Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8j02
(301 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P17704 Cluster: 40S ribosomal protein S17; n=63; Eukary... 148 2e-35
UniRef50_P08708 Cluster: 40S ribosomal protein S17; n=105; Eukar... 130 5e-30
UniRef50_A6ND66 Cluster: Uncharacterized protein ENSP00000351365... 118 3e-26
UniRef50_UPI0000D9A419 Cluster: PREDICTED: similar to 40S riboso... 109 9e-24
UniRef50_UPI00001CC3BC Cluster: PREDICTED: similar to 40S riboso... 109 2e-23
UniRef50_UPI0001552FEC Cluster: PREDICTED: similar to ribosomal ... 100 6e-21
UniRef50_Q7XEQ3 Cluster: 40S ribosomal protein S17-4, putative, ... 93 8e-19
UniRef50_A0ED58 Cluster: Chromosome undetermined scaffold_9, who... 82 2e-15
UniRef50_UPI00005A5879 Cluster: PREDICTED: similar to 40S riboso... 80 8e-15
UniRef50_A7AM97 Cluster: 40S ribosomal protein S17, putative; n=... 73 1e-12
UniRef50_Q4Q806 Cluster: 40S ribosomal protein S17, putative; n=... 72 3e-12
UniRef50_A4D1Q6 Cluster: Similar to dJ753D5.2 (Novel protein sim... 62 3e-09
UniRef50_Q8SSF9 Cluster: 40S RIBOSOMAL PROTEIN S17; n=1; Encepha... 60 1e-08
UniRef50_Q4TBI5 Cluster: Chromosome 13 SCAF7124, whole genome sh... 57 9e-08
UniRef50_Q9AW27 Cluster: RpS17 protein; n=1; Guillardia theta|Re... 38 0.058
UniRef50_A5DJQ3 Cluster: Putative uncharacterized protein; n=1; ... 37 0.077
UniRef50_Q9WY64 Cluster: Flagellar M-ring protein; n=3; Thermoto... 33 0.95
UniRef50_Q23DU0 Cluster: Putative uncharacterized protein; n=1; ... 33 1.7
UniRef50_Q9FRI5 Cluster: Putative uncharacterized protein F4F7.2... 32 2.2
UniRef50_UPI0000E48CF7 Cluster: PREDICTED: similar to Brms1l-pro... 32 2.9
UniRef50_Q9EZA9 Cluster: Mob/Pre; n=1; Bacillus coagulans|Rep: M... 32 2.9
UniRef50_A2UAG4 Cluster: Metal dependent phosphohydrolase; n=2; ... 32 2.9
UniRef50_Q8TXZ1 Cluster: NMD protein affecting ribosome stabilit... 32 2.9
UniRef50_Q10LQ3 Cluster: Expressed protein; n=6; Oryza sativa|Re... 31 3.8
UniRef50_Q8TUZ3 Cluster: 30S ribosomal protein S17e; n=6; Archae... 31 3.8
UniRef50_P54026 Cluster: 30S ribosomal protein S17e; n=11; cellu... 31 3.8
UniRef50_UPI000065E659 Cluster: Probable RNA-binding protein 25 ... 31 6.7
UniRef50_Q2B171 Cluster: Post-translocation molecular chaperone;... 31 6.7
UniRef50_Q1F0E9 Cluster: Chemotaxis sensory transducer precursor... 31 6.7
UniRef50_A0QLA0 Cluster: Methyltransferase, putative, family pro... 31 6.7
UniRef50_Q95YE6 Cluster: Ligase protein 4; n=2; Caenorhabditis|R... 31 6.7
UniRef50_Q17A26 Cluster: Heterogeneous nuclear ribonucleoprotein... 31 6.7
UniRef50_A0C569 Cluster: Chromosome undetermined scaffold_15, wh... 31 6.7
UniRef50_UPI000023F2A2 Cluster: hypothetical protein FG05967.1; ... 30 8.9
UniRef50_A1ZCW0 Cluster: Putative uncharacterized protein; n=1; ... 30 8.9
UniRef50_Q54WY1 Cluster: Putative uncharacterized protein; n=1; ... 30 8.9
UniRef50_A2F4D0 Cluster: Putative uncharacterized protein; n=1; ... 30 8.9
UniRef50_A3LY64 Cluster: Predicted protein; n=1; Pichia stipitis... 30 8.9
>UniRef50_P17704 Cluster: 40S ribosomal protein S17; n=63;
Eukaryota|Rep: 40S ribosomal protein S17 - Drosophila
melanogaster (Fruit fly)
Length = 131
Score = 148 bits (359), Expect = 2e-35
Identities = 71/82 (86%), Positives = 75/82 (91%)
