Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8i17
(514 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_11654| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_54209| Best HMM Match : Baculo_11_kDa (HMM E-Value=8) 28 3.9
SB_39546| Best HMM Match : FCH (HMM E-Value=8e-13) 28 3.9
SB_26266| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 28 3.9
SB_56721| Best HMM Match : DUF755 (HMM E-Value=0.52) 27 6.9
SB_46550| Best HMM Match : Asn_synthase (HMM E-Value=0) 27 6.9
SB_11395| Best HMM Match : 7tm_1 (HMM E-Value=6.3e-06) 27 6.9
SB_4753| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_39413| Best HMM Match : GED (HMM E-Value=0.81) 27 6.9
SB_30431| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_8182| Best HMM Match : ATP-synt_E (HMM E-Value=1.8) 27 6.9
SB_4152| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_1884| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_20974| Best HMM Match : GED (HMM E-Value=0.42) 27 9.1
>SB_11654| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1161
Score = 28.7 bits (61), Expect = 3.0
Identities = 20/82 (24%), Positives = 41/82 (50%)
Frame = -3
Query: 431 SVTITWIVLS*TLPKKSNTLTVSILFNLILVSLACIGSNRLRAPTD*VDKIFKLSVLLGV 252
S+ + W+VL+ +L TV+ +F ++++ + L D K+ +L V
Sbjct: 904 SLGLIWVVLNFSLKGNEKAYTVATIFGVVIIIFRFL---TLSGKHD----TLKMLMLTVV 956
Query: 251 MSLINNDAAV*EAVVLMVCNMS 186
MSL+ + + V+LM+ ++S
Sbjct: 957 MSLVKSFFTIAVLVILMIVDIS 978
>SB_54209| Best HMM Match : Baculo_11_kDa (HMM E-Value=8)
Length = 337
Score = 28.3 bits (60), Expect = 3.9
Identities = 21/78 (26%), Positives = 39/78 (50%)
Frame = -2
Query: 483 ISKYNAIALIVTDDAHLLCNYHLDRVVVNAPQKV*HVDRFDSIQLNFGLVGLHRFQQIAR 304
++ + + AL T A C H ++ A ++ + R +++ +N L + + QQIAR
Sbjct: 107 LTNWTSAALRFTKHAQGNCEIHKFSMI--AIEEFKKIMRTEAVPINLQLNNIVQ-QQIAR 163
Query: 303 SDRLSRQNF*TFSFIGRN 250
+ + R F T F G+N
Sbjct: 164 NREILRSLFKTIIFCGKN 181
>SB_39546| Best HMM Match : FCH (HMM E-Value=8e-13)
Length = 360
Score = 28.3 bits (60), Expect = 3.9
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +1
Query: 205 NTTASQTAASLLINDITPNKTESLKILSTQSVGARNLLEPMQANETKIKLNRIET 369
NT+ + A L++ND+T K + L TQ + + + + KI+ + +ET
Sbjct: 296 NTSTNLKANKLMVNDLTGEKLQHKNTLLTQELQIIDQQLEHKIRDLKIEKDNLET 350
>SB_26266| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 1038
Score = 28.3 bits (60), Expect = 3.9
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +1
Query: 205 NTTASQTAASLLINDITPNKTESLKILSTQSVGARNLLEPMQANETKIKLNRIET 369
NT+ + A L++ND+T K + L TQ + + + + KI+ + +ET
Sbjct: 244 NTSTNLKANKLMVNDLTGEKLQHKNTLLTQELQIIDQQLEHKIRDLKIEKDNLET 298
>SB_56721| Best HMM Match : DUF755 (HMM E-Value=0.52)
Length = 516
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = -2
Query: 393 PQKV*HVDRFDSIQLNFGLVGLHRFQQIARSDRLSRQNF*TFSFIGRN 250
P++ + R D++ +N L + + QQIAR+ + R F T F G+N
Sbjct: 312 PEEFKKMMRTDAVPINLQLNNIVQ-QQIARNREILRSLFKTIIFCGKN 358
>SB_46550| Best HMM Match : Asn_synthase (HMM E-Value=0)
