Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8i24
(705 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00033-13|AAC48300.1| 439|Caenorhabditis elegans Mechanosensory... 147 8e-36
U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical pr... 39 0.003
Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical pr... 39 0.004
U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical pr... 33 0.20
Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical pr... 31 0.80
U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical pr... 31 0.80
Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical pr... 31 1.1
U23484-5|AAK93844.1| 590|Caenorhabditis elegans Hypothetical pr... 27 9.9
>U00033-13|AAC48300.1| 439|Caenorhabditis elegans Mechanosensory
abnormality protein14 protein.
Length = 439
Score = 147 bits (356), Expect = 8e-36
Identities = 68/163 (41%), Positives = 104/163 (63%), Gaps = 2/163 (1%)
Frame = +1
Query: 52 MRYNELGTTGIKVSHISVGSAAFSNIYGKYDEKRSLELIKESLNLGINYLETGPWYGQGS 231
M Y ++ T I++S I G+AA ++G ++ +++++ ++ GINY++TG WY Q
Sbjct: 83 MNYRQIPGTDIRMSKIGFGAAAIGGMFGNVEDS-IIKIVETAIKQGINYIDTGYWYSQSR 141
Query: 232 SEKVIGKALVGVPRDSYYIGSKVGRYDKDTLKMFDFSAEKTAAGLDNTLSLLGLDYVDL- 408
SE ++GKAL +PR +YYI +KVGR++ D + FDF A+K L N+L L L Y+D+
Sbjct: 142 SESILGKALSKIPRKAYYISTKVGRFELDYARTFDFRADKILESLTNSLKRLQLTYIDIC 201
Query: 409 -IQVHDITFAPDTSVVLKETLPVLEQAVRDGKARFIGIADYDI 534
+Q+HD FAP+ S+VL ETL LE A GK R IG+ Y +
Sbjct: 202 YVQIHDADFAPNESIVLYETLQALEMAKSSGKIRHIGLTGYPL 244
>U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical
protein C01G5.5 protein.
Length = 287
Score = 39.1 bits (87), Expect = 0.003
Identities = 40/147 (27%), Positives = 67/147 (45%), Gaps = 14/147 (9%)
Frame = +1
Query: 133 GKYDEK--RSLELIKESLNLGINYLETGPWYGQGSSEKVIGKALVGV-PR-----DSYYI 288
G Y+ K + + E+L +G +T +Y +EK +G AL + PR + Y+
Sbjct: 16 GTYEAKGDQLFAAVDEALKVGYRSFDTAKYY---ENEKDLGLALKTLLPRHNICSEDIYL 72
Query: 289 GSKVGRYDKDTLKMFDFSAEKTAAGLDNTLSLLGLDYVDLIQVH------DITFAPDTSV 450
SKV Y +AE ++ +L LL Y+DL+ VH + +
Sbjct: 73 TSKVFPYSSKN------AAELIRKDVNESLELLDRKYLDLVLVHYPRPLDTEDLNENNKM 126
Query: 451 VLKETLPVLEQAVRDGKARFIGIADYD 531
K+T LE+ +GK R IG+++Y+
Sbjct: 127 YRKDTWIALEKLHAEGKIRSIGVSNYE 153
>Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical
protein K07C5.2 protein.
Length = 301
Score = 38.7 bits (86), Expect = 0.004
Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 14/137 (10%)
Frame = +1
Query: 166 IKESLNLGINYLETGPWYGQGSSEKVIGKAL------VGVPRDSYYIGSKVGRYDKDTLK 327
I+ +L G +T Y +E +G +L G+ R+ +I +KV +++T+
Sbjct: 40 IEAALKSGYRQFDTANLY---KNETFLGNSLKKYLPQFGLTREDVFITTKVRTLNENTV- 95
Query: 328 MFDFSAEKTAAGLDNTLSLLGLDYVDLIQVH---DITFAPDTSVVL-----KETLPVLEQ 483
E+T L N+L+ L DYVDL+ +H D D + K LE+
Sbjct: 96 ------EETEKQLANSLATLQTDYVDLLLIHYPRDRDTGNDDDYEINKSRRKIVWQTLEK 149
Query: 484 AVRDGKARFIGIADYDI 534
A G+ R IG+++Y++
Sbjct: 150 AKESGRVRSIGVSNYEV 166
>U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical
protein T08H10.1 protein.
