Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8i18
(696 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_41644| Best HMM Match : Tetraspannin (HMM E-Value=0) 63 2e-10
SB_15887| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 2e-08
SB_46721| Best HMM Match : Tetraspannin (HMM E-Value=4e-35) 56 4e-08
SB_1751| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_26670| Best HMM Match : Tetraspannin (HMM E-Value=1.09301e-43) 54 1e-07
SB_23554| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 3e-07
SB_22250| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 7e-05
SB_31428| Best HMM Match : Tetraspannin (HMM E-Value=0) 44 9e-05
SB_23555| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 9e-05
SB_58401| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_22249| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 40 0.003
SB_2984| Best HMM Match : Tetraspannin (HMM E-Value=9e-06) 40 0.003
SB_47590| Best HMM Match : TSP_3 (HMM E-Value=7.6e-09) 38 0.006
SB_14527| Best HMM Match : SAP (HMM E-Value=1.6e-13) 37 0.018
SB_31427| Best HMM Match : Tetraspannin (HMM E-Value=0) 36 0.024
SB_31429| Best HMM Match : Tetraspannin (HMM E-Value=5.9e-35) 36 0.031
SB_36515| Best HMM Match : UPF0126 (HMM E-Value=0.73) 35 0.055
SB_6741| Best HMM Match : WD40 (HMM E-Value=0) 33 0.17
SB_46036| Best HMM Match : PSRT (HMM E-Value=1) 32 0.39
SB_58028| Best HMM Match : zf-C4 (HMM E-Value=0) 31 0.67
SB_52135| Best HMM Match : RCSD (HMM E-Value=4.8) 31 0.89
SB_12629| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_4587| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_23671| Best HMM Match : Tetraspannin (HMM E-Value=6.6e-38) 29 2.7
SB_8348| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_22636| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_29137| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_20246| Best HMM Match : RVT_1 (HMM E-Value=1.4e-30) 28 6.3
SB_4913| Best HMM Match : CBF (HMM E-Value=2.9) 28 6.3
SB_37671| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_35792| Best HMM Match : His_leader (HMM E-Value=3.5) 28 6.3
SB_32709| Best HMM Match : Spectrin (HMM E-Value=8.8) 28 6.3
SB_24041| Best HMM Match : rve (HMM E-Value=9.7e-08) 28 6.3
SB_23051| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_59267| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_56230| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_44575| Best HMM Match : DUF444 (HMM E-Value=0.84) 28 8.3
SB_35301| Best HMM Match : ABC_tran (HMM E-Value=0) 28 8.3
>SB_41644| Best HMM Match : Tetraspannin (HMM E-Value=0)
Length = 252
Score = 62.9 bits (146), Expect = 2e-10
Identities = 30/98 (30%), Positives = 48/98 (48%)
Frame = +2
Query: 260 PWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXXFTYGESIKE 439
P + IV+G V ++AFL CCGA++ES CM+ TY + Y E I++
Sbjct: 59 PILCIVIGIVTVIVAFLACCGALKESQCMLGTYFGLVTAIFCLEVTAIVLAYVYRERIEK 118
Query: 440 SIMDGVGVLFKKRSDANADEAAEAVFSELQRQFECCGN 553
++ + + + D A+ E+ R F+CCGN
Sbjct: 119 NLHGDIRSTMNEYHLSGHDAVTRAI-DEIHRDFKCCGN 155
