Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8i07
         (762 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q54ID6 Cluster: Putative uncharacterized protein; n=1; ...    34   3.3  
UniRef50_A4IXJ6 Cluster: Methylated-DNA--protein-cysteine methyl...    34   4.4  
UniRef50_Q4Y3B1 Cluster: Putative uncharacterized protein; n=1; ...    34   4.4  
UniRef50_A7AVQ6 Cluster: Variant erythrocyte surface antigen-1, ...    33   5.8  
UniRef50_Q4H2K9 Cluster: Zinc finger protein; n=1; Ciona intesti...    33   7.7  
UniRef50_A5K5F1 Cluster: Tryptophan-rich antigen; n=1; Plasmodiu...    33   7.7  
UniRef50_A2EVM0 Cluster: Putative uncharacterized protein; n=1; ...    33   7.7  

>UniRef50_Q54ID6 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 1437

 Score = 34.3 bits (75), Expect = 3.3
 Identities = 18/41 (43%), Positives = 25/41 (60%)
 Frame = +1

Query: 1   EEEELCTVEKVCESAKKDMEALDLVFKNADNSESLKQIQNE 123
           EEE+  + EK+CE A   M  LD++FK   N +S  Q+ NE
Sbjct: 861 EEEKEMSFEKICEKATISMVFLDILFK---NDQSRAQVLNE 898


>UniRef50_A4IXJ6 Cluster: Methylated-DNA--protein-cysteine
           methyltransferase family protein; n=11; Francisella
           tularensis|Rep: Methylated-DNA--protein-cysteine
           methyltransferase family protein - Francisella
           tularensis subsp. tularensis (strain WY96-3418)
          Length = 190

 Score = 33.9 bits (74), Expect = 4.4
 Identities = 12/37 (32%), Positives = 23/37 (62%)
 Frame = -1

Query: 315 YFLDLALVFSSSKRMKLWNSKVQANLDNIATQVNDSM 205
           +F+  + ++S  K +K++N+K+  N DNI  Q  D +
Sbjct: 47  FFISDSNIYSIEKLLKIYNAKISFNADNITNQTKDQL 83


>UniRef50_Q4Y3B1 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 1136

 Score = 33.9 bits (74), Expect = 4.4
 Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
 Frame = +1

Query: 22  VEKVCESAKKDMEALDLV-FKNADNSESLKQIQNETRFLCASTSFMKENDNNIFK*YKVL 198
           VEK  +  +K + ALD++ F N + +    ++      + +S + MK+N  NIFK +K +
Sbjct: 119 VEKYLDIFEKHLNALDIIKFLNKEINHEENKLNININIIISSKNNMKKNVLNIFKIFKYI 178

Query: 199 I 201
           I
Sbjct: 179 I 179


>UniRef50_A7AVQ6 Cluster: Variant erythrocyte surface antigen-1,
           alpha subunit; n=4; Babesia bovis|Rep: Variant
           erythrocyte surface antigen-1, alpha subunit - Babesia
           bovis
          Length = 1309

 Score = 33.5 bits (73), Expect = 5.8
 Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
 Frame = +1

Query: 28  KVCESAKKDMEALDLVFKNADN--SESLKQIQNETRFLCASTSFMKENDNNIFK*YKVLI 201
           K+ E+  K  E L L+ +  +   +E  K I +ET+F+    S +   DN I    K +I
Sbjct: 744 KISEAINKVREVLKLMKEGVEKQKTEDRKDIVDETKFVVGEISGLSLTDNKIESVLKQVI 803

Query: 202 KHAVINLCGYVVKVCLNFAIPQLH 273
            H  I L   +  +      P+ H
Sbjct: 804 SHEYITLLNAINNLLSICNSPKCH 827


>UniRef50_Q4H2K9 Cluster: Zinc finger protein; n=1; Ciona
           intestinalis|Rep: Zinc finger protein - Ciona
           intestinalis (Transparent sea squirt)
          Length = 750

 Score = 33.1 bits (72), Expect = 7.7
 Identities = 17/68 (25%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
 Frame = +1

Query: 46  KKDMEALDLVFKNADNSESLKQIQNETRFLCASTSFMKENDNNIFK*YKVL--IKHAVIN 219
           +++M A +      D S  +   +NE +F+C+  S    N  N+ K +++   +K  V +
Sbjct: 426 RRNMVAHERTCPGVDESGKMNPTKNEEKFVCSVCSKQLSNKRNLEKHFEIHLDVKPFVCD 485

Query: 220 LCGYVVKV 243
           LCG+  ++
Sbjct: 486 LCGHSTRL 493


>UniRef50_A5K5F1 Cluster: Tryptophan-rich antigen; n=1; Plasmodium
           vivax|Rep: Tryptophan-rich antigen - Plasmodium vivax
          Length = 457

 Score = 33.1 bits (72), Expect = 7.7
 Identities = 11/38 (28%), Positives = 23/38 (60%)
 Frame = +2

Query: 2   KKRNYVLWKRFVNQQKKTWKHWILYLKMRIIVSR*NKF 115
           K+R +  WK  V  +K+ W++W+   + R+I ++  K+
Sbjct: 325 KRRKWQTWKNRVTSEKQEWENWVKIKEERVIYNKYKKW 362


>UniRef50_A2EVM0 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 497

 Score = 33.1 bits (72), Expect = 7.7
 Identities = 20/75 (26%), Positives = 35/75 (46%)
 Frame = -1

Query: 336 VKFGQNKYFLDLALVFSSSKRMKLWNSKVQANLDNIATQVNDSMLY*HFISFKNIIIVFF 157
           +++G ++  L   +     ++MK W  K+    DN++  V    +Y HFI +  I  V  
Sbjct: 217 MEYGDDEVLLTPYVPHDVFEKMKSWQLKI----DNLSIDVKCKKIYEHFIQYGPIFSVNI 272

Query: 156 HK*CTCTQKSCFILN 112
            K  +CT    F+ N
Sbjct: 273 FKKGSCTAYILFMAN 287


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 665,648,119
Number of Sequences: 1657284
Number of extensions: 12821499
Number of successful extensions: 28839
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 27041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28811
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 63381147830
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)