Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8i24
         (705 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.0  
AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    23   2.4  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    23   2.4  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    23   2.4  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +1

Query: 610  FDNRLQNYISFFKSKGVGVINA 675
            FDN+    ++ +KSKG+ V+ A
Sbjct: 1878 FDNKFYEKVTAYKSKGIKVLVA 1899



 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +1

Query: 610  FDNRLQNYISFFKSKGVGV 666
            FDN+    ++ +K+KG+ V
Sbjct: 1453 FDNQFYKRVTGYKAKGIKV 1471


>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 16/52 (30%), Positives = 22/52 (42%)
 Frame = +1

Query: 238 KVIGKALVGVPRDSYYIGSKVGRYDKDTLKMFDFSAEKTAAGLDNTLSLLGL 393
           KV   ALV V    Y++GSK          M  F  +   AG ++   L G+
Sbjct: 45  KVKPSALVSVKCKPYHVGSKFLLIGDAAHAMVPFYGQGMNAGFEDCFLLDGI 96


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 16/52 (30%), Positives = 22/52 (42%)
 Frame = +1

Query: 238 KVIGKALVGVPRDSYYIGSKVGRYDKDTLKMFDFSAEKTAAGLDNTLSLLGL 393
           KV   ALV V    Y++GSK          M  F  +   AG ++   L G+
Sbjct: 278 KVKPSALVSVKCKPYHVGSKFLLIGDAAHAMVPFYGQGMNAGFEDCFLLDGI 329


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 16/52 (30%), Positives = 22/52 (42%)
 Frame = +1

Query: 238 KVIGKALVGVPRDSYYIGSKVGRYDKDTLKMFDFSAEKTAAGLDNTLSLLGL 393
           KV   ALV V    Y++GSK          M  F  +   AG ++   L G+
Sbjct: 278 KVKPSALVSVKCKPYHVGSKFLLIGDAAHAMVPFYGQGMNAGFEDCFLLDGI 329


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,150
Number of Sequences: 336
Number of extensions: 2993
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)