Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8j02
         (301 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M22142-1|AAA28869.1|  131|Drosophila melanogaster protein ( D.me...   148   1e-36
BT001651-1|AAN71406.1|  131|Drosophila melanogaster RE44119p pro...   148   1e-36
AJ271817-3|CAB72251.1|  131|Drosophila melanogaster ribosomal pr...   148   1e-36
AE014296-1654|AAF50272.1|  131|Drosophila melanogaster CG3922-PB...   148   1e-36
BT003804-1|AAO41487.1|  226|Drosophila melanogaster AT13886p pro...    26   7.7  
AY122173-1|AAM52685.1|  872|Drosophila melanogaster LD33103p pro...    26   7.7  
AE014298-2751|AAF48870.1|  757|Drosophila melanogaster CG6659-PB...    26   7.7  
AE014298-2750|AAF48869.1|  872|Drosophila melanogaster CG6659-PA...    26   7.7  
AE013599-625|AAM68859.1|  226|Drosophila melanogaster CG30376-PA...    26   7.7  

>M22142-1|AAA28869.1|  131|Drosophila melanogaster protein (
           D.melanogaster ribosomalprotein S17 gene, complete cds.
           ).
          Length = 131

 Score =  148 bits (359), Expect = 1e-36
 Identities = 71/82 (86%), Positives = 75/82 (91%)
 Frame = +2

Query: 2   TKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDT 181
           TKPLRNKIAG+ THLM RLRHSQVRGISIKLQEEERERRDNYVP VSALE DIIEVD DT
Sbjct: 43  TKPLRNKIAGYVTHLMGRLRHSQVRGISIKLQEEERERRDNYVPAVSALEQDIIEVDADT 102

Query: 182 KDMLKMLDFNNINGLQLTQPAT 247
           K+MLK+LDF+NI GLQLTQP T
Sbjct: 103 KEMLKLLDFHNIRGLQLTQPNT 124


>BT001651-1|AAN71406.1|  131|Drosophila melanogaster RE44119p
           protein.
          Length = 131

 Score =  148 bits (359), Expect = 1e-36
 Identities = 71/82 (86%), Positives = 75/82 (91%)
 Frame = +2

Query: 2   TKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDT 181
           TKPLRNKIAG+ THLM RLRHSQVRGISIKLQEEERERRDNYVP VSALE DIIEVD DT
Sbjct: 43  TKPLRNKIAGYVTHLMGRLRHSQVRGISIKLQEEERERRDNYVPAVSALEQDIIEVDADT 102

Query: 182 KDMLKMLDFNNINGLQLTQPAT 247
           K+MLK+LDF+NI GLQLTQP T
Sbjct: 103 KEMLKLLDFHNIRGLQLTQPNT 124


>AJ271817-3|CAB72251.1|  131|Drosophila melanogaster ribosomal
           protein S17 protein.
          Length = 131

 Score =  148 bits (359), Expect = 1e-36
 Identities = 71/82 (86%), Positives = 75/82 (91%)
 Frame = +2

Query: 2   TKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDT 181
           TKPLRNKIAG+ THLM RLRHSQVRGISIKLQEEERERRDNYVP VSALE DIIEVD DT
Sbjct: 43  TKPLRNKIAGYVTHLMGRLRHSQVRGISIKLQEEERERRDNYVPAVSALEQDIIEVDADT 102

Query: 182 KDMLKMLDFNNINGLQLTQPAT 247
           K+MLK+LDF+NI GLQLTQP T
Sbjct: 103 KEMLKLLDFHNIRGLQLTQPNT 124


>AE014296-1654|AAF50272.1|  131|Drosophila melanogaster CG3922-PB
           protein.
          Length = 131

 Score =  148 bits (359), Expect = 1e-36
 Identities = 71/82 (86%), Positives = 75/82 (91%)
 Frame = +2

Query: 2   TKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDT 181
           TKPLRNKIAG+ THLM RLRHSQVRGISIKLQEEERERRDNYVP VSALE DIIEVD DT
Sbjct: 43  TKPLRNKIAGYVTHLMGRLRHSQVRGISIKLQEEERERRDNYVPAVSALEQDIIEVDADT 102

Query: 182 KDMLKMLDFNNINGLQLTQPAT 247
           K+MLK+LDF+NI GLQLTQP T
Sbjct: 103 KEMLKLLDFHNIRGLQLTQPNT 124


>BT003804-1|AAO41487.1|  226|Drosophila melanogaster AT13886p
           protein.
          Length = 226

 Score = 26.2 bits (55), Expect = 7.7
 Identities = 18/50 (36%), Positives = 26/50 (52%)
 Frame = +2

Query: 8   PLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHD 157
           P RN +   A +  RR R+ +   +S   Q +E E+R +  PE  A EHD
Sbjct: 92  PRRNNVVA-AQNAARR-RNFKSAQVSQYQQRQEEEQRLDGDPEAKAEEHD 139


>AY122173-1|AAM52685.1|  872|Drosophila melanogaster LD33103p
           protein.
          Length = 872

 Score = 26.2 bits (55), Expect = 7.7
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +2

Query: 92  LQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKML 202
           L EE+RER   YV E    EH +   D  +K+  K L
Sbjct: 432 LTEEQRERARKYVLEDFIEEHFVSMSDMSSKETEKQL 468


>AE014298-2751|AAF48870.1|  757|Drosophila melanogaster CG6659-PB,
           isoform B protein.
          Length = 757

 Score = 26.2 bits (55), Expect = 7.7
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +2

Query: 92  LQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKML 202
           L EE+RER   YV E    EH +   D  +K+  K L
Sbjct: 317 LTEEQRERARKYVLEDFIEEHFVSMSDMSSKETEKQL 353


>AE014298-2750|AAF48869.1|  872|Drosophila melanogaster CG6659-PA,
           isoform A protein.
          Length = 872

 Score = 26.2 bits (55), Expect = 7.7
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +2

Query: 92  LQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKML 202
           L EE+RER   YV E    EH +   D  +K+  K L
Sbjct: 432 LTEEQRERARKYVLEDFIEEHFVSMSDMSSKETEKQL 468


>AE013599-625|AAM68859.1|  226|Drosophila melanogaster CG30376-PA
           protein.
          Length = 226

 Score = 26.2 bits (55), Expect = 7.7
 Identities = 18/50 (36%), Positives = 26/50 (52%)
 Frame = +2

Query: 8   PLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHD 157
           P RN +   A +  RR R+ +   +S   Q +E E+R +  PE  A EHD
Sbjct: 92  PRRNNVVA-AQNAARR-RNFKSAQVSQYQQRQEEEQRLDGDPEAKAEEHD 139


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,927,987
Number of Sequences: 53049
Number of extensions: 236513
Number of successful extensions: 831
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 828
length of database: 24,988,368
effective HSP length: 73
effective length of database: 21,115,791
effective search space used: 549010566
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)