Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8h22
         (634 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   6.5  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   6.5  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   8.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   8.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   8.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   8.6  

>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 179 YALKLPEHNNGGEF 220
           Y  +LP+ NN G F
Sbjct: 372 YIFRLPDENNNGGF 385


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 12/46 (26%), Positives = 21/46 (45%)
 Frame = +2

Query: 413 LPRTLRTARPVAFPDFYMATIKFNEKRNVFIYLQFKHISNYTKILW 550
           LP  +     ++F   +    +F    NV +  +FK I+N  + LW
Sbjct: 168 LPNVILACHMLSFLMVHQGETQF-VAANVILKTRFKTINNILENLW 212


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = -2

Query: 339  TDAESSVFLPLYREESLIFPPWV 271
            TD+E+   +P  + + L+ P W+
Sbjct: 1193 TDSETVSTVPQNKRDDLVNPYWI 1215


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = -2

Query: 339  TDAESSVFLPLYREESLIFPPWV 271
            TD+E+   +P  + + L+ P W+
Sbjct: 1193 TDSETVSTVPQNKRDDLVNPYWI 1215


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = -2

Query: 339  TDAESSVFLPLYREESLIFPPWV 271
            TD+E+   +P  + + L+ P W+
Sbjct: 1193 TDSETVSTVPQNKRDDLVNPYWI 1215


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = -2

Query: 339  TDAESSVFLPLYREESLIFPPWV 271
            TD+E+   +P  + + L+ P W+
Sbjct: 1193 TDSETVSTVPQNKRDDLVNPYWI 1215


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,633
Number of Sequences: 336
Number of extensions: 3502
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)