Frame = +2
Query: 2 TKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDT 181
TKPLRNKIAG+ THLM RLRHSQVRGISIKLQEEERERRDNYVP VSALE DIIEVD DT
Sbjct: 43 TKPLRNKIAGYVTHLMGRLRHSQVRGISIKLQEEERERRDNYVPAVSALEQDIIEVDADT 102
Query: 182 KDMLKMLDFNNINGLQLTQPAT 247
K+MLK+LDF+NI GLQLTQP T
Sbjct: 103 KEMLKLLDFHNIRGLQLTQPNT 124
>UniRef50_P08708 Cluster: 40S ribosomal protein S17; n=105;
Eukaryota|Rep: 40S ribosomal protein S17 - Homo sapiens
(Human)
Length = 135
Score = 130 bits (315), Expect = 5e-30
Identities = 59/80 (73%), Positives = 72/80 (90%)
Frame = +2
Query: 2 TKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDT 181
+K LRNKIAG+ THLM+R++ VRGISIKLQEEERERRDNYVPEVSAL+ +IIEVDPDT
Sbjct: 43 SKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDT 102
Query: 182 KDMLKMLDFNNINGLQLTQP 241
K+MLK+LDF +++ LQ+TQP
Sbjct: 103 KEMLKLLDFGSLSNLQVTQP 122
>UniRef50_A6ND66 Cluster: Uncharacterized protein ENSP00000351365;
n=3; Homo/Pan/Gorilla group|Rep: Uncharacterized protein
ENSP00000351365 - Homo sapiens (Human)
Length = 135
Score = 118 bits (283), Expect = 3e-26
Identities = 51/83 (61%), Positives = 68/83 (81%)
Frame = +2
Query: 2 TKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDT 181
+K LRNKI G+ HLM+R+R VRGISIKLQEEERE RDNYVPE+S L+ + +EVDPDT
Sbjct: 43 SKKLRNKIVGYVKHLMKRIRKGPVRGISIKLQEEERENRDNYVPEISVLDQETVEVDPDT 102
Query: 182 KDMLKMLDFNNINGLQLTQPATQ 250
K+ML++LDF +++ LQ+T+P +
Sbjct: 103 KEMLELLDFVSLSNLQVTRPTVE 125
>UniRef50_UPI0000D9A419 Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S17 - Macaca mulatta
Length = 189
Score = 109 bits (263), Expect = 9e-24
Identities = 49/80 (61%), Positives = 66/80 (82%)
Frame = +2
Query: 2 TKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDT 181
+K L NKI G+ HLM+R++ VRGISIKLQE+ERER+DNYVPE+SA + + IEVDPDT
Sbjct: 97 SKKLCNKIVGYVMHLMKRIQKDPVRGISIKLQEKERERKDNYVPEISATDQETIEVDPDT 156
Query: 182 KDMLKMLDFNNINGLQLTQP 241
K+M K+L+F +++ LQ+TQP
Sbjct: 157 KEMRKVLNFVSLSNLQVTQP 176
>UniRef50_UPI00001CC3BC Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S17 - Rattus norvegicus
Length = 190
Score = 109 bits (261), Expect = 2e-23
Identities = 51/77 (66%), Positives = 60/77 (77%)
Frame = +2
Query: 11 LRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDM 190
LRNKI + THLM+R++ VRGISIKLQEEERERRDNYVPE SAL+ +IIEVDPDTK M
Sbjct: 101 LRNKITSYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEGSALDQEIIEVDPDTKKM 160
Query: 191 LKMLDFNNINGLQLTQP 241
L + F ++ Q TQP
Sbjct: 161 LNLPGFGRLSNFQDTQP 177
>UniRef50_UPI0001552FEC Cluster: PREDICTED: similar to ribosomal
protein S17; n=8; Eutheria|Rep: PREDICTED: similar to
ribosomal protein S17 - Mus musculus
Length = 228
Score = 100 bits (240), Expect = 6e-21
Identities = 47/80 (58%), Positives = 65/80 (81%)
Frame = +2
Query: 2 TKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDT 181
+K L++KIAG+ THL ++++ VRGISIKLQEEER R +Y+PEVSAL+ +I EVDP T
Sbjct: 80 SKKLQSKIAGYVTHLTKQIQRGPVRGISIKLQEEER--RADYIPEVSALDQEITEVDPAT 137
Query: 182 KDMLKMLDFNNINGLQLTQP 241
K+MLK+LD +++ LQ+TQP
Sbjct: 138 KEMLKLLDLGSLSNLQVTQP 157
>UniRef50_Q7XEQ3 Cluster: 40S ribosomal protein S17-4, putative,
expressed; n=7; Eukaryota|Rep: 40S ribosomal protein
S17-4, putative, expressed - Oryza sativa subsp.
