Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8h22
         (634 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0978 - 29856872-29858023                                         29   3.1  
07_03_0203 + 15138864-15140452,15140629-15140726,15141924-151422...    29   4.1  
07_03_0207 - 15183894-15184685,15184993-15185078,15186042-151861...    27   9.4  
05_01_0160 + 1081416-1081647,1081840-1082012,1082169-1082246,108...    27   9.4  

>04_04_0978 - 29856872-29858023
          Length = 383

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -1

Query: 436 CCPQGTGKDDTNEIVILHTGHAQSCSER 353
           C P  TG D+T+E+V++  G    C E+
Sbjct: 217 CAPGETGGDNTHEVVVVMDGLENLCEEQ 244


>07_03_0203 + 15138864-15140452,15140629-15140726,15141924-15142235,
            15142437-15142749,15144025-15146023,15147033-15147068
          Length = 1448

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = -1

Query: 322  GFPPAVQGRKSNFSSLGTDKCACALVSTSALTHLKFSAIVVLG 194
            G  P V+    NF++ G +KC    +    LT LK   + VLG
Sbjct: 1339 GAMPQVERLSLNFAADGWNKCNSEAIGIERLTELKEICVQVLG 1381


>07_03_0207 -
           15183894-15184685,15184993-15185078,15186042-15186144,
           15186890-15186971,15187112-15187203,15187295-15187383,
           15187467-15187547,15188610-15188724,15188894-15188935
          Length = 493

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +3

Query: 348 KDLSEQDWACPVCKITISLV 407
           KD+  + W CP+C+  I+ +
Sbjct: 468 KDIESKKWGCPICRAKINQI 487


>05_01_0160 +
           1081416-1081647,1081840-1082012,1082169-1082246,
           1082372-1082529,1082558-1082709,1083232-1083290,
           1083633-1083912,1084235-1084470,1084601-1084744,
           1084845-1085012
          Length = 559

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 16/47 (34%), Positives = 21/47 (44%)
 Frame = -1

Query: 502 KYVSFFIKFNSSHIEIGESNGSCCPQGTGKDDTNEIVILHTGHAQSC 362
           KY S   K   SH+++  S   CC  G  K  TN   +    H +SC
Sbjct: 365 KYASKLQKHEESHVKLDYSEVICCEPGCMKAFTNLECL--KAHNKSC 409


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,231,551
Number of Sequences: 37544
Number of extensions: 365141
Number of successful extensions: 854
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 835
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 854
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1549385732
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)