>SB_15887| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 56.4 bits (130), Expect = 2e-08
Identities = 35/134 (26%), Positives = 61/134 (45%)
Frame = +2
Query: 272 IVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXXFTYGESIKESIMD 451
I+VG +MF++ F GC GA+RE+ C++ ++ F + + ++ I++
Sbjct: 51 IIVGGIMFILGFSGCIGALRENICLLKFFSVVLAIIFFLQLALGVFVFVFQDKVEAVIVE 110
Query: 452 GVGVLFKKRSDANADEAAEAVFSELQRQFECCGNTGAINYGQFTLPESCCVKKSILSTFA 631
+ K D NAD + + +Q++F+CCG G IN + +C S
Sbjct: 111 KLQTAVTKYRD-NAD--LQNLIDGVQQEFKCCGAKG-INDWDKNIYFNCSSPGSEACGVP 166
Query: 632 GNNCTVDAANPGCG 673
+ C D N CG
Sbjct: 167 YSCCIKDTINRQCG 180
>SB_46721| Best HMM Match : Tetraspannin (HMM E-Value=4e-35)
Length = 642
Score = 55.6 bits (128), Expect = 4e-08
Identities = 35/123 (28%), Positives = 53/123 (43%), Gaps = 6/123 (4%)
Frame = +2
Query: 257 GPWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXXFTYGESIK 436
G + I VG ++ +IAF GCCGA +E+ CM++ + + + I+
Sbjct: 406 GSRLLIAVGCIITIIAFFGCCGAWKENKCMLILFFILLLIVLGLEIAAAVLGYINKDKIQ 465
Query: 437 ESIMDGVGVLFKKRSDANADEAAEAVFSELQRQFECCGNTGAIN---YGQFTL---PESC 598
+ D + K+ N +A +Q FECCG G + YGQ P SC
Sbjct: 466 SDLTDDIIRNIKEYPKNN-----KAAIDAMQMDFECCGAKGPSDWTFYGQMKYKAGPGSC 520
Query: 599 CVK 607
C K
Sbjct: 521 CGK 523
>SB_1751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 341
Score = 53.6 bits (123), Expect = 1e-07
Identities = 33/154 (21%), Positives = 64/154 (41%), Gaps = 7/154 (4%)
Frame = +2
Query: 230 DLLKTHLAVGPWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXX 409
++ + A GP + I VG ++ ++AFLGCCGA +E+ CM++ +
Sbjct: 44 EIASVNYATGPRVVIAVGFIIALVAFLGCCGAWKENKCMLICFFAFLLLLLILEIVGGAL 103
Query: 410 XFTYGESIKESIMDGVGVLFKKRSDANADEAAEAVFSELQRQFECCGNTGAINY------ 571
+ + I+ + + ++ N E +++Q +F+CCG ++
Sbjct: 104 AYNNKDKIENRLDKDI-----LKAIENYPGKNEKSINDMQTKFKCCGADNYTDWQSNIKM 158
Query: 572 -GQFTLPESCCVKKSILSTFAGNNCTVDAANPGC 670
++P+SCC + G D GC
Sbjct: 159 KNSSSVPDSCCKSEKAGCGVGGVKDPKDIYTKGC 192
>SB_26670| Best HMM Match : Tetraspannin (HMM E-Value=1.09301e-43)
Length = 211
Score = 53.6 bits (123), Expect = 1e-07
Identities = 34/137 (24%), Positives = 61/137 (44%), Gaps = 16/137 (11%)
Frame = +2
Query: 251 AVGPWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXXFTY-GE 427
A G + I VG ++ +++F GC GA +E+ CM+ T+ + Y G+
Sbjct: 53 ATGSRLVIAVGVIIAIVSFFGCLGAWKENRCMLGTFFVLLLILLTLEIAAAVLAYNYRGK 112
Query: 428 S--------IKESIMDGVGVLFKKRSDANADEAAEAVFSELQRQFECCGNTGAINY---- 571
+ +K+ I + K ++ + F LQ + +CCG G +++
Sbjct: 113 NSLNSDSVKVKDEIESDLTKALKGDYGSSGQDGVTKAFDALQEKQKCCGVNGYLDWKASK 172
Query: 572 ---GQFTLPESCCVKKS 613
G T+P+SCCV K+
Sbjct: 173 KYNGTSTVPDSCCVVKA 189
>SB_23554| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 514
Score = 52.4 bits (120), Expect = 3e-07
Identities = 30/132 (22%), Positives = 57/132 (43%), Gaps = 8/132 (6%)
Frame = +2
Query: 230 DLLKTHLAVGPWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXX 409
+L G I I VGA + +++F GCCGAI+E C++ T+
Sbjct: 316 ELQSVKYITGSIIIIAVGAFIALVSFFGCCGAIKEHRCLLATFFALLFIILAVEITGTAL 375
Query: 410 XFTYGESIKESIMDGVGVLFKKRSDANADEAAEAVFSELQRQFECCGNTGAINY--GQFT 583