japonica (Rice)
Length = 141
Score = 93.5 bits (222), Expect = 8e-19
Identities = 46/86 (53%), Positives = 61/86 (70%)
Frame = +2
Query: 2 TKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDT 181
+K LRNK+AGF THLMRR++ VRGIS+KLQEEERERR ++VPE SALE + I VD +T
Sbjct: 43 SKRLRNKVAGFTTHLMRRIQRGPVRGISLKLQEEERERRMDFVPEKSALEVEEIRVDKET 102
Query: 182 KDMLKMLDFNNINGLQLTQPATQGGY 259
+ML L ++ G++ Q + Y
Sbjct: 103 MEMLAALGMADLPGVERQQEVSAPTY 128
>UniRef50_A0ED58 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_9,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 178
Score = 82.2 bits (194), Expect = 2e-15
Identities = 38/65 (58%), Positives = 52/65 (80%)
Frame = +2
Query: 2 TKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDT 181
+K LRNKIAGFATHL++R++ V+GIS+K+QEEERERR +YVPE S+++ D + D D
Sbjct: 83 SKKLRNKIAGFATHLLKRIQTGSVKGISLKIQEEERERRLDYVPEKSSVDIDNLRGDQDV 142
Query: 182 KDMLK 196
K ML+
Sbjct: 143 KRMLE 147
>UniRef50_UPI00005A5879 Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S17 - Canis familiaris
Length = 177
Score = 80.2 bits (189), Expect = 8e-15
Identities = 40/80 (50%), Positives = 58/80 (72%)
Frame = +2
Query: 2 TKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDT 181
+K LRN IAG+ HL +R++ V + ER +++ YVPEVSAL+ +IIEVDPDT
Sbjct: 92 SKKLRNGIAGYVAHLTKRIQQGPVA------RGGER-KKETYVPEVSALDQEIIEVDPDT 144
Query: 182 KDMLKMLDFNNINGLQLTQP 241
++MLK+LDF +++ LQ+TQP
Sbjct: 145 QEMLKLLDFGSLSNLQVTQP 164
>UniRef50_A7AM97 Cluster: 40S ribosomal protein S17, putative; n=1;
Babesia bovis|Rep: 40S ribosomal protein S17, putative -
Babesia bovis
Length = 145
Score = 73.3 bits (172), Expect = 1e-12
Identities = 35/60 (58%), Positives = 44/60 (73%)
Frame = +2
Query: 32 FATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFN 211
F HLMRR++ VRGIS+KLQEEERERR ++VPE S ++ +I+VD DT DML L N
Sbjct: 66 FIIHLMRRIQKGPVRGISLKLQEEERERRMDFVPERSEVDVPLIQVDQDTADMLTFLKLN 125
>UniRef50_Q4Q806 Cluster: 40S ribosomal protein S17, putative; n=6;
Trypanosomatidae|Rep: 40S ribosomal protein S17,
putative - Leishmania major
Length = 143
Score = 71.7 bits (168), Expect = 3e-12
Identities = 36/71 (50%), Positives = 49/71 (69%), Gaps = 3/71 (4%)
Frame = +2
Query: 2 TKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDI---IEVD 172
+K L+NKIAG+ TH+M+RL VRGIS+KLQEEERERR ++ P S ++ I + VD
Sbjct: 43 SKKLKNKIAGYTTHIMKRLARGPVRGISLKLQEEERERRMDHAPATSDVDKVIQSGVSVD 102
Query: 173 PDTKDMLKMLD 205
T ML+ L+
Sbjct: 103 KKTMQMLQRLE 113
>UniRef50_A4D1Q6 Cluster: Similar to dJ753D5.2 (Novel protein
similar to RPS17 (40S ribosomal protein S17)); n=2;
Eutheria|Rep: Similar to dJ753D5.2 (Novel protein
similar to RPS17 (40S ribosomal protein S17)) - Homo
sapiens (Human)
Length = 121
Score = 61.7 bits (143), Expect = 3e-09
Identities = 31/73 (42%), Positives = 46/73 (63%)
Frame = +2
Query: 2 TKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDT 181
++ L +KIAG+ THLM+ +R S + +S R R NYVPE S L+ +I EVD T
Sbjct: 43 SRELCSKIAGYVTHLMKEIRGSDSQ-VSPSSCRRRRRDRSNYVPEGSVLDQEITEVDAGT 101
Query: 182 KDMLKMLDFNNIN 220
K+MLK+ F +++
