Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8j02
         (301 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M18000-1|AAA60285.1|  135|Homo sapiens RPS17 protein.                 130   6e-31
M13932-1|AAA60284.1|  135|Homo sapiens RPS17 protein.                 130   6e-31
BC071928-1|AAH71928.1|  135|Homo sapiens ribosomal protein S17 p...   130   6e-31
BC070222-1|AAH70222.1|  135|Homo sapiens ribosomal protein S17 p...   130   6e-31
BC062715-1|AAH62715.1|  135|Homo sapiens ribosomal protein S17 p...   130   6e-31
BC049824-1|AAH49824.1|  135|Homo sapiens ribosomal protein S17 p...   130   6e-31
BC022370-1|AAH22370.1|  135|Homo sapiens ribosomal protein S17 p...   130   6e-31
BC019899-1|AAH19899.1|  135|Homo sapiens ribosomal protein S17 p...   130   6e-31
BC009407-1|AAH09407.1|  135|Homo sapiens ribosomal protein S17 p...   130   6e-31
AK026570-1|BAB15501.1|  135|Homo sapiens atory regulatory compon...   130   6e-31
AL049693-2|CAB89564.1|  135|Homo sapiens protein ( Human DNA seq...   121   4e-28
BC128593-1|AAI28594.1|  405|Homo sapiens CCDC4 protein protein.        29   2.0  
BC128592-1|AAI28593.1|  312|Homo sapiens CCDC4 protein protein.        29   2.0  
AK125953-1|BAC86359.1|  416|Homo sapiens protein ( Homo sapiens ...    29   2.0  
AB126829-1|BAD93192.1|  437|Homo sapiens hypothetical protein pr...    29   2.0  
AB126828-1|BAD93191.1|  530|Homo sapiens hypothetical protein pr...    29   2.0  
M81886-1|AAA58395.1|  906|Homo sapiens glutamate receptor type 1...    29   2.7  
M55543-1|AAA67323.1|  591|Homo sapiens guanylate binding protein...    29   2.7  
CR457062-1|CAG33343.1|  591|Homo sapiens GBP2 protein.                 29   2.7  
BC073163-1|AAH73163.1|  591|Homo sapiens guanylate binding prote...    29   2.7  
AL832451-1|CAD89925.1|  591|Homo sapiens hypothetical protein pr...    29   2.7  
M64752-1|AAA58613.1|  907|Homo sapiens glutamate receptor subuni...    28   4.7  
BC111734-1|AAI11735.1|  906|Homo sapiens glutamate receptor, ion...    28   4.7  
AB209094-1|BAD92331.1|  833|Homo sapiens glutamate receptor, ion...    28   4.7  
X58633-1|CAA41491.1|  906|Homo sapiens glutamate receptor GLUR1 ...    27   8.2  

>M18000-1|AAA60285.1|  135|Homo sapiens RPS17 protein.
          Length = 135

 Score =  130 bits (315), Expect = 6e-31
 Identities = 59/80 (73%), Positives = 72/80 (90%)
 Frame = +2

Query: 2   TKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDT 181
           +K LRNKIAG+ THLM+R++   VRGISIKLQEEERERRDNYVPEVSAL+ +IIEVDPDT
Sbjct: 43  SKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDT 102

Query: 182 KDMLKMLDFNNINGLQLTQP 241
           K+MLK+LDF +++ LQ+TQP
Sbjct: 103 KEMLKLLDFGSLSNLQVTQP 122


>M13932-1|AAA60284.1|  135|Homo sapiens RPS17 protein.
          Length = 135

 Score =  130 bits (315), Expect = 6e-31
 Identities = 59/80 (73%), Positives = 72/80 (90%)
 Frame = +2

Query: 2   TKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDT 181
           +K LRNKIAG+ THLM+R++   VRGISIKLQEEERERRDNYVPEVSAL+ +IIEVDPDT
Sbjct: 43  SKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDT 102

Query: 182 KDMLKMLDFNNINGLQLTQP 241
           K+MLK+LDF +++ LQ+TQP
Sbjct: 103 KEMLKLLDFGSLSNLQVTQP 122


>BC071928-1|AAH71928.1|  135|Homo sapiens ribosomal protein S17
           protein.
          Length = 135