+ Y ++E + + + + +A + +Q++ +CCG G ++ +T
Sbjct: 376 GYVYRNKVEEQLGKDMNDTIVSYGEKGKEGITDA-YDAIQKKEKCCGINGFKDWQRSYYT 434
Query: 584 ------LPESCC 601
+P+SCC
Sbjct: 435 KGNHSIVPDSCC 446
>SB_22250| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 313
Score = 44.8 bits (101), Expect = 7e-05
Identities = 23/99 (23%), Positives = 41/99 (41%), Gaps = 1/99 (1%)
Frame = +2
Query: 266 IFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXXFTYGESIKESI 445
IF+ +G ++FVI GC GA+RE+ C++ Y F Y + ++ +
Sbjct: 106 IFLALGGLLFVITIFGCIGALRENRCLLTAYIWMCGIILAGMIVCGGLGFYYKDVLETKV 165
Query: 446 MDGV-GVLFKKRSDANADEAAEAVFSELQRQFECCGNTG 559
+ + R D + +Q + +CCG G
Sbjct: 166 TAQLKDAIVLYRDPTKGD--LHLIIDTVQTELQCCGVQG 202
>SB_31428| Best HMM Match : Tetraspannin (HMM E-Value=0)
Length = 280
Score = 44.4 bits (100), Expect = 9e-05
Identities = 25/95 (26%), Positives = 42/95 (44%)
Frame = +2
Query: 266 IFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXXFTYGESIKESI 445
IF V+G +MF I F GC GA+RE+ C + Y +T + + +++
Sbjct: 80 IFFVIGILMFFIGFFGCVGALRENTCFLTVYGTSVFLCLILLIACGAVAYTQKDKV-QAL 138
Query: 446 MDGVGVLFKKRSDANADEAAEAVFSELQRQFECCG 550
+ + KK D D + + +Q +CCG
Sbjct: 139 KERLKQDLKKYLD---DPLNQDLIDFMQTLLKCCG 170
>SB_23555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 140
Score = 44.4 bits (100), Expect = 9e-05
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = +2
Query: 230 DLLKTHLAVGPWIFIVVGAVMFVIAFLGCCGAIRESHCMV 349
DL A G I I GA++ +I+F GCCGAI+ES C++
Sbjct: 16 DLQSVKYATGYIIVIAAGALIALISFFGCCGAIKESRCLL 55
>SB_58401| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 426
Score = 42.7 bits (96), Expect = 3e-04
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +2
Query: 251 AVGPWIFIVVGAVMFVIAFLGCCGAIRESHCMVVT 355
++ W I GA + + F GCCGA++ES CM+ T
Sbjct: 311 SIPAWTMIGAGAFVTFVGFFGCCGAVKESRCMLAT 345
>SB_22249| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 296
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/95 (23%), Positives = 43/95 (45%)
Frame = +2
Query: 266 IFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXXFTYGESIKESI 445
+ ++VG ++F+IA +GC GA+RE+ ++ Y + + + + E +
Sbjct: 84 VILIVGILLFLIATVGCIGALRENTILLAIYGGAVTLCLIFLVSAGIAVYMHQDKVVEKL 143
Query: 446 MDGVGVLFKKRSDANADEAAEAVFSELQRQFECCG 550
D + K D + E + + LQ +CCG
Sbjct: 144 KDDL----KHYRDPD-KENFQFLIDRLQTNLKCCG 173
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/41 (39%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +2
Query: 236 LKTH-LAVGPWIFIVVGAVMFVIAFLGCCGAIRESHCMVVT 355
L +H A +I I +G ++ +I F+GCCGA++E C++ T
Sbjct: 208 LSSHDYATAAYILIGIGFLIAIIGFIGCCGALKEHTCLLKT 248
>SB_2984| Best HMM Match : Tetraspannin (HMM E-Value=9e-06)
Length = 187
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/41 (39%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +2
Query: 236 LKTH-LAVGPWIFIVVGAVMFVIAFLGCCGAIRESHCMVVT 355
L +H A +I I +G ++ +I F+GCCGA++E C++ T
Sbjct: 66 LSSHDYATAAYILIGIGFLIAIIGFIGCCGALKEHTCLLKT 106
>SB_47590| Best HMM Match : TSP_3 (HMM E-Value=7.6e-09)
Length = 669
Score = 38.3 bits (85), Expect = 0.006
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +2