Sbjct: 102 KEMLKLPGFGSVS 114
>UniRef50_Q8SSF9 Cluster: 40S RIBOSOMAL PROTEIN S17; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S17
- Encephalitozoon cuniculi
Length = 120
Score = 60.1 bits (139), Expect = 1e-08
Identities = 27/65 (41%), Positives = 43/65 (66%)
Frame = +2
Query: 2 TKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDT 181
+K L+N+IAG+ T L +++ + IK EEERER++N +P+ S L+ D +EVD T
Sbjct: 43 SKKLKNEIAGYLTSLYKKILKGTYNKVYIKSHEEERERKENVIPKESMLDVDCVEVDDVT 102
Query: 182 KDMLK 196
+M+K
Sbjct: 103 MEMIK 107
>UniRef50_Q4TBI5 Cluster: Chromosome 13 SCAF7124, whole genome
shotgun sequence; n=2; Tetraodon nigroviridis|Rep:
Chromosome 13 SCAF7124, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 372
Score = 56.8 bits (131), Expect = 9e-08
Identities = 23/36 (63%), Positives = 33/36 (91%)
Frame = +2
Query: 134 EVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 241
+VSAL+ ++IEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 326 QVSALDQELIEVDPDTKEMLKLLDFGSLSNLQVTQP 361
>UniRef50_Q9AW27 Cluster: RpS17 protein; n=1; Guillardia theta|Rep:
RpS17 protein - Guillardia theta (Cryptomonas phi)
Length = 118
Score = 37.5 bits (83), Expect = 0.058
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Frame = +2
Query: 2 TKPLRNKIAGFATHLMRRLRHSQVRGI--SIKLQEEERERRDNYVPEVSALEHDIIEVDP 175
+K LRNKIAG+ THL++ + + I +IK E + S E + VD
Sbjct: 43 SKSLRNKIAGYVTHLIKEFFKGKKKKIYTNIKFDINNIEINNKESEVFSNTELKLNLVDD 102
Query: 176 DTKDMLKMLDFNNIN 220
+TK M+K L F N N
Sbjct: 103 ETKQMIKKL-FPNKN 116
>UniRef50_A5DJQ3 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 606
Score = 37.1 bits (82), Expect = 0.077
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = +2
Query: 74 RGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPATQG 253
R I L +ER + + ++ ++ I++ P T ML FNNI+G QP TQ
Sbjct: 112 RQFQIHLARQERIKESQTLYHINRFDNSIVQKPPRTSYMLSPHTFNNISGNTKHQPPTQT 171
Query: 254 GYG 262
+G
Sbjct: 172 LHG 174
>UniRef50_Q9WY64 Cluster: Flagellar M-ring protein; n=3;
Thermotogaceae|Rep: Flagellar M-ring protein -
Thermotoga maritima
Length = 532
Score = 33.5 bits (73), Expect = 0.95
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +2
Query: 23 IAGFATHLMRRLRHSQVRGISIKLQEEERERR-DNYVPEVSALEHDIIEVDPDTKDMLKM 199
+ GF T ++ L Q+R I + EER R+ + V E+ E EV P+ K++L++
Sbjct: 446 LLGFLTFMLIYLMIVQIRRIRARKLAEERRRKLEEEVKEILQEELKEEEVSPEEKELLEL 505
Query: 200 LD 205
L+
Sbjct: 506 LE 507
>UniRef50_Q23DU0 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 644
Score = 32.7 bits (71), Expect = 1.7
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +2
Query: 2 TKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERR 118
TKP N+ GF + ++ +Q++ S K++EEERE+R
Sbjct: 206 TKPKVNRPQGFTIGQILKIEENQIQYKSKKIEEEEREQR 244
>UniRef50_Q9FRI5 Cluster: Putative uncharacterized protein F4F7.25;
n=1; Arabidopsis thaliana|Rep: Putative uncharacterized
protein F4F7.25 - Arabidopsis thaliana (Mouse-ear cress)
Length = 790
Score = 32.3 bits (70), Expect = 2.2
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 38 THLMRRLRHSQVRGISIKLQEEERE-RRDNYVPEVSALEHDIIEVDPDTKDML 193
