Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8j03
         (656 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-2280|AAF57998.1|  233|Drosophila melanogaster CG4398-PA...    31   1.0  
AY121698-1|AAM52025.1| 1228|Drosophila melanogaster RE70806p pro...    28   9.7  
AF210316-1|AAF19446.1| 1235|Drosophila melanogaster hibris protein.    28   9.7  
AE013599-2004|AAF58172.3| 1228|Drosophila melanogaster CG7449-PA...    28   9.7  
AE013599-2003|AAO41390.1| 1235|Drosophila melanogaster CG7449-PB...    28   9.7  

>AE013599-2280|AAF57998.1|  233|Drosophila melanogaster CG4398-PA
           protein.
          Length = 233

 Score = 31.5 bits (68), Expect = 1.0
 Identities = 18/75 (24%), Positives = 37/75 (49%)
 Frame = +3

Query: 66  NNYVEHLNSDMGVVMLVEEYFYCLSSCNFKQDAKLALQTLTNFESLSDLMASYNFSTPDL 245
           + +V  +N       L  +++  L S  FK  ++ A +T +N +S+   ++ +     DL
Sbjct: 160 DRFVALINEKRQKSALFAKFYQALKSAEFKAKSEAAWKT-SNVQSVVQELSRHAIDAQDL 218

Query: 246 DTNAYELMDFE*NTM 290
            T  YE++ +  NT+
Sbjct: 219 KTIGYEVISWGPNTL 233


>AY121698-1|AAM52025.1| 1228|Drosophila melanogaster RE70806p protein.
          Length = 1228

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +2

Query: 188  KLRVAIRSNGKLQLFNARPGHKRIRIDGL 274
            +LR+      K +  +A+PGH+ I +DGL
Sbjct: 968  RLRLKQHGEDKYKYVDAKPGHQNISLDGL 996


>AF210316-1|AAF19446.1| 1235|Drosophila melanogaster hibris protein.
          Length = 1235

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +2

Query: 188  KLRVAIRSNGKLQLFNARPGHKRIRIDGL 274
            +LR+      K +  +A+PGH+ I +DGL
Sbjct: 968  RLRLKQHGEDKYKYVDAKPGHQNISLDGL 996


>AE013599-2004|AAF58172.3| 1228|Drosophila melanogaster CG7449-PA,
            isoform A protein.
          Length = 1228

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +2

Query: 188  KLRVAIRSNGKLQLFNARPGHKRIRIDGL 274
            +LR+      K +  +A+PGH+ I +DGL
Sbjct: 968  RLRLKQHGEDKYKYVDAKPGHQNISLDGL 996


>AE013599-2003|AAO41390.1| 1235|Drosophila melanogaster CG7449-PB,
            isoform B protein.
          Length = 1235

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +2

Query: 188  KLRVAIRSNGKLQLFNARPGHKRIRIDGL 274
            +LR+      K +  +A+PGH+ I +DGL
Sbjct: 968  RLRLKQHGEDKYKYVDAKPGHQNISLDGL 996


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,294,637
Number of Sequences: 53049
Number of extensions: 491625
Number of successful extensions: 974
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 974
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2806815600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)