 Score =  130 bits (315), Expect = 6e-31
 Identities = 59/80 (73%), Positives = 72/80 (90%)
 Frame = +2

Query: 2   TKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDT 181
           +K LRNKIAG+ THLM+R++   VRGISIKLQEEERERRDNYVPEVSAL+ +IIEVDPDT
Sbjct: 43  SKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDT 102

Query: 182 KDMLKMLDFNNINGLQLTQP 241
           K+MLK+LDF +++ LQ+TQP
Sbjct: 103 KEMLKLLDFGSLSNLQVTQP 122


>BC070222-1|AAH70222.1|  135|Homo sapiens ribosomal protein S17
           protein.
          Length = 135

 Score =  130 bits (315), Expect = 6e-31
 Identities = 59/80 (73%), Positives = 72/80 (90%)
 Frame = +2

Query: 2   TKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDT 181
           +K LRNKIAG+ THLM+R++   VRGISIKLQEEERERRDNYVPEVSAL+ +IIEVDPDT
Sbjct: 43  SKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDT 102

Query: 182 KDMLKMLDFNNINGLQLTQP 241
           K+MLK+LDF +++ LQ+TQP
Sbjct: 103 KEMLKLLDFGSLSNLQVTQP 122


>BC062715-1|AAH62715.1|  135|Homo sapiens ribosomal protein S17
           protein.
          Length = 135

 Score =  130 bits (315), Expect = 6e-31
 Identities = 59/80 (73%), Positives = 72/80 (90%)
 Frame = +2

Query: 2   TKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDT 181
           +K LRNKIAG+ THLM+R++   VRGISIKLQEEERERRDNYVPEVSAL+ +IIEVDPDT
Sbjct: 43  SKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDT 102

Query: 182 KDMLKMLDFNNINGLQLTQP 241
           K+MLK+LDF +++ LQ+TQP
Sbjct: 103 KEMLKLLDFGSLSNLQVTQP 122


>BC049824-1|AAH49824.1|  135|Homo sapiens ribosomal protein S17
           protein.
          Length = 135

 Score =  130 bits (315), Expect = 6e-31
 Identities = 59/80 (73%), Positives = 72/80 (90%)
 Frame = +2

Query: 2   TKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDT 181
           +K LRNKIAG+ THLM+R++   VRGISIKLQEEERERRDNYVPEVSAL+ +IIEVDPDT
Sbjct: 43  SKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDT 102

Query: 182 KDMLKMLDFNNINGLQLTQP 241
           K+MLK+LDF +++ LQ+TQP
Sbjct: 103 KEMLKLLDFGSLSNLQVTQP 122


>BC022370-1|AAH22370.1|  135|Homo sapiens ribosomal protein S17
           protein.
          Length = 135

 Score =  130 bits (315), Expect = 6e-31
 Identities = 59/80 (73%), Positives = 72/80 (90%)
 Frame = +2

Query: 2   TKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDT 181
           +K LRNKIAG+ THLM+R++   VRGISIKLQEEERERRDNYVPEVSAL+ +IIEVDPDT
Sbjct: 43  SKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDT 102

Query: 182 KDMLKMLDFNNINGLQLTQP 241
           K+MLK+LDF +++ LQ+TQP
Sbjct: 103 KEMLKLLDFGSLSNLQVTQP 122


>BC019899-1|AAH19899.1|  135|Homo sapiens ribosomal protein S17
           protein.
          Length = 135

 Score =  130 bits (315), Expect = 6e-31
 Identities = 59/80 (73%), Positives = 72/80 (90%)
 Frame = +2

Query: 2   TKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDT 181
           +K LRNKIAG+ THLM+R++   VRGISIKLQEEERERRDNYVPEVSAL+ +IIEVDPDT
Sbjct: 43  SKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDT 102

Query: 182 KDMLKMLDFNNINGLQLTQP 241
           K+MLK+LDF +++ LQ+TQP
Sbjct: 103 KEMLKLLDFGSLSNLQVTQP 122


>BC009407-1|AAH09407.1|  135|Homo sapiens ribosomal protein S17
           protein.
          Length = 135