T L+ H + + I LQ+ +E RR YVP+ S + HD +E D +DML
Sbjct: 668 TFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHD-VESDGHKEDML 719
>UniRef50_UPI0000E48CF7 Cluster: PREDICTED: similar to Brms1l-prov
protein; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to Brms1l-prov protein -
Strongylocentrotus purpuratus
Length = 318
Score = 31.9 bits (69), Expect = 2.9
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +2
Query: 56 LRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNIN 220
LR ++ I KLQ EE+ R+N+ E S L D+++ D D K D +NI+
Sbjct: 121 LRELRMENIRNKLQSEEKASRENHESEKSLL-RDLMKADLDEKIRRLEEDRHNID 174
>UniRef50_Q9EZA9 Cluster: Mob/Pre; n=1; Bacillus coagulans|Rep:
Mob/Pre - Bacillus coagulans
Length = 474
Score = 31.9 bits (69), Expect = 2.9
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Frame = +2
Query: 59 RHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDML----KMLDF-NNIN 220
+H Q +G I+ +EE ER+ VPE + + +V +TK++ ++ +F NN+N
Sbjct: 164 KHLQEKGFEIQRGKEESERKHLSVPEYKEAKEEAKKVKEETKELASKASQLAEFHNNVN 222
>UniRef50_A2UAG4 Cluster: Metal dependent phosphohydrolase; n=2;
Bacillus|Rep: Metal dependent phosphohydrolase -
Bacillus coagulans 36D1
Length = 216
Score = 31.9 bits (69), Expect = 2.9
Identities = 15/34 (44%), Positives = 25/34 (73%)
Frame = +2
Query: 68 QVRGISIKLQEEERERRDNYVPEVSALEHDIIEV 169
+VRG+++ + E+E E+ D ++ E SAL HDI +V
Sbjct: 32 RVRGLALYIAEKE-EKGDRFIIEASALLHDIPDV 64
>UniRef50_Q8TXZ1 Cluster: NMD protein affecting ribosome stability
and mRNA decay; n=1; Methanopyrus kandleri|Rep: NMD
protein affecting ribosome stability and mRNA decay -
Methanopyrus kandleri
Length = 354
Score = 31.9 bits (69), Expect = 2.9
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Frame = +2
Query: 68 QVRGISIKLQEEERERRDNYVPEVSA--LEHDIIEVDPDTKDMLKMLDF--NNINGLQLT 235
QVR + KL E ERE +N+V E +A LE D + D + + +DF ++N +
Sbjct: 152 QVRSLRGKLTEREREEVENFVTEAAASLLERDPMAYISDVEYPEEGIDFYIGSLNAARKL 211
Query: 236 QPATQGGYGG 265
YGG
Sbjct: 212 ARRLVDAYGG 221
>UniRef50_Q10LQ3 Cluster: Expressed protein; n=6; Oryza sativa|Rep:
Expressed protein - Oryza sativa subsp. japonica (Rice)
Length = 544
Score = 31.5 bits (68), Expect = 3.8
Identities = 19/60 (31%), Positives = 35/60 (58%)
Frame = +2
Query: 26 AGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLD 205
A +++HL+RR+ + K Q EE ++ + + + LEHD+I + +T D+LK L+
Sbjct: 41 AAWSSHLIRRMFAPP----NPKEQSEESKQPVDIKEQAAQLEHDLIIKEKETLDVLKELE 96
>UniRef50_Q8TUZ3 Cluster: 30S ribosomal protein S17e; n=6;
Archaea|Rep: 30S ribosomal protein S17e - Methanopyrus
kandleri
Length = 70
Score = 31.5 bits (68), Expect = 3.8
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +2
Query: 2 TKPLRNKIAGFATHLMRRLRHSQVRG 79
TK LRN IAG+ THLMR + G
Sbjct: 43 TKKLRNMIAGYVTHLMRLKERQREEG 68
>UniRef50_P54026 Cluster: 30S ribosomal protein S17e; n=11; cellular
organisms|Rep: 30S ribosomal protein S17e -
Methanococcus jannaschii
Length = 62
Score = 31.5 bits (68), Expect = 3.8
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +2
Query: 2 TKPLRNKIAGFATHLMRRLR 61