Query: 266 IFIVVGAVMFVIAFLGCCGAIRESHCMVV 352
I I GA++ I F+GCCGA++E+ C ++
Sbjct: 201 IMIAAGALVMFIGFVGCCGAVKENKCFLL 229
Score = 27.9 bits (59), Expect = 8.3
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 10/53 (18%)
Frame = +2
Query: 485 ANADEAAEAVFSELQRQFECCGNT-GAINYGQF---------TLPESCCVKKS 613
+N ++A +AV Q F+CCG T G ++ T+PESCC KK+
Sbjct: 528 SNKEKATKAV-DRAQSIFKCCGATQGPKDWANTAWAKSNTNQTVPESCCKKKA 579
>SB_14527| Best HMM Match : SAP (HMM E-Value=1.6e-13)
Length = 347
Score = 36.7 bits (81), Expect = 0.018
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = -3
Query: 430 ALAVGEEEDADHHLHNDDHQQEDCVRDDHAVTLAYRSTASQER 302
AL GE+ + D L NDDH ++D + DD L + S+E+
Sbjct: 47 ALHEGEDVEGDDDLDNDDHDEDDVLADDSVDDLVAEESLSEEK 89
>SB_31427| Best HMM Match : Tetraspannin (HMM E-Value=0)
Length = 299
Score = 36.3 bits (80), Expect = 0.024
Identities = 20/95 (21%), Positives = 42/95 (44%)
Frame = +2
Query: 266 IFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXXFTYGESIKESI 445
+ ++VG ++F+IA +GC GA+RE+ ++ Y + + + + +
Sbjct: 84 VILIVGILLFLIATVGCIGALRENTILLAIYGGAVTLCLILLVSAGTAVYIHRDKVVAKL 143
Query: 446 MDGVGVLFKKRSDANADEAAEAVFSELQRQFECCG 550
D + + D + E + + LQ +CCG
Sbjct: 144 KDDL----QHYRDPD-KENFQFLIDRLQTNLKCCG 173
>SB_31429| Best HMM Match : Tetraspannin (HMM E-Value=5.9e-35)
Length = 286
Score = 35.9 bits (79), Expect = 0.031
Identities = 21/105 (20%), Positives = 41/105 (39%)
Frame = +2
Query: 236 LKTHLAVGPWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXXF 415
L++ + P + G +++I F GC GA++E+ + +Y F
Sbjct: 65 LQSFMLYMPTLLFFTGFSLYLIVFFGCVGALKENTLFLASYGIFIFCCLIPIIAAGVLAF 124
Query: 416 TYGESIKESIMDGVGVLFKKRSDANADEAAEAVFSELQRQFECCG 550
+E ++D L D + + +Q +F+CCG
Sbjct: 125 LQ----REKLVDPKARLEDGLKSYQQDSSKQEFIDFIQTRFKCCG 165
>SB_36515| Best HMM Match : UPF0126 (HMM E-Value=0.73)
Length = 150
Score = 35.1 bits (77), Expect = 0.055
Identities = 15/32 (46%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Frame = +2
Query: 245 HLAVGPWIFIVV-GAVMFVIAFLGCCGAIRES 337
+LA P + + + G +MFVI+F GC GA+RE+
Sbjct: 13 NLATDPAVMLAIAGVLMFVISFSGCLGALREN 44
>SB_6741| Best HMM Match : WD40 (HMM E-Value=0)
Length = 714
Score = 33.5 bits (73), Expect = 0.17
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = -3
Query: 433 DALAVGEEEDADHHLHNDDHQQEDCVRDDHAVTLAYRSTASQERDHEHY 287
DA A ++D D +DD +D DD V++ +RS E+D E Y
Sbjct: 657 DAAAAAADDDDDADDDDDDDDDDDDDDDDDLVSIMFRSCWPSEQDLEKY 705
>SB_46036| Best HMM Match : PSRT (HMM E-Value=1)
Length = 878
Score = 32.3 bits (70), Expect = 0.39
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = -3
Query: 409 EDADHHLHNDDHQQEDCVRDDHAVTLAYRSTASQERDHEHYSPDDYEDPRTDS 251
+D DHH + DH ++D V V + + +D +H+ D PR D+
Sbjct: 639 QDVDHHRQDADHHRQDVVHPRQDVVHRRQDADHRRQDADHHR-QDVVHPRQDA 690
>SB_58028| Best HMM Match : zf-C4 (HMM E-Value=0)
Length = 438
Score = 31.5 bits (68), Expect = 0.67
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -3
Query: 271 EDPRTDSKMGLQ*VFDHGPVHQERYSNP 188
+DP +DS +G+ VFDHG + E Y P
Sbjct: 5 DDPLSDSNLGIS-VFDHGSTYSEPYEIP 31
>SB_52135| Best HMM Match : RCSD (HMM E-Value=4.8)
Length = 476