Length = 333
Score = 33.1 bits (72), Expect = 0.20
Identities = 35/154 (22%), Positives = 67/154 (43%), Gaps = 19/154 (12%)
Frame = +1
Query: 142 DEKRSLELIKESLNLGINYLETGPWYGQGSSEKVIGKALVGVPRDSYYIGSKVGRYDKDT 321
DE ++ +L+ G ++T Y +E +IGK L Y K+ R D
Sbjct: 26 DEAELTVALRAALDAGYRLIDTAHLY---QNEHIIGKVL-----HEYISSGKLKREDIFV 77
Query: 322 LKMFDFSA---EKTAAGLDNTLSLLGLDYVDLIQVH--------DITFAP--------DT 444
F+A E +++ L L L+Y+DL +H + +FAP T
Sbjct: 78 TSKLPFTAHAPEDVPKCVESQLKALQLEYIDLYLIHCPFPFKHQEGSFAPLMENGELAVT 137
Query: 445 SVVLKETLPVLEQAVRDGKARFIGIADYDIDLMK 546
+ +T LE+ ++GK + +G++++ + ++
Sbjct: 138 EIAHIDTWRALEKLYKEGKLKALGVSNFSCNQLQ 171
>Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical
protein F53F1.2 protein.
Length = 297
Score = 31.1 bits (67), Expect = 0.80
Identities = 35/135 (25%), Positives = 57/135 (42%), Gaps = 12/135 (8%)
Frame = +1
Query: 166 IKESLNLGINYLETGPWYGQGSSEKVIGKALV------GVPRDSYYIGSKVGRYDKDTLK 327
I +L G +T +Y +EK +G+AL G+ R ++ SK K+
Sbjct: 40 IDAALTAGYRMFDTAKYY---LNEKELGEALKILLPKHGLSRSDVFLTSKFFPESKNC-- 94
Query: 328 MFDFSAEKTAAGLDNTLSLLGLDYVDLIQVH------DITFAPDTSVVLKETLPVLEQAV 489
E ++ +L L DY+D+ VH + + K VLE+A
Sbjct: 95 -----REACRGFVEESLQSLQTDYIDMYLVHYPKPNDSDNDDVNNAEYRKIAYEVLEEAK 149
Query: 490 RDGKARFIGIADYDI 534
GK R IG+++Y+I
Sbjct: 150 AAGKVRSIGVSNYEI 164
>U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical
protein C35D10.6 protein.
Length = 287
Score = 31.1 bits (67), Expect = 0.80
Identities = 28/133 (21%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Frame = +1
Query: 160 ELIKESLNLGINYLETGPWYG-QGSSEKVIGKALV--GVPRDSYYIGSKVGRYDKDTLKM 330
++I G +++T Y + +++ K L G+ R+ +I SK L
Sbjct: 29 QVIDAGFKEGYRFIDTAQVYNNEAKIGRILEKLLPANGLKREDIWITSK--------LAP 80
Query: 331 FDFSAEKTAAGLDNTLSLLGLDYVDLIQVHDITFA-----PDTSVVLKETLPVLEQAVRD 495
+ +K ++ +LS L ++Y+DL+ +H + P + E+ V+ + + +
Sbjct: 81 SNAGVKKARESIEESLSNLKVEYLDLLLIHWPGSSLKSENPANKKLRVESWNVMCEMMAE 140
Query: 496 GKARFIGIADYDI 534
GK R +G+++++I
Sbjct: 141 GKLRSVGVSNFEI 153
>Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical
protein F53F1.3 protein.
Length = 283
Score = 30.7 bits (66), Expect = 1.1
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 8/134 (5%)
Frame = +1
Query: 157 LELIKESLNLGINYLETGPWYGQGSSEKVIGKAL-VGVPRDSYYIGSKVGRYDKD-TLKM 330
L ++ +L G +T Y ++EK IG AL + +P+ + + R D T KM
Sbjct: 27 LPVLDAALTAGYRLFDTAKVY---NNEKEIGDALEILLPKHN------LKREDIFITTKM 77
Query: 331 FDFSAEKTAAGLDNTLSLLGLDYVDLIQVH-DITFAPDTSVVLKETLPV-----LEQAVR 492
+ E +D +LSLL Y+D+ +H +F + +TL + L +
Sbjct: 78 HPNTVENVKKLVDESLSLLKTSYIDMYLIHYPKSFDYGDQDPMNKTLRIATWNDLWECKN 137
Query: 493 DGKARFIGIADYDI 534
GK R +G++ ++I
Sbjct: 138 AGKIRSVGVSSFEI 151
>U23484-5|AAK93844.1| 590|Caenorhabditis elegans Hypothetical
protein EEED8.16 protein.
Length = 590
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -1
Query: 171 FNELQASFLVIFPIDIAESGTSNTNVRNFDTGCTEL 64
FN+L++ +F +D E TSN + DT TEL
Sbjct: 222 FNDLESYCCTLFFVDRIECTTSNDLFSSDDTSLTEL 257
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,632,661
Number of Sequences: 27780
Number of extensions: 287002
Number of successful extensions: 787
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 785
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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