TK LRN+IAG+ TH MR+L+
Sbjct: 43 TKRLRNRIAGYITHKMRQLQ 62
>UniRef50_UPI000065E659 Cluster: Probable RNA-binding protein 25
(RNA-binding motif protein 25) (RNA- binding
region-containing protein 7) (Protein S164).; n=1;
Takifugu rubripes|Rep: Probable RNA-binding protein 25
(RNA-binding motif protein 25) (RNA- binding
region-containing protein 7) (Protein S164). - Takifugu
rubripes
Length = 661
Score = 30.7 bits (66), Expect = 6.7
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +2
Query: 44 LMRRLRHSQVRGISIKLQEEERER---RDNYVPEVSALEHDIIEVDPDTKDMLK 196
L RR H R + Q++ERER D+ V E E+D E +P+TK LK
Sbjct: 371 LRRREHHRGSRSHRDRRQDQERERPAHTDHEVEEGEEEEYDNDEDNPETKPCLK 424
>UniRef50_Q2B171 Cluster: Post-translocation molecular chaperone;
n=1; Bacillus sp. NRRL B-14911|Rep: Post-translocation
molecular chaperone - Bacillus sp. NRRL B-14911
Length = 289
Score = 30.7 bits (66), Expect = 6.7
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +2
Query: 95 QEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLD 205
++E +E DNY PE+ A H ++E + K++ K LD
Sbjct: 129 EKEVKEYYDNYKPEIKA-RHILVEDEKTAKEVKKKLD 164
>UniRef50_Q1F0E9 Cluster: Chemotaxis sensory transducer precursor;
n=1; Clostridium oremlandii OhILAs|Rep: Chemotaxis
sensory transducer precursor - Clostridium oremlandii
OhILAs
Length = 533
Score = 30.7 bits (66), Expect = 6.7
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +2
Query: 74 RGISIKLQEEER--ERRDNYVPEVSALEHDIIEVDPDTKDMLKMLD 205
RG S+ +E + E +N+ E+S + D+IE + D++K LD
Sbjct: 382 RGFSVVAEEVRKLAEESNNFTQEISTVVVDLIEKTENAVDIIKQLD 427
>UniRef50_A0QLA0 Cluster: Methyltransferase, putative, family
protein; n=10; Mycobacterium|Rep: Methyltransferase,
putative, family protein - Mycobacterium avium (strain
104)
Length = 320
Score = 30.7 bits (66), Expect = 6.7
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -1
Query: 142 RHFWDIVVTPLTLLFLKFDRDSSHLRVSETP 50
RH WD+ VTP L ++DR H TP
Sbjct: 273 RHGWDVTVTPAPELMARYDRRPPHDIEDATP 303
>UniRef50_Q95YE6 Cluster: Ligase protein 4; n=2; Caenorhabditis|Rep:
Ligase protein 4 - Caenorhabditis elegans
Length = 741
Score = 30.7 bits (66), Expect = 6.7
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +3
Query: 6 SLLGIKLLDLPHI**GVSDT--RKCEESLSNFRKRSVRGVTTMSQKCL 143
SL GI++ L G S+T RKCEE L +F V+G+T ++ C+
Sbjct: 641 SLTGIEVAVLQ----GTSETIRRKCEEILKHFDATVVKGITPSTKLCI 684
>UniRef50_Q17A26 Cluster: Heterogeneous nuclear ribonucleoprotein;
n=1; Aedes aegypti|Rep: Heterogeneous nuclear
ribonucleoprotein - Aedes aegypti (Yellowfever mosquito)
Length = 948
Score = 30.7 bits (66), Expect = 6.7
Identities = 20/45 (44%), Positives = 26/45 (57%)
Frame = +2
Query: 53 RLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKD 187
RLRHS V+ SI QE E E D+Y P + ++ EV PD K+
Sbjct: 368 RLRHSVVKIESITDQEFE-EAVDSYRPGYEEVPNNWKEVSPDRKE 411
>UniRef50_A0C569 Cluster: Chromosome undetermined scaffold_15, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_15,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1270
Score = 30.7 bits (66), Expect = 6.7