Score = 31.1 bits (67), Expect = 0.89
Identities = 16/50 (32%), Positives = 20/50 (40%), Gaps = 2/50 (4%)
Frame = -3
Query: 397 HHLHNDDHQQEDCVRDDHAVTLAYRSTASQE--RDHEHYSPDDYEDPRTD 254
H H DH R DH +Y T + DH + D+ DP TD
Sbjct: 364 HSDHVTDHNDHVTGRSDHVTGHSYHVTGHNDYLTDHNDHVTTDHSDPLTD 413
>SB_12629| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = -3
Query: 430 ALAVGEEEDADHHLHNDDHQQEDCVRDDHAVTLAYRSTASQERDHEHY 287
A A +++DAD +DD +D DD V++ +RS E+D E Y
Sbjct: 380 AAADDDDDDADDD-DDDDDDDDDDDDDDDLVSIMFRSCWPSEQDLEKY 426
>SB_4587| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2656
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -3
Query: 382 DDHQQEDCVRDDHAVTLAYRSTASQERD-HEHYSPDDYEDPRT 257
DDH Q+ V ++ A+T + QE H+H+ P D + R+
Sbjct: 922 DDHSQQSNV-EEQAMTATHNRKVDQESSTHDHHMPRDVRETRS 963
>SB_23671| Best HMM Match : Tetraspannin (HMM E-Value=6.6e-38)
Length = 919
Score = 29.5 bits (63), Expect = 2.7
Identities = 9/33 (27%), Positives = 20/33 (60%)
Frame = +2
Query: 260 PWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTY 358
P + I G ++ ++ +GC I+E+ ++V+Y
Sbjct: 60 PGLMIAAGCLVIIVCVVGCVAVIKENRFILVSY 92
>SB_8348| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 292 VRDRVLGMLWSDTRESLHGRHVRNLLAGDHHCAS 393
++D V G W++ + +LH + LAGD C+S
Sbjct: 313 IQDEVQGFHWNNAKATLHPFMIYYKLAGDLQCSS 346
>SB_22636| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/62 (20%), Positives = 29/62 (46%)
Frame = -3
Query: 451 IHNALLDALAVGEEEDADHHLHNDDHQQEDCVRDDHAVTLAYRSTASQERDHEHYSPDDY 272
+ + + + +A +++D DH +DD +D DDH + + D + + D +
Sbjct: 83 MEHGIPEVMAAADDDD-DHDDDDDDDHDDDHDDDDHDDDHHHHDDDDDDHDDDDHDDDHH 141
Query: 271 ED 266
+D
Sbjct: 142 DD 143
>SB_29137| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 73
Score = 28.7 bits (61), Expect = 4.8
Identities = 22/75 (29%), Positives = 33/75 (44%)
Frame = -1
Query: 324 APQHPKNAITNITAPTTMKIHGPTARWVFSKSLTMVQFIRNATPIPTSSRPRSATTRLKK 145
APQ P+NA T I PT + P A + ++ + + T S RS L+K
Sbjct: 1 APQQPQNATTAIMTPTAINSLDPEAYSILERARVKFALLSHLPKAFTLS--RSDVILLRK 58
Query: 144 NSTYFTKLVPHPMLR 100
+ TK + + LR
Sbjct: 59 GD-FVTKTLNNDPLR 72
>SB_20246| Best HMM Match : RVT_1 (HMM E-Value=1.4e-30)
Length = 1191
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -1
Query: 195 PIPTSSRPRSATTRLKKNSTYFTKLVPHPMLRALFFISVSQ 73
PIP P + T ++K YFTK P MLR F++ + +
Sbjct: 118 PIP-GENPDNYKTVIEKFDQYFTKRDPQLMLREKFWLQLQR 157
>SB_4913| Best HMM Match : CBF (HMM E-Value=2.9)
Length = 328
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 446 MDGVGVLFKKRSDANADEAAEAVFSELQR 532
+ G+G++FK+R+ N +F ELQR
Sbjct: 55 LKGLGLMFKQRTGRNLPMTHPVIFDELQR 83
>SB_37671| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 708
Score = 28.3 bits (60), Expect = 6.3
Identities = 20/93 (21%), Positives = 41/93 (44%)
Frame = -3
Query: 544 AFELSLQFREDSLGGLVCVSVGSLFE*HADAIHNALLDALAVGEEEDADHHLHNDDHQQE 365
A E++L+ R + VS L H++ ++ + + + +D H+DD ++
Sbjct: 334 AMEMNLEDRTKGFVISLVVSEDKLPPGHSEDEYDKEHEEASKDDHQDDKEAEHHDDKDEQ 393
Query: 364 DCVRDDHAVTLAYRSTASQERDHEHYSPDDYED 266
+D+H + E +H+ DD+ED
Sbjct: 394 HDDKDEHRDD---KDDHHDEDEHDEKKGDDHED 423