 Score =  130 bits (315), Expect = 6e-31
 Identities = 59/80 (73%), Positives = 72/80 (90%)
 Frame = +2

Query: 2   TKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDT 181
           +K LRNKIAG+ THLM+R++   VRGISIKLQEEERERRDNYVPEVSAL+ +IIEVDPDT
Sbjct: 43  SKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDT 102

Query: 182 KDMLKMLDFNNINGLQLTQP 241
           K+MLK+LDF +++ LQ+TQP
Sbjct: 103 KEMLKLLDFGSLSNLQVTQP 122


>AK026570-1|BAB15501.1|  135|Homo sapiens atory regulatory component
           Gs of adenylyl  protein.
          Length = 135

 Score =  130 bits (315), Expect = 6e-31
 Identities = 59/80 (73%), Positives = 72/80 (90%)
 Frame = +2

Query: 2   TKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDT 181
           +K LRNKIAG+ THLM+R++   VRGISIKLQEEERERRDNYVPEVSAL+ +IIEVDPDT
Sbjct: 43  SKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDT 102

Query: 182 KDMLKMLDFNNINGLQLTQP 241
           K+MLK+LDF +++ LQ+TQP
Sbjct: 103 KEMLKLLDFGSLSNLQVTQP 122


>AL049693-2|CAB89564.1|  135|Homo sapiens protein ( Human DNA
           sequence from clone RP4-753D5 on chromosome 6p12.1-12.3 
           Contains the 3' end of the TFAP2B gene for transcription
           factor AP-2 sium/caltranscription factor AP-2 beta
           (activating enhancer binding protein 2 beta)).
          Length = 135

 Score =  121 bits (292), Expect = 4e-28
 Identities = 54/80 (67%), Positives = 68/80 (85%)
 Frame = +2

Query: 2   TKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDT 181
           +K L NK AG+ THLM++++   VRGISIKLQEE RERRDNYVPE+SAL+ +IIEVDPDT
Sbjct: 43  SKKLHNKTAGYVTHLMKQIQRGPVRGISIKLQEEVRERRDNYVPEISALDQEIIEVDPDT 102

Query: 182 KDMLKMLDFNNINGLQLTQP 241
           K+MLK+LDF  ++ LQ+TQP
Sbjct: 103 KEMLKLLDFGGLSNLQVTQP 122


>BC128593-1|AAI28594.1|  405|Homo sapiens CCDC4 protein protein.
          Length = 405

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 10/37 (27%), Positives = 21/37 (56%)
 Frame = +2

Query: 95  QEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLD 205
           +EEE E  + Y P    LE ++I +  + +++ + L+
Sbjct: 183 EEEEEEDEEGYCPRCQELEQEVISLQQENEELRRKLE 219


>BC128592-1|AAI28593.1|  312|Homo sapiens CCDC4 protein protein.
          Length = 312

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 10/37 (27%), Positives = 21/37 (56%)
 Frame = +2

Query: 95  QEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLD 205
           +EEE E  + Y P    LE ++I +  + +++ + L+
Sbjct: 183 EEEEEEDEEGYCPRCQELEQEVISLQQENEELRRKLE 219


>AK125953-1|BAC86359.1|  416|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43965 fis, clone TESTI4017001. ).
          Length = 416

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 10/37 (27%), Positives = 21/37 (56%)
 Frame = +2

Query: 95  QEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLD 205
           +EEE E  + Y P    LE ++I +  + +++ + L+
Sbjct: 234 EEEEEEDEEGYCPRCQELEQEVISLQQENEELRRKLE 270


>AB126829-1|BAD93192.1|  437|Homo sapiens hypothetical protein
           protein.
          Length = 437

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 10/37 (27%), Positives = 21/37 (56%)
 Frame = +2

Query: 95  QEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLD 205
           +EEE E  + Y P    LE ++I +  + +++ + L+
Sbjct: 308 EEEEEEDEEGYCPRCQELEQEVISLQQENEELRRKLE 344


>AB126828-1|BAD93191.1|  530|Homo sapiens hypothetical protein
           protein.
          Length = 530

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 10/37 (27%), Positives = 21/37 (56%)
 Frame = +2

Query: 95  QEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLD 205
           +EEE E  + Y P    LE ++I +  + +++ + L+
Sbjct: 308 EEEEEEDEEGYCPRCQELEQEVISLQQENEELRRKLE 344