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +2
Query: 14 RNKI-AGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDM 190
RNK+ A + + + + Q R IKL+EEER RR N + E + + V + K +
Sbjct: 64 RNKVYAEYQDVVPSQSKAEQERAARIKLREEERLRRKNGLGSAYEQEKERLPVQLEQKLL 123
Query: 191 LKMLDFNN 214
+ NN
Sbjct: 124 QNLNQMNN 131
>UniRef50_UPI000023F2A2 Cluster: hypothetical protein FG05967.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG05967.1 - Gibberella zeae PH-1
Length = 365
Score = 30.3 bits (65), Expect = 8.9
Identities = 16/54 (29%), Positives = 23/54 (42%)
Frame = +2
Query: 95 QEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPATQGG 256
+E+E+ERR N +E+D D+L+ GLQ A Q G
Sbjct: 187 EEDEKERRSNAALSTYVATKTALELDQKAVDLLEQATATMTAGLQQVDKALQSG 240
>UniRef50_A1ZCW0 Cluster: Putative uncharacterized protein; n=1;
Microscilla marina ATCC 23134|Rep: Putative
uncharacterized protein - Microscilla marina ATCC 23134
Length = 129
Score = 30.3 bits (65), Expect = 8.9
Identities = 21/72 (29%), Positives = 36/72 (50%)
Frame = -1
Query: 283 NLLITPATIATLGSWLC*LQAINIVEVQHLQHILGVGVYFDDVMFESRHFWDIVVTPLTL 104
NL T+ + S+LC + I++ + +Q + VG + D E HF + V L+L
Sbjct: 4 NLFKKADTLGIISSFLCLIHCISLPILVSIQPV--VGKFID----EELHFLEYVFVGLSL 57
Query: 103 LFLKFDRDSSHL 68
+ + F SSH+
Sbjct: 58 IAVYFATRSSHV 69
>UniRef50_Q54WY1 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1303
Score = 30.3 bits (65), Expect = 8.9
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +2
Query: 56 LRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNIN 220
L + + I I++Q E ER+ N S HD D+ D + +LD+NN N
Sbjct: 1111 LSQNNIEDIKIEIQTEADERQ-NVDALSSEGNHDDASSTDDSDDQMFLLDYNNEN 1164
>UniRef50_A2F4D0 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 405
Score = 30.3 bits (65), Expect = 8.9
Identities = 17/78 (21%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Frame = +2
Query: 5 KPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSA---LEHDIIEVDP 175
+P+ + G L +R++ + + +K + EE +++ E S LE + + P
Sbjct: 116 RPVTARTGGDIRQLEKRIQELEKKNAELKKENEENKKKLRAKSESSQSKDLEEKLFLLLP 175
Query: 176 DTKDMLKMLDFNNINGLQ 229
D KD+++ + N+ +Q
Sbjct: 176 DEKDIVEASESGNLKAVQ 193
>UniRef50_A3LY64 Cluster: Predicted protein; n=1; Pichia
stipitis|Rep: Predicted protein - Pichia stipitis
(Yeast)
Length = 578
Score = 30.3 bits (65), Expect = 8.9
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +2
Query: 95 QEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQ 238
+E+E E + E A + +++EV+ LK LD N +N + + +
Sbjct: 250 EEDEDEEDEEDKAEADASKEEVVEVEKIEAPQLKSLDDNEVNDINIEE 297
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 288,974,306
Number of Sequences: 1657284
Number of extensions: 5010970
Number of successful extensions: 15539
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 15204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15529
length of database: 575,637,011
effective HSP length: 76
effective length of database: 449,683,427
effective search space used: 10342718821
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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