>SB_35792| Best HMM Match : His_leader (HMM E-Value=3.5)
Length = 168
Score = 28.3 bits (60), Expect = 6.3
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -3
Query: 328 YRSTASQERDHEHYSPDD 275
YR T SQ R H H++PD+
Sbjct: 104 YRRTRSQLRPHHHFAPDE 121
>SB_32709| Best HMM Match : Spectrin (HMM E-Value=8.8)
Length = 230
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 446 MDGVGVLFKKRSDANADEAAEAVFSELQR 532
+ G+G++FK+R+ N +F ELQR
Sbjct: 55 LKGLGLMFKQRTGRNLPMTHPVIFDELQR 83
>SB_24041| Best HMM Match : rve (HMM E-Value=9.7e-08)
Length = 399
Score = 28.3 bits (60), Expect = 6.3
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -3
Query: 328 YRSTASQERDHEHYSPDD 275
YR T SQ R H H++PD+
Sbjct: 336 YRRTRSQLRPHHHFAPDE 353
>SB_23051| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2141
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -1
Query: 195 PIPTSSRPRSATTRLKKNSTYFTKLVPHPMLRALFFISVSQ 73
PIP P + T ++K YFTK P MLR F++ + +
Sbjct: 684 PIP-GENPDNYKTVIEKFDQYFTKRDPQLMLREKFWLQLQR 723
>SB_59267| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1444
Score = 27.9 bits (59), Expect = 8.3
Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 5/102 (4%)
Frame = -3
Query: 409 EDADHHLHNDDHQQEDCVRDDHAVTLAYRSTASQERDHEH----YSPDDYEDPRT-DSKM 245
+ H H + QQ+ ++ + R + +R+ + SP D+E +
Sbjct: 388 QQQQHQQHEE--QQQRLLKQQEGLCEQIRQLENHQREVQSNLSMLSPRDHELAEIRQHEA 445
Query: 244 GLQ*VFDHGPVHQERYSNPH*QQAEERDDQVEEE*HIFHKTR 119
+ + D +HQ +Y H +Q + DDQ IFH+ R
Sbjct: 446 QIVSLLDEQKMHQRQYEQMHQRQQQRLDDQA----RIFHRDR 483
>SB_56230| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 996
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
Frame = +1
Query: 106 HGMWNEFCEICAILLQ--PGRRAPRPAASGDWSSVPDELDHGQRLTEDPSCCRSVDLHSR 279
H W+ +L P R A P A+ + +P+ + + ++ + PSC + +
Sbjct: 159 HAPWDVLTRFAEKMLLRFPLREASPPPAAQGFDKIPELISNWSKIFDPPSCGITKEKRFV 218
Query: 280 RGCNVRDRVLGMLWSD 327
G RD+ L SD
Sbjct: 219 HGLFSRDKKDSFLISD 234
>SB_44575| Best HMM Match : DUF444 (HMM E-Value=0.84)
Length = 451
Score = 27.9 bits (59), Expect = 8.3
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = -3
Query: 217 PVHQERYSNPH*QQAEERDDQVEEE*HIFHKTRSTSHVESTIFYFCFTINTSLAVRSGHV 38
P E N ++AEE DD + EE F + S++ Y C+ + V++ V
Sbjct: 151 PPEMEEDDNTEDEEAEEDDDFMSEEEPEFQPSAEESYLSEDEEYNCW---KNPLVQTKTV 207
Query: 37 GTAFSV 20
GT SV
Sbjct: 208 GTCISV 213
>SB_35301| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 618
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = -3
Query: 421 VGEEEDADHHLHNDDHQQEDCVRDDHAVTLAYRSTASQERDHEHYSPDDYED 266
V EEE + +DD+ +D +D TL TA + R YS D +D
Sbjct: 537 VSEEECHKGVVDDDDNDDDDDDENDVRKTLLGSETADENRGESVYSFHDADD 588
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,044,117
Number of Sequences: 59808
Number of extensions: 398007
Number of successful extensions: 1679
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1444
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1634
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1817559367
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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