Length = 1663
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 232 SLLINDITPNKTESLKILSTQSVGARNLLEPMQ 330
S LI+D+TP T ++ + S+G EP +
Sbjct: 1027 STLIDDLTPGATYQFRVSANNSIGISRPSEPFE 1059
>SB_11395| Best HMM Match : 7tm_1 (HMM E-Value=6.3e-06)
Length = 672
Score = 27.5 bits (58), Expect = 6.9
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +3
Query: 174 NGGRRHVANHQHHGLSNGRVVVN 242
N G+R+V + QH G +N RV+++
Sbjct: 597 NEGQRYVISGQHSGTTNKRVIID 619
>SB_4753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 596
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = -2
Query: 393 PQKV*HVDRFDSIQLNFGLVGLHRFQQIARSDRLSRQNF*TFSFIGRN 250
P++ + R D++ +N L + + QQIAR+ + R F T F G+N
Sbjct: 42 PEEFKKMMRTDAVPINLQLNNIVQ-QQIARNREILRSLFKTIIFCGKN 88
>SB_39413| Best HMM Match : GED (HMM E-Value=0.81)
Length = 300
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = -2
Query: 393 PQKV*HVDRFDSIQLNFGLVGLHRFQQIARSDRLSRQNF*TFSFIGRN 250
P++ + R D++ +N L + + QQIAR+ + R F T F G+N
Sbjct: 42 PEEFKKMMRTDAVPINLQLNNIVQ-QQIARNREILRSLFKTIIFCGKN 88
>SB_30431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 107
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = -2
Query: 393 PQKV*HVDRFDSIQLNFGLVGLHRFQQIARSDRLSRQNF*TFSFIGRN 250
P++ + R D++ +N L + + QQIAR+ + R F T F G+N
Sbjct: 42 PEEFKKMMRTDAVPINLQLNNIVQ-QQIARNREILRSLFKTIIFCGKN 88
>SB_8182| Best HMM Match : ATP-synt_E (HMM E-Value=1.8)
Length = 520
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = -2
Query: 393 PQKV*HVDRFDSIQLNFGLVGLHRFQQIARSDRLSRQNF*TFSFIGRN 250
P++ + R D++ +N L + + QQIAR+ + R F T F G+N
Sbjct: 325 PEEFKKMMRTDAVPINLQLNNIVQ-QQIARNREILRSLFKTIIFCGKN 371
>SB_4152| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 66
Score = 27.5 bits (58), Expect = 6.9
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +3
Query: 138 QQTAGKPFGANANGGRRH 191
+Q+ G+P G + NGGR H
Sbjct: 8 EQSTGRPVGGSVNGGRLH 25
>SB_1884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 107
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = -2
Query: 393 PQKV*HVDRFDSIQLNFGLVGLHRFQQIARSDRLSRQNF*TFSFIGRN 250
P++ + R D++ +N L + + QQIAR+ + R F T F G+N
Sbjct: 42 PEEFKKMMRTDAVPINLQLNNIVQ-QQIARNREILRSLFKTIIFCGKN 88
>SB_20974| Best HMM Match : GED (HMM E-Value=0.42)
Length = 207
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = -2
Query: 393 PQKV*HVDRFDSIQLNFGLVGLHRFQQIARSDRLSRQNF*TFSFIGRN 250
P++ + R D++ +N L + + QQIAR+ + R F T F G+N
Sbjct: 42 PKEFKKMMRTDAVPINLQLNNIVQ-QQIARNREILRSLFKTIIFCGKN 88
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.316 0.128 0.351
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,537,290
Number of Sequences: 59808
Number of extensions: 288454
Number of successful extensions: 777
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 777
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1136110413
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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