>M81886-1|AAA58395.1|  906|Homo sapiens glutamate receptor type 1
           protein.
          Length = 906

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = +2

Query: 29  GFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDII 163
           G    + R L+  +  G++  +Q  E+ RR NY   V  ++HD I
Sbjct: 332 GQGIDIQRALQQVRFEGLTGNVQFNEKGRRTNYTLHVIEMKHDSI 376


>M55543-1|AAA67323.1|  591|Homo sapiens guanylate binding protein
           isoform II protein.
          Length = 591

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 13/46 (28%), Positives = 27/46 (58%)
 Frame = +2

Query: 53  RLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDM 190
           +L   Q + +++KLQE+ER  ++ +  E   L+ DI ++   +K +
Sbjct: 539 QLMAEQEKTLALKLQEQERLLKEGFENESKRLQKDIWDIQMRSKSL 584


>CR457062-1|CAG33343.1|  591|Homo sapiens GBP2 protein.
          Length = 591

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 13/46 (28%), Positives = 27/46 (58%)
 Frame = +2

Query: 53  RLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDM 190
           +L   Q + +++KLQE+ER  ++ +  E   L+ DI ++   +K +
Sbjct: 539 QLMAEQEKTLALKLQEQERLLKEGFENESKRLQKDIWDIQMRSKSL 584


>BC073163-1|AAH73163.1|  591|Homo sapiens guanylate binding protein
           2, interferon-inducible protein.
          Length = 591

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 13/46 (28%), Positives = 27/46 (58%)
 Frame = +2

Query: 53  RLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDM 190
           +L   Q + +++KLQE+ER  ++ +  E   L+ DI ++   +K +
Sbjct: 539 QLMAEQEKTLALKLQEQERLLKEGFENESKRLQKDIWDIQMRSKSL 584


>AL832451-1|CAD89925.1|  591|Homo sapiens hypothetical protein
           protein.
          Length = 591

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 13/46 (28%), Positives = 27/46 (58%)
 Frame = +2

Query: 53  RLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDM 190
           +L   Q + +++KLQE+ER  ++ +  E   L+ DI ++   +K +
Sbjct: 539 QLMAEQEKTLALKLQEQERLLKEGFENESKRLQKDIWDIQMRSKSL 584


>M64752-1|AAA58613.1|  907|Homo sapiens glutamate receptor subunit
           protein.
          Length = 907

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = +2

Query: 29  GFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHD 157
           G    + R L+  +  G++  +Q  E+ RR NY   V  ++HD
Sbjct: 332 GQGIDIQRALQQVRFEGLTGNVQFNEKGRRTNYTLHVIEMKHD 374


>BC111734-1|AAI11735.1|  906|Homo sapiens glutamate receptor,
           ionotropic, AMPA 1 protein.
          Length = 906

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = +2

Query: 29  GFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHD 157
           G    + R L+  +  G++  +Q  E+ RR NY   V  ++HD
Sbjct: 332 GQGIDIQRALQQVRFEGLTGNVQFNEKGRRTNYTLHVIEMKHD 374


>AB209094-1|BAD92331.1|  833|Homo sapiens glutamate receptor,
           ionotropic, AMPA 1 variant protein.
          Length = 833

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = +2

Query: 29  GFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHD 157
           G    + R L+  +  G++  +Q  E+ RR NY   V  ++HD
Sbjct: 259 GQGIDIQRALQQVRFEGLTGNVQFNEKGRRTNYTLHVIEMKHD 301


>X58633-1|CAA41491.1|  906|Homo sapiens glutamate receptor GLUR1
           protein.
          Length = 906

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = +2

Query: 29  GFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHD 157
           G    + R L+     G++  +Q  E+ RR NY   V  ++HD
Sbjct: 332 GQGIDIQRALQQVAFEGLTGNVQFNEKGRRTNYTLHVIEMKHD 374


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,126,347
Number of Sequences: 237096
Number of extensions: 786568
Number of successful extensions: 2538
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 2436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2535
length of database: 76,859,062
effective HSP length: 76
effective length of database: 58,839,766
effective search space used: 1353314618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)