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +3

Query: 126 FYCLSSCNFKQDAKLALQTLTNFE 197
           FY   SC+ ++D +L  Q ++ FE
Sbjct: 41  FYVAGSCDSRRDFELLNQEISKFE 64


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -2

Query: 550  LKFSFEKQMTSSLDCVLHVEFYS 482
            L+FS  K+   +LD V+H  + S
Sbjct: 1947 LRFSLHKEHNETLDRVIHFTYVS 1969


>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 527 LFFKTKFKK*CHLFFKTELALRVEFYV 607
           +FFKTK +K    ++   L L   FY+
Sbjct: 144 VFFKTKLRKLSSSYYLAALGLSDTFYL 170


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 636,930
Number of Sequences: 2352
Number of extensions: 11089